RNA–Protein interactions for RNA: ENST00000556113.1

CNIH1-205, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH1, Length 523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-205ENST00000556113 AEBP2Q6ZN18 517 aaPredicted RBP26.1■■□□□ 1.77
CNIH1-205ENST00000556113 CHIC1Q5VXU3 224 aa25.4■■□□□ 1.66
CNIH1-205ENST00000556113 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
CNIH1-205ENST00000556113 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
CNIH1-205ENST00000556113 FOXD1Q16676 465 aa20.68■□□□□ 0.9
CNIH1-205ENST00000556113 PLPPR3Q6T4P5 718 aa20.6■□□□□ 0.89
CNIH1-205ENST00000556113 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
CNIH1-205ENST00000556113 ADRA2BP18089 450 aa19.58■□□□□ 0.72
CNIH1-205ENST00000556113 PIAS4Q8N2W9 510 aaPredicted RBP19.5■□□□□ 0.71
CNIH1-205ENST00000556113 MSH5O43196 834 aa19.39■□□□□ 0.69
CNIH1-205ENST00000556113 SCAF1Q9H7N4 1312 aaKnown RBP18.24■□□□□ 0.51
CNIH1-205ENST00000556113 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
CNIH1-205ENST00000556113 POTEDQ86YR6 584 aa17.93■□□□□ 0.46
CNIH1-205ENST00000556113 DMRT2Q9Y5R5 561 aa17.82■□□□□ 0.44
CNIH1-205ENST00000556113 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
CNIH1-205ENST00000556113 CNKSR2Q8WXI2 1034 aa17.65■□□□□ 0.42
CNIH1-205ENST00000556113 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
CNIH1-205ENST00000556113 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
CNIH1-205ENST00000556113 HOXD11P31277 338 aaPredicted RBP17.35■□□□□ 0.37
CNIH1-205ENST00000556113 KCNA4P22459 653 aa17.2■□□□□ 0.34
CNIH1-205ENST00000556113 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
CNIH1-205ENST00000556113 DCAF8L1A6NGE4 600 aa16.97■□□□□ 0.31
CNIH1-205ENST00000556113 DNAJC5BQ9UF47 199 aa16.96■□□□□ 0.31
CNIH1-205ENST00000556113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.24
CNIH1-205ENST00000556113 NISCHQ9Y2I1 1504 aa16.5■□□□□ 0.23
CNIH1-205ENST00000556113 RNF39Q9H2S5 420 aa16.49■□□□□ 0.23
CNIH1-205ENST00000556113 SLC4A1APQ9BWU0 796 aaKnown RBP16.43■□□□□ 0.22
CNIH1-205ENST00000556113 C1QBPQ07021 282 aaKnown RBP16.37■□□□□ 0.21
CNIH1-205ENST00000556113 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
CNIH1-205ENST00000556113 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
CNIH1-205ENST00000556113 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
CNIH1-205ENST00000556113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
CNIH1-205ENST00000556113 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
CNIH1-205ENST00000556113 APLP2Q06481 763 aa16.07■□□□□ 0.16
CNIH1-205ENST00000556113 FOXD4L1Q9NU39 408 aa16.05■□□□□ 0.16
CNIH1-205ENST00000556113 MYCNP04198 464 aaPredicted RBP16■□□□□ 0.15
CNIH1-205ENST00000556113 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
CNIH1-205ENST00000556113 ZBTB22O15209 634 aa15.76■□□□□ 0.11
CNIH1-205ENST00000556113 CAPN15O75808 1086 aa15.76■□□□□ 0.11
CNIH1-205ENST00000556113 ZNF219Q9P2Y4 722 aaPredicted RBP15.76■□□□□ 0.11
CNIH1-205ENST00000556113 SPINK5Q9NQ38 1064 aaPredicted RBP15.7■□□□□ 0.1
CNIH1-205ENST00000556113 ATXN8OSP0DMR3 200 aa15.64■□□□□ 0.09
CNIH1-205ENST00000556113 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
CNIH1-205ENST00000556113 DSG3P32926 999 aa15.56■□□□□ 0.08
CNIH1-205ENST00000556113 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
CNIH1-205ENST00000556113 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
CNIH1-205ENST00000556113 ATF5Q9Y2D1 282 aaPredicted RBP15.35■□□□□ 0.05
CNIH1-205ENST00000556113 ABCB7O75027 752 aa15.33■□□□□ 0.04
CNIH1-205ENST00000556113 POLA2Q14181 598 aa15.29■□□□□ 0.04
CNIH1-205ENST00000556113 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
CNIH1-205ENST00000556113 RBM42Q9BTD8 480 aaKnown RBP15.02■□□□□ -0
CNIH1-205ENST00000556113 FBLN2P98095 1184 aa15□□□□□ -0.01
CNIH1-205ENST00000556113 CCDC180Q9P1Z9 1646 aa14.77□□□□□ -0.05
CNIH1-205ENST00000556113 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
CNIH1-205ENST00000556113 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
CNIH1-205ENST00000556113 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
CNIH1-205ENST00000556113 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
CNIH1-205ENST00000556113 MKRN4PQ13434 485 aaPredicted RBP14.72□□□□□ -0.05
CNIH1-205ENST00000556113 AKT1S1Q96B36 256 aa14.7□□□□□ -0.06
CNIH1-205ENST00000556113 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
CNIH1-205ENST00000556113 SSUH2Q9Y2M2 353 aa14.53□□□□□ -0.08
CNIH1-205ENST00000556113 REM2Q8IYK8 340 aaPredicted RBP14.47□□□□□ -0.09
CNIH1-205ENST00000556113 SPDYE4A6NLX3 237 aa14.38□□□□□ -0.11
CNIH1-205ENST00000556113 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
CNIH1-205ENST00000556113 SPDYE1Q8NFV5 336 aaPredicted RBP14.36□□□□□ -0.11
CNIH1-205ENST00000556113 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
CNIH1-205ENST00000556113 PITPNM1O00562 1244 aa14.27□□□□□ -0.13
CNIH1-205ENST00000556113 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.13
CNIH1-205ENST00000556113 POTEHQ6S545 545 aa14.19□□□□□ -0.14
CNIH1-205ENST00000556113 CLEC11AQ9Y240 323 aa14.17□□□□□ -0.14
CNIH1-205ENST00000556113 PROM2Q8N271 834 aa14.14□□□□□ -0.15
CNIH1-205ENST00000556113 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.15
CNIH1-205ENST00000556113 ABCC9O60706 1549 aa14.1□□□□□ -0.15
CNIH1-205ENST00000556113 PRR29P0C7W0 189 aa14.08□□□□□ -0.16
CNIH1-205ENST00000556113 FKBP8Q14318 412 aa14.08□□□□□ -0.16
CNIH1-205ENST00000556113 PIP4P2Q8N4L2 257 aa14.06□□□□□ -0.16
CNIH1-205ENST00000556113 PRKAR2AP13861 404 aaKnown RBP13.93□□□□□ -0.18
CNIH1-205ENST00000556113 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
CNIH1-205ENST00000556113 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
CNIH1-205ENST00000556113 MYO15BQ96JP2 1530 aa13.8□□□□□ -0.2
CNIH1-205ENST00000556113 ZCCHC6Q5VYS8 1495 aaKnown RBP13.8□□□□□ -0.2
CNIH1-205ENST00000556113 NACADO15069 1562 aa13.78□□□□□ -0.2
CNIH1-205ENST00000556113 DCAF1Q9Y4B6 1507 aa13.76□□□□□ -0.21
CNIH1-205ENST00000556113 CHADLQ6NUI6 762 aa13.76□□□□□ -0.21
CNIH1-205ENST00000556113 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
CNIH1-205ENST00000556113 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
CNIH1-205ENST00000556113 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
CNIH1-205ENST00000556113 HAX1O00165 279 aa13.71□□□□□ -0.21
CNIH1-205ENST00000556113 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.21
CNIH1-205ENST00000556113 ZBTB47Q9UFB7 747 aaPredicted RBP13.69□□□□□ -0.22
CNIH1-205ENST00000556113 MIER1Q8N108 512 aa13.66□□□□□ -0.22
CNIH1-205ENST00000556113 C19orf67A6NJJ6 358 aa13.64□□□□□ -0.23
CNIH1-205ENST00000556113 PLCD3Q8N3E9 789 aa13.64□□□□□ -0.23
CNIH1-205ENST00000556113 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
CNIH1-205ENST00000556113 PAK3O75914 559 aaPredicted RBP13.56□□□□□ -0.24
CNIH1-205ENST00000556113 CLCN6P51797 869 aa13.55□□□□□ -0.24
CNIH1-205ENST00000556113 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
CNIH1-205ENST00000556113 CD44P16070 742 aaKnown RBP13.54□□□□□ -0.24
CNIH1-205ENST00000556113 VASPP50552 380 aaPredicted RBP13.54□□□□□ -0.24
CNIH1-205ENST00000556113 UNC13AQ9UPW8 1703 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms