RNA–Protein interactions for RNA: ENST00000557659.5

CNIH1-206, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2

Gene CNIH1, Length 856 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-206ENST00000557659 AEBP2Q6ZN18 517 aaPredicted RBP28.4■■■□□ 2.14
CNIH1-206ENST00000557659 CHIC1Q5VXU3 224 aa28.34■■■□□ 2.13
CNIH1-206ENST00000557659 NISCHQ9Y2I1 1504 aa27.62■■■□□ 2.01
CNIH1-206ENST00000557659 PHF23Q9BUL5 403 aaPredicted RBP25.08■■□□□ 1.61
CNIH1-206ENST00000557659 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
CNIH1-206ENST00000557659 SENP3Q9H4L4 574 aaPredicted RBP23.83■■□□□ 1.41
CNIH1-206ENST00000557659 ABCC9O60706 1549 aa23.78■■□□□ 1.4
CNIH1-206ENST00000557659 PLPPR3Q6T4P5 718 aa23.24■■□□□ 1.31
CNIH1-206ENST00000557659 NACADO15069 1562 aa23.1■■□□□ 1.29
CNIH1-206ENST00000557659 RB1CC1Q8TDY2 1594 aa23.09■■□□□ 1.29
CNIH1-206ENST00000557659 MYO15BQ96JP2 1530 aa23.05■■□□□ 1.28
CNIH1-206ENST00000557659 ZCCHC6Q5VYS8 1495 aaKnown RBP23.04■■□□□ 1.28
CNIH1-206ENST00000557659 DCAF1Q9Y4B6 1507 aa22.96■■□□□ 1.27
CNIH1-206ENST00000557659 DCAF8L2P0C7V8 631 aa22.92■■□□□ 1.26
CNIH1-206ENST00000557659 UNC13AQ9UPW8 1703 aa22.45■■□□□ 1.19
CNIH1-206ENST00000557659 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
CNIH1-206ENST00000557659 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
CNIH1-206ENST00000557659 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
CNIH1-206ENST00000557659 PABPN1Q86U42 306 aaKnown RBP eCLIP22.18■■□□□ 1.14
CNIH1-206ENST00000557659 FOXD1Q16676 465 aa22.13■■□□□ 1.13
CNIH1-206ENST00000557659 PPP6R1Q9UPN7 881 aa21.89■■□□□ 1.09
CNIH1-206ENST00000557659 ADRA2BP18089 450 aa21.85■■□□□ 1.09
CNIH1-206ENST00000557659 EIF4G1Q04637 1599 aaKnown RBP21.71■■□□□ 1.07
CNIH1-206ENST00000557659 DNAJC5BQ9UF47 199 aa21.61■■□□□ 1.05
CNIH1-206ENST00000557659 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.04
CNIH1-206ENST00000557659 BAZ1AQ9NRL2 1556 aaPredicted RBP21.46■■□□□ 1.03
CNIH1-206ENST00000557659 CECR2Q9BXF3 1484 aa21.42■■□□□ 1.02
CNIH1-206ENST00000557659 SMARCA4P51532 1647 aa21.4■■□□□ 1.02
CNIH1-206ENST00000557659 SMARCA2P51531 1590 aa21.31■■□□□ 1
CNIH1-206ENST00000557659 NCAPD3P42695 1498 aa21.27■■□□□ 1
CNIH1-206ENST00000557659 PEG3Q9GZU2 1588 aa21.26■□□□□ 0.99
CNIH1-206ENST00000557659 ATAD2BQ9ULI0 1458 aa21.25■□□□□ 0.99
CNIH1-206ENST00000557659 POTEDQ86YR6 584 aa21.23■□□□□ 0.99
CNIH1-206ENST00000557659 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
CNIH1-206ENST00000557659 MROH2BQ7Z745 1585 aa21.21■□□□□ 0.99
CNIH1-206ENST00000557659 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
CNIH1-206ENST00000557659 RSF1Q96T23 1441 aaPredicted RBP21.04■□□□□ 0.96
CNIH1-206ENST00000557659 WIZO95785 1651 aa20.99■□□□□ 0.95
CNIH1-206ENST00000557659 KCNA4P22459 653 aa20.95■□□□□ 0.94
CNIH1-206ENST00000557659 PIAS4Q8N2W9 510 aaPredicted RBP20.93■□□□□ 0.94
CNIH1-206ENST00000557659 TOP2AP11388 1531 aaKnown RBP20.86■□□□□ 0.93
CNIH1-206ENST00000557659 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
CNIH1-206ENST00000557659 CADPSQ9ULU8 1353 aa20.64■□□□□ 0.89
CNIH1-206ENST00000557659 PPP4R3CPQ6ZMV5 832 aa20.6■□□□□ 0.89
CNIH1-206ENST00000557659 ERCC6Q03468 1493 aa20.58■□□□□ 0.89
CNIH1-206ENST00000557659 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
CNIH1-206ENST00000557659 NESP48681 1621 aa20.57■□□□□ 0.88
CNIH1-206ENST00000557659 CCDC88BA6NC98 1476 aa20.55■□□□□ 0.88
CNIH1-206ENST00000557659 CFTRP13569 1480 aa20.55■□□□□ 0.88
CNIH1-206ENST00000557659 SUPT5HO00267 1087 aaKnown RBP20.51■□□□□ 0.87
CNIH1-206ENST00000557659 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
CNIH1-206ENST00000557659 KIF21AQ7Z4S6 1674 aa20.41■□□□□ 0.86
CNIH1-206ENST00000557659 CUX2O14529 1486 aa20.39■□□□□ 0.85
CNIH1-206ENST00000557659 FANCD2Q9BXW9 1451 aa20.38■□□□□ 0.85
CNIH1-206ENST00000557659 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
CNIH1-206ENST00000557659 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
CNIH1-206ENST00000557659 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
CNIH1-206ENST00000557659 WDR62O43379 1518 aa20.25■□□□□ 0.83
CNIH1-206ENST00000557659 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
CNIH1-206ENST00000557659 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
CNIH1-206ENST00000557659 NCBP3Q53F19 620 aaKnown RBP20.15■□□□□ 0.82
CNIH1-206ENST00000557659 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
CNIH1-206ENST00000557659 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.81
CNIH1-206ENST00000557659 TOPBP1Q92547 1522 aa20.06■□□□□ 0.8
CNIH1-206ENST00000557659 MSH5O43196 834 aa20.02■□□□□ 0.8
CNIH1-206ENST00000557659 NPM3O75607 178 aaKnown RBP20■□□□□ 0.79
CNIH1-206ENST00000557659 SLC4A1APQ9BWU0 796 aaKnown RBP19.98■□□□□ 0.79
CNIH1-206ENST00000557659 IFT140Q96RY7 1462 aa19.96■□□□□ 0.79
CNIH1-206ENST00000557659 CUX1P39880 1505 aa19.91■□□□□ 0.78
CNIH1-206ENST00000557659 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
CNIH1-206ENST00000557659 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
CNIH1-206ENST00000557659 WDR97A6NE52 1622 aa19.85■□□□□ 0.77
CNIH1-206ENST00000557659 CNKSR2Q8WXI2 1034 aa19.85■□□□□ 0.77
CNIH1-206ENST00000557659 FGD5Q6ZNL6 1462 aa19.85■□□□□ 0.77
CNIH1-206ENST00000557659 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
CNIH1-206ENST00000557659 BIVM-ERCC5R4GMW8 1640 aa19.84■□□□□ 0.77
CNIH1-206ENST00000557659 SOGA1O94964 1423 aa19.83■□□□□ 0.76
CNIH1-206ENST00000557659 TARBP1Q13395 1621 aaKnown RBP19.83■□□□□ 0.76
CNIH1-206ENST00000557659 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
CNIH1-206ENST00000557659 CSRNP3Q8WYN3 585 aa19.78■□□□□ 0.76
CNIH1-206ENST00000557659 SYNJ1O43426 1573 aa19.75■□□□□ 0.75
CNIH1-206ENST00000557659 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
CNIH1-206ENST00000557659 ZNF608Q9ULD9 1512 aaPredicted RBP19.73■□□□□ 0.75
CNIH1-206ENST00000557659 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
CNIH1-206ENST00000557659 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
CNIH1-206ENST00000557659 AQRO60306 1485 aaKnown RBP eCLIP19.65■□□□□ 0.74
CNIH1-206ENST00000557659 TDRD9Q8NDG6 1382 aaKnown RBP19.63■□□□□ 0.73
CNIH1-206ENST00000557659 MAPK8IP2Q13387 824 aaPredicted RBP19.62■□□□□ 0.73
CNIH1-206ENST00000557659 GRIN2BQ13224 1484 aa19.61■□□□□ 0.73
CNIH1-206ENST00000557659 GAPVD1Q14C86 1478 aa19.61■□□□□ 0.73
CNIH1-206ENST00000557659 ABCA5Q8WWZ7 1642 aa19.61■□□□□ 0.73
CNIH1-206ENST00000557659 MAGI1Q96QZ7 1491 aaPredicted RBP19.59■□□□□ 0.73
CNIH1-206ENST00000557659 PBRM1Q86U86 1689 aa19.56■□□□□ 0.72
CNIH1-206ENST00000557659 DNAJC5Q9H3Z4 198 aa19.54■□□□□ 0.72
CNIH1-206ENST00000557659 ERICH3Q5RHP9 1530 aa19.52■□□□□ 0.72
CNIH1-206ENST00000557659 OSCARQ8IYS5 282 aa19.52■□□□□ 0.72
CNIH1-206ENST00000557659 SNAPC4Q5SXM2 1469 aa19.51■□□□□ 0.71
CNIH1-206ENST00000557659 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
CNIH1-206ENST00000557659 SYNJ2O15056 1496 aa19.48■□□□□ 0.71
CNIH1-206ENST00000557659 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms