RNA–Protein interactions for RNA: ENST00000484636.1

C2-213, Transcript of complement C2, humanhuman

TSL 4

Gene C2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2-213ENST00000484636 NISCHQ9Y2I1 1504 aa36.98■■■■□ 3.51
C2-213ENST00000484636 ABCC9O60706 1549 aa34.57■■■■□ 3.12
C2-213ENST00000484636 CCDC180Q9P1Z9 1646 aa33.66■■■□□ 2.98
C2-213ENST00000484636 DNAJC5BQ9UF47 199 aa33.24■■■□□ 2.91
C2-213ENST00000484636 RB1CC1Q8TDY2 1594 aa32.51■■■□□ 2.79
C2-213ENST00000484636 PABPN1Q86U42 306 aaKnown RBP eCLIP32.03■■■□□ 2.72
C2-213ENST00000484636 NACADO15069 1562 aa32.02■■■□□ 2.72
C2-213ENST00000484636 UNC13AQ9UPW8 1703 aa31.82■■■□□ 2.68
C2-213ENST00000484636 DCAF8L2P0C7V8 631 aa31.72■■■□□ 2.67
C2-213ENST00000484636 BICRAQ9NZM4 1560 aa31.55■■■□□ 2.64
C2-213ENST00000484636 DNAJC5Q9H3Z4 198 aa31.27■■■□□ 2.6
C2-213ENST00000484636 CECR2Q9BXF3 1484 aa31.25■■■□□ 2.59
C2-213ENST00000484636 MYO15BQ96JP2 1530 aa31.23■■■□□ 2.59
C2-213ENST00000484636 CC2D2AQ9P2K1 1620 aa31.2■■■□□ 2.58
C2-213ENST00000484636 SHROOM4Q9ULL8 1493 aa31.03■■■□□ 2.56
C2-213ENST00000484636 EIF4G1Q04637 1599 aaKnown RBP30.88■■■□□ 2.53
C2-213ENST00000484636 SCRIBQ14160 1630 aa30.61■■■□□ 2.49
C2-213ENST00000484636 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
C2-213ENST00000484636 ZCCHC6Q5VYS8 1495 aaKnown RBP30.43■■■□□ 2.46
C2-213ENST00000484636 CUX2O14529 1486 aa30.2■■■□□ 2.43
C2-213ENST00000484636 ERCC6Q03468 1493 aa29.96■■■□□ 2.39
C2-213ENST00000484636 TRIM41Q8WV44 630 aa29.55■■■□□ 2.32
C2-213ENST00000484636 NCAPD3P42695 1498 aa29.55■■■□□ 2.32
C2-213ENST00000484636 NESP48681 1621 aa29.41■■■□□ 2.3
C2-213ENST00000484636 ATAD2BQ9ULI0 1458 aa29.32■■■□□ 2.28
C2-213ENST00000484636 THOC2Q8NI27 1593 aaKnown RBP29.31■■■□□ 2.28
C2-213ENST00000484636 HMGXB3Q12766 1538 aa29.26■■■□□ 2.27
C2-213ENST00000484636 SMARCA2P51531 1590 aa29.23■■■□□ 2.27
C2-213ENST00000484636 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
C2-213ENST00000484636 SMARCA4P51532 1647 aa29.09■■■□□ 2.25
C2-213ENST00000484636 KIF21AQ7Z4S6 1674 aa29.06■■■□□ 2.24
C2-213ENST00000484636 BAZ1BQ9UIG0 1483 aaKnown RBP29.03■■■□□ 2.24
C2-213ENST00000484636 PDS5BQ9NTI5 1447 aa28.94■■■□□ 2.22
C2-213ENST00000484636 BAZ1AQ9NRL2 1556 aaPredicted RBP28.8■■■□□ 2.2
C2-213ENST00000484636 PEG3Q9GZU2 1588 aa28.77■■■□□ 2.2
C2-213ENST00000484636 MRC2Q9UBG0 1479 aa28.74■■■□□ 2.19
C2-213ENST00000484636 WDR62O43379 1518 aa28.69■■■□□ 2.18
C2-213ENST00000484636 OSCARQ8IYS5 282 aa28.69■■■□□ 2.18
C2-213ENST00000484636 CADPSQ9ULU8 1353 aa28.62■■■□□ 2.17
C2-213ENST00000484636 MROH2BQ7Z745 1585 aa28.48■■■□□ 2.15
C2-213ENST00000484636 CEP164Q9UPV0 1460 aa28.45■■■□□ 2.14
C2-213ENST00000484636 RIMBP3CA6NJZ7 1639 aa28.42■■■□□ 2.14
C2-213ENST00000484636 RIMBP3BA6NNM3 1639 aa28.42■■■□□ 2.14
C2-213ENST00000484636 RIMBP3Q9UFD9 1639 aa28.42■■■□□ 2.14
C2-213ENST00000484636 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
C2-213ENST00000484636 ARHGEF11O15085 1522 aa28.2■■■□□ 2.1
C2-213ENST00000484636 WIZO95785 1651 aa28.13■■■□□ 2.09
C2-213ENST00000484636 TRHP20396 242 aaPredicted RBP28.12■■■□□ 2.09
C2-213ENST00000484636 URB2Q14146 1524 aaKnown RBP28.12■■■□□ 2.09
C2-213ENST00000484636 CFTRP13569 1480 aa28.08■■■□□ 2.09
C2-213ENST00000484636 CYB5RLQ6IPT4 315 aa28.07■■■□□ 2.08
C2-213ENST00000484636 AEBP2Q6ZN18 517 aaPredicted RBP28.05■■■□□ 2.08
C2-213ENST00000484636 ZNF608Q9ULD9 1512 aaPredicted RBP27.93■■■□□ 2.06
C2-213ENST00000484636 IFT140Q96RY7 1462 aa27.9■■■□□ 2.06
C2-213ENST00000484636 ARAP1Q96P48 1450 aa27.84■■■□□ 2.05
C2-213ENST00000484636 PRDM2Q13029 1718 aa27.83■■■□□ 2.05
C2-213ENST00000484636 CHD1O14646 1710 aa27.79■■■□□ 2.04
C2-213ENST00000484636 EIF4G3O43432 1585 aaKnown RBP27.77■■■□□ 2.04
C2-213ENST00000484636 RSF1Q96T23 1441 aaPredicted RBP27.7■■■□□ 2.03
C2-213ENST00000484636 TOP2AP11388 1531 aaKnown RBP27.68■■■□□ 2.02
C2-213ENST00000484636 TOPBP1Q92547 1522 aa27.66■■■□□ 2.02
C2-213ENST00000484636 FBLN2P98095 1184 aa27.64■■■□□ 2.02
C2-213ENST00000484636 AQRO60306 1485 aaKnown RBP eCLIP27.57■■■□□ 23e-6■■■■□ 26.1
C2-213ENST00000484636 ABCC8Q09428 1581 aa27.56■■■□□ 2
C2-213ENST00000484636 TARBP1Q13395 1621 aaKnown RBP27.49■■□□□ 1.99
C2-213ENST00000484636 DNMBPQ6XZF7 1577 aa27.49■■□□□ 1.99
C2-213ENST00000484636 CLASP1Q7Z460 1538 aa27.37■■□□□ 1.97
C2-213ENST00000484636 CCDC88BA6NC98 1476 aa27.37■■□□□ 1.97
C2-213ENST00000484636 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
C2-213ENST00000484636 POLA1P09884 1462 aaPredicted RBP27.31■■□□□ 1.96
C2-213ENST00000484636 CHMP7Q8WUX9 453 aaPredicted RBP27.27■■□□□ 1.96
C2-213ENST00000484636 SNAPC4Q5SXM2 1469 aa27.26■■□□□ 1.95
C2-213ENST00000484636 TDRD9Q8NDG6 1382 aaKnown RBP27.25■■□□□ 1.95
C2-213ENST00000484636 RAD54L2Q9Y4B4 1467 aa27.23■■□□□ 1.95
C2-213ENST00000484636 SOGA1O94964 1423 aa27.18■■□□□ 1.94
C2-213ENST00000484636 GAPVD1Q14C86 1478 aa27.18■■□□□ 1.94
C2-213ENST00000484636 WDR97A6NE52 1622 aa27.16■■□□□ 1.94
C2-213ENST00000484636 MAGI1Q96QZ7 1491 aaPredicted RBP27.16■■□□□ 1.94
C2-213ENST00000484636 SYNJ2O15056 1496 aa27.08■■□□□ 1.93
C2-213ENST00000484636 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
C2-213ENST00000484636 FGD5Q6ZNL6 1462 aa27.01■■□□□ 1.91
C2-213ENST00000484636 PBRM1Q86U86 1689 aa26.95■■□□□ 1.9
C2-213ENST00000484636 KIF13AQ9H1H9 1805 aa26.9■■□□□ 1.9
C2-213ENST00000484636 ILDR1Q86SU0 546 aaPredicted RBP26.88■■□□□ 1.89
C2-213ENST00000484636 ERCC6L2Q5T890 1561 aa26.87■■□□□ 1.89
C2-213ENST00000484636 CUX1P39880 1505 aa26.81■■□□□ 1.88
C2-213ENST00000484636 CEP170Q5SW79 1584 aa26.76■■□□□ 1.87
C2-213ENST00000484636 GRIN2AQ12879 1464 aa26.7■■□□□ 1.87
C2-213ENST00000484636 ABCA5Q8WWZ7 1642 aa26.69■■□□□ 1.86
C2-213ENST00000484636 KDM4FA0A1W2PPD8 638 aa26.66■■□□□ 1.86
C2-213ENST00000484636 SHROOM2Q13796 1616 aa26.65■■□□□ 1.86
C2-213ENST00000484636 ABCA10Q8WWZ4 1543 aa26.64■■□□□ 1.85
C2-213ENST00000484636 NUP160Q12769 1436 aa26.63■■□□□ 1.85
C2-213ENST00000484636 FAM69CQ0P6D2 419 aa26.62■■□□□ 1.85
C2-213ENST00000484636 ADAMTS12P58397 1594 aa26.58■■□□□ 1.85
C2-213ENST00000484636 ABCC10Q5T3U5 1492 aa26.56■■□□□ 1.84
C2-213ENST00000484636 KDM6BO15054 1643 aa26.56■■□□□ 1.84
C2-213ENST00000484636 NPM1P06748 294 aaKnown RBP eCLIP26.51■■□□□ 1.83
C2-213ENST00000484636 DIP2BQ9P265 1576 aa26.49■■□□□ 1.83
C2-213ENST00000484636 PRG4Q92954 1404 aaPredicted RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms