RNA–Protein interactions for RNA: ENST00000527178.1

NDUFS3-205, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 269 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-205ENST00000527178 NISCHQ9Y2I1 1504 aa16.17■□□□□ 0.18
NDUFS3-205ENST00000527178 CCDC180Q9P1Z9 1646 aa13.8□□□□□ -0.2
NDUFS3-205ENST00000527178 ZCCHC6Q5VYS8 1495 aaKnown RBP13.72□□□□□ -0.21
NDUFS3-205ENST00000527178 DCAF1Q9Y4B6 1507 aa13.6□□□□□ -0.23
NDUFS3-205ENST00000527178 HRCP23327 699 aa13.43□□□□□ -0.26
NDUFS3-205ENST00000527178 SUPT5HO00267 1087 aaKnown RBP13.39□□□□□ -0.27
NDUFS3-205ENST00000527178 CHIC1Q5VXU3 224 aa13.37□□□□□ -0.27
NDUFS3-205ENST00000527178 SHROOM4Q9ULL8 1493 aa13.35□□□□□ -0.27
NDUFS3-205ENST00000527178 ZEB1P37275 1124 aaPredicted RBP13.23□□□□□ -0.29
NDUFS3-205ENST00000527178 MYO15BQ96JP2 1530 aa13.23□□□□□ -0.29
NDUFS3-205ENST00000527178 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
NDUFS3-205ENST00000527178 TRIM26Q12899 539 aaPredicted RBP13.1□□□□□ -0.31
NDUFS3-205ENST00000527178 PCGF6Q9BYE7 350 aa13.02□□□□□ -0.33
NDUFS3-205ENST00000527178 ABCC9O60706 1549 aa12.92□□□□□ -0.34
NDUFS3-205ENST00000527178 DCAF8L2P0C7V8 631 aa12.9□□□□□ -0.34
NDUFS3-205ENST00000527178 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
NDUFS3-205ENST00000527178 RSF1Q96T23 1441 aaPredicted RBP12.8□□□□□ -0.36
NDUFS3-205ENST00000527178 MYT1Q01538 1121 aa12.76□□□□□ -0.37
NDUFS3-205ENST00000527178 NACADO15069 1562 aa12.75□□□□□ -0.37
NDUFS3-205ENST00000527178 TRIM41Q8WV44 630 aa12.75□□□□□ -0.37
NDUFS3-205ENST00000527178 LOC105371045A0A1W2PR82 267 aa12.7□□□□□ -0.38
NDUFS3-205ENST00000527178 EEA1Q15075 1411 aa12.56□□□□□ -0.4
NDUFS3-205ENST00000527178 PPARGC1BQ86YN6 1023 aaKnown RBP12.56□□□□□ -0.4
NDUFS3-205ENST00000527178 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
NDUFS3-205ENST00000527178 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
NDUFS3-205ENST00000527178 BAZ1AQ9NRL2 1556 aaPredicted RBP12.48□□□□□ -0.41
NDUFS3-205ENST00000527178 CENPBP07199 599 aaPredicted RBP12.48□□□□□ -0.41
NDUFS3-205ENST00000527178 TNIKQ9UKE5 1360 aa12.39□□□□□ -0.43
NDUFS3-205ENST00000527178 MROH2BQ7Z745 1585 aa12.37□□□□□ -0.43
NDUFS3-205ENST00000527178 CLSPNQ9HAW4 1339 aa12.36□□□□□ -0.43
NDUFS3-205ENST00000527178 ACIN1Q9UKV3 1341 aaKnown RBP12.35□□□□□ -0.43
NDUFS3-205ENST00000527178 TOP2AP11388 1531 aaKnown RBP12.34□□□□□ -0.43
NDUFS3-205ENST00000527178 CCER1Q8TC90 406 aaPredicted RBP12.33□□□□□ -0.44
NDUFS3-205ENST00000527178 CECR2Q9BXF3 1484 aa12.3□□□□□ -0.44
NDUFS3-205ENST00000527178 EIF4G1Q04637 1599 aaKnown RBP12.3□□□□□ -0.44
NDUFS3-205ENST00000527178 DIEXFQ68CQ4 756 aaKnown RBP12.27□□□□□ -0.45
NDUFS3-205ENST00000527178 SCAF1Q9H7N4 1312 aaKnown RBP12.27□□□□□ -0.45
NDUFS3-205ENST00000527178 CSRNP3Q8WYN3 585 aa12.24□□□□□ -0.45
NDUFS3-205ENST00000527178 WIZO95785 1651 aa12.23□□□□□ -0.45
NDUFS3-205ENST00000527178 FAM9AQ8IZU1 332 aaPredicted RBP12.23□□□□□ -0.45
NDUFS3-205ENST00000527178 ZNF316A6NFI3 1004 aaPredicted RBP12.21□□□□□ -0.45
NDUFS3-205ENST00000527178 GOLGA3Q08378 1498 aa12.21□□□□□ -0.46
NDUFS3-205ENST00000527178 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
NDUFS3-205ENST00000527178 SMARCA4P51532 1647 aa12.19□□□□□ -0.46
NDUFS3-205ENST00000527178 PEG3Q9GZU2 1588 aa12.18□□□□□ -0.46
NDUFS3-205ENST00000527178 BAZ1BQ9UIG0 1483 aaKnown RBP12.18□□□□□ -0.46
NDUFS3-205ENST00000527178 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
NDUFS3-205ENST00000527178 CEP164Q9UPV0 1460 aa12.16□□□□□ -0.46
NDUFS3-205ENST00000527178 SMARCA2P51531 1590 aa12.15□□□□□ -0.46
NDUFS3-205ENST00000527178 KIF21BO75037 1637 aa12.11□□□□□ -0.47
NDUFS3-205ENST00000527178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.1□□□□□ -0.47
NDUFS3-205ENST00000527178 APLP2Q06481 763 aa12.09□□□□□ -0.47
NDUFS3-205ENST00000527178 NEUROD1Q13562 356 aa12.07□□□□□ -0.48
NDUFS3-205ENST00000527178 UBTFP17480 764 aaKnown RBP12.05□□□□□ -0.48
NDUFS3-205ENST00000527178 VPS8Q8N3P4 1428 aa12.04□□□□□ -0.48
NDUFS3-205ENST00000527178 GTF3C3Q9Y5Q9 886 aa12.04□□□□□ -0.48
NDUFS3-205ENST00000527178 SOGA1O94964 1423 aa11.99□□□□□ -0.49
NDUFS3-205ENST00000527178 CLIP1P30622 1438 aa11.99□□□□□ -0.49
NDUFS3-205ENST00000527178 ERICH3Q5RHP9 1530 aa11.97□□□□□ -0.49
NDUFS3-205ENST00000527178 TTBK1Q5TCY1 1321 aaPredicted RBP11.96□□□□□ -0.49
NDUFS3-205ENST00000527178 TIMELESSQ9UNS1 1208 aa11.96□□□□□ -0.49
NDUFS3-205ENST00000527178 ABCC8Q09428 1581 aa11.95□□□□□ -0.5
NDUFS3-205ENST00000527178 PABPN1Q86U42 306 aaKnown RBP eCLIP11.91□□□□□ -0.5
NDUFS3-205ENST00000527178 CUX2O14529 1486 aa11.89□□□□□ -0.51
NDUFS3-205ENST00000527178 MAP3K1Q13233 1512 aa11.88□□□□□ -0.51
NDUFS3-205ENST00000527178 ATAD2BQ9ULI0 1458 aa11.86□□□□□ -0.51
NDUFS3-205ENST00000527178 TOP2BQ02880 1626 aa11.86□□□□□ -0.51
NDUFS3-205ENST00000527178 RRBP1Q9P2E9 1410 aaKnown RBP11.85□□□□□ -0.51
NDUFS3-205ENST00000527178 PRXQ9BXM0 1461 aa11.84□□□□□ -0.51
NDUFS3-205ENST00000527178 UNC13AQ9UPW8 1703 aa11.83□□□□□ -0.52
NDUFS3-205ENST00000527178 DNAJC5BQ9UF47 199 aa11.82□□□□□ -0.52
NDUFS3-205ENST00000527178 BIVM-ERCC5R4GMW8 1640 aa11.81□□□□□ -0.52
NDUFS3-205ENST00000527178 MIER1Q8N108 512 aa11.8□□□□□ -0.52
NDUFS3-205ENST00000527178 RUSC2Q8N2Y8 1516 aa11.8□□□□□ -0.52
NDUFS3-205ENST00000527178 BICRAQ9NZM4 1560 aa11.79□□□□□ -0.52
NDUFS3-205ENST00000527178 KIF27Q86VH2 1401 aa11.79□□□□□ -0.52
NDUFS3-205ENST00000527178 EHMT2Q96KQ7 1210 aa11.79□□□□□ -0.52
NDUFS3-205ENST00000527178 SYNJ1O43426 1573 aa11.78□□□□□ -0.52
NDUFS3-205ENST00000527178 DHX57Q6P158 1386 aaKnown RBP11.77□□□□□ -0.53
NDUFS3-205ENST00000527178 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.77□□□□□ -0.53
NDUFS3-205ENST00000527178 HMGXB3Q12766 1538 aa11.76□□□□□ -0.53
NDUFS3-205ENST00000527178 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
NDUFS3-205ENST00000527178 RAPGEF2Q9Y4G8 1499 aa11.75□□□□□ -0.53
NDUFS3-205ENST00000527178 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
NDUFS3-205ENST00000527178 CCNB3Q8WWL7 1395 aa11.72□□□□□ -0.53
NDUFS3-205ENST00000527178 FHAD1B1AJZ9 1412 aa11.69□□□□□ -0.54
NDUFS3-205ENST00000527178 CCER2I3L3R5 266 aa11.68□□□□□ -0.54
NDUFS3-205ENST00000527178 ERICH6BQ5W0A0 696 aa11.66□□□□□ -0.54
NDUFS3-205ENST00000527178 CFTRP13569 1480 aa11.65□□□□□ -0.54
NDUFS3-205ENST00000527178 ARAP1Q96P48 1450 aa11.64□□□□□ -0.55
NDUFS3-205ENST00000527178 SUPT16HQ9Y5B9 1047 aaKnown RBP11.62□□□□□ -0.55
NDUFS3-205ENST00000527178 SETD5Q9C0A6 1442 aa11.61□□□□□ -0.55
NDUFS3-205ENST00000527178 YTHDC1Q96MU7 727 aaKnown RBP11.6□□□□□ -0.55
NDUFS3-205ENST00000527178 MYT1LQ9UL68 1186 aa11.6□□□□□ -0.55
NDUFS3-205ENST00000527178 AQRO60306 1485 aaKnown RBP eCLIP11.59□□□□□ -0.55
NDUFS3-205ENST00000527178 NEFLP07196 543 aa11.57□□□□□ -0.56
NDUFS3-205ENST00000527178 ARHGAP35Q9NRY4 1499 aa11.56□□□□□ -0.56
NDUFS3-205ENST00000527178 EFCAB5A4FU69 1503 aa11.54□□□□□ -0.56
NDUFS3-205ENST00000527178 TIAM1Q13009 1591 aa11.54□□□□□ -0.56
NDUFS3-205ENST00000527178 IGF1RP08069 1367 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms