RNA–Protein interactions for RNA: ENST00000216416.8

CNIH1-201, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNIH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-201ENST00000216416 NISCHQ9Y2I1 1504 aa14.41□□□□□ -0.1
CNIH1-201ENST00000216416 DCAF8L2P0C7V8 631 aa12.65□□□□□ -0.38
CNIH1-201ENST00000216416 SHROOM4Q9ULL8 1493 aa12.45□□□□□ -0.42
CNIH1-201ENST00000216416 CCDC180Q9P1Z9 1646 aa12.22□□□□□ -0.45
CNIH1-201ENST00000216416 ABCC9O60706 1549 aa12.19□□□□□ -0.46
CNIH1-201ENST00000216416 ZCCHC6Q5VYS8 1495 aaKnown RBP12.05□□□□□ -0.48
CNIH1-201ENST00000216416 SUPT5HO00267 1087 aaKnown RBP12□□□□□ -0.49
CNIH1-201ENST00000216416 SCRIBQ14160 1630 aa11.74□□□□□ -0.53
CNIH1-201ENST00000216416 PABPN1Q86U42 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
CNIH1-201ENST00000216416 DCAF1Q9Y4B6 1507 aa11.6□□□□□ -0.55
CNIH1-201ENST00000216416 NACADO15069 1562 aa11.5□□□□□ -0.57
CNIH1-201ENST00000216416 CECR2Q9BXF3 1484 aa11.47□□□□□ -0.57
CNIH1-201ENST00000216416 RB1CC1Q8TDY2 1594 aa11.46□□□□□ -0.57
CNIH1-201ENST00000216416 MYO15BQ96JP2 1530 aa11.37□□□□□ -0.59
CNIH1-201ENST00000216416 RSF1Q96T23 1441 aaPredicted RBP11.33□□□□□ -0.6
CNIH1-201ENST00000216416 UNC13AQ9UPW8 1703 aa11.3□□□□□ -0.6
CNIH1-201ENST00000216416 MROH2BQ7Z745 1585 aa11.3□□□□□ -0.6
CNIH1-201ENST00000216416 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
CNIH1-201ENST00000216416 CHIC1Q5VXU3 224 aa11.25□□□□□ -0.61
CNIH1-201ENST00000216416 BICRAQ9NZM4 1560 aa11.23□□□□□ -0.61
CNIH1-201ENST00000216416 WIZO95785 1651 aa11.21□□□□□ -0.62
CNIH1-201ENST00000216416 FAM9AQ8IZU1 332 aaPredicted RBP11.19□□□□□ -0.62
CNIH1-201ENST00000216416 LOC105371045A0A1W2PR82 267 aa11.1□□□□□ -0.63
CNIH1-201ENST00000216416 DNAJC5BQ9UF47 199 aa11.07□□□□□ -0.64
CNIH1-201ENST00000216416 BAZ1AQ9NRL2 1556 aaPredicted RBP11.06□□□□□ -0.64
CNIH1-201ENST00000216416 TRIM41Q8WV44 630 aa11.05□□□□□ -0.64
CNIH1-201ENST00000216416 SMARCA4P51532 1647 aa11.04□□□□□ -0.64
CNIH1-201ENST00000216416 CCDC88BA6NC98 1476 aa10.96□□□□□ -0.65
CNIH1-201ENST00000216416 ATAD2BQ9ULI0 1458 aa10.94□□□□□ -0.66
CNIH1-201ENST00000216416 EIF4G1Q04637 1599 aaKnown RBP10.92□□□□□ -0.66
CNIH1-201ENST00000216416 BAZ1BQ9UIG0 1483 aaKnown RBP10.9□□□□□ -0.66
CNIH1-201ENST00000216416 ABCC8Q09428 1581 aa10.89□□□□□ -0.67
CNIH1-201ENST00000216416 TOP2AP11388 1531 aaKnown RBP10.86□□□□□ -0.67
CNIH1-201ENST00000216416 SMARCA2P51531 1590 aa10.86□□□□□ -0.67
CNIH1-201ENST00000216416 RANGAP1P46060 587 aaPredicted RBP10.83□□□□□ -0.68
CNIH1-201ENST00000216416 PPARGC1BQ86YN6 1023 aaKnown RBP10.8□□□□□ -0.68
CNIH1-201ENST00000216416 CC2D2AQ9P2K1 1620 aa10.79□□□□□ -0.68
CNIH1-201ENST00000216416 TTBK1Q5TCY1 1321 aaPredicted RBP10.75□□□□□ -0.69
CNIH1-201ENST00000216416 RUSC2Q8N2Y8 1516 aa10.73□□□□□ -0.69
CNIH1-201ENST00000216416 NCAPD3P42695 1498 aa10.73□□□□□ -0.69
CNIH1-201ENST00000216416 SOGA1O94964 1423 aa10.72□□□□□ -0.69
CNIH1-201ENST00000216416 NESP48681 1621 aa10.71□□□□□ -0.69
CNIH1-201ENST00000216416 PEG3Q9GZU2 1588 aa10.71□□□□□ -0.7
CNIH1-201ENST00000216416 WRNQ14191 1432 aaPredicted RBP eCLIP10.66□□□□□ -0.7
CNIH1-201ENST00000216416 UBTFP17480 764 aaKnown RBP10.66□□□□□ -0.7
CNIH1-201ENST00000216416 PCGF6Q9BYE7 350 aa10.61□□□□□ -0.71
CNIH1-201ENST00000216416 SYNJ1O43426 1573 aa10.61□□□□□ -0.71
CNIH1-201ENST00000216416 HMGXB3Q12766 1538 aa10.59□□□□□ -0.71
CNIH1-201ENST00000216416 CSRNP3Q8WYN3 585 aa10.59□□□□□ -0.71
CNIH1-201ENST00000216416 CADPSQ9ULU8 1353 aa10.59□□□□□ -0.71
CNIH1-201ENST00000216416 CFTRP13569 1480 aa10.55□□□□□ -0.72
CNIH1-201ENST00000216416 CUX1P39880 1505 aa10.5□□□□□ -0.73
CNIH1-201ENST00000216416 FANCD2Q9BXW9 1451 aa10.49□□□□□ -0.73
CNIH1-201ENST00000216416 RAD54L2Q9Y4B4 1467 aa10.48□□□□□ -0.73
CNIH1-201ENST00000216416 P3H3Q8IVL6 736 aa10.46□□□□□ -0.74
CNIH1-201ENST00000216416 TDRD9Q8NDG6 1382 aaKnown RBP10.45□□□□□ -0.74
CNIH1-201ENST00000216416 RAPGEF2Q9Y4G8 1499 aa10.43□□□□□ -0.74
CNIH1-201ENST00000216416 CUX2O14529 1486 aa10.42□□□□□ -0.74
CNIH1-201ENST00000216416 FGD5Q6ZNL6 1462 aa10.42□□□□□ -0.74
CNIH1-201ENST00000216416 TOP2BQ02880 1626 aa10.39□□□□□ -0.75
CNIH1-201ENST00000216416 ATP1B4Q9UN42 357 aaPredicted RBP10.39□□□□□ -0.75
CNIH1-201ENST00000216416 CEP164Q9UPV0 1460 aa10.37□□□□□ -0.75
CNIH1-201ENST00000216416 CEP162Q5TB80 1403 aa10.37□□□□□ -0.75
CNIH1-201ENST00000216416 FBLN2P98095 1184 aa10.37□□□□□ -0.75
CNIH1-201ENST00000216416 URB2Q14146 1524 aaKnown RBP10.37□□□□□ -0.75
CNIH1-201ENST00000216416 TOPBP1Q92547 1522 aa10.35□□□□□ -0.75
CNIH1-201ENST00000216416 POLA1P09884 1462 aaPredicted RBP10.35□□□□□ -0.75
CNIH1-201ENST00000216416 PDS5BQ9NTI5 1447 aa10.35□□□□□ -0.75
CNIH1-201ENST00000216416 ERCC6Q03468 1493 aa10.34□□□□□ -0.75
CNIH1-201ENST00000216416 KIF27Q86VH2 1401 aa10.34□□□□□ -0.75
CNIH1-201ENST00000216416 ARID3CA6NKF2 412 aa10.34□□□□□ -0.75
CNIH1-201ENST00000216416 IGF1RP08069 1367 aa10.33□□□□□ -0.76
CNIH1-201ENST00000216416 KIF21AQ7Z4S6 1674 aa10.33□□□□□ -0.76
CNIH1-201ENST00000216416 AQRO60306 1485 aaKnown RBP eCLIP10.32□□□□□ -0.76
CNIH1-201ENST00000216416 GOLGA3Q08378 1498 aa10.31□□□□□ -0.76
CNIH1-201ENST00000216416 TNIKQ9UKE5 1360 aa10.3□□□□□ -0.76
CNIH1-201ENST00000216416 BIVM-ERCC5R4GMW8 1640 aa10.3□□□□□ -0.76
CNIH1-201ENST00000216416 CARMIL1Q5VZK9 1371 aa10.29□□□□□ -0.76
CNIH1-201ENST00000216416 LAMC3Q9Y6N6 1575 aa10.28□□□□□ -0.76
CNIH1-201ENST00000216416 CLIP1P30622 1438 aa10.28□□□□□ -0.76
CNIH1-201ENST00000216416 TRIM26Q12899 539 aaPredicted RBP10.27□□□□□ -0.76
CNIH1-201ENST00000216416 EEA1Q15075 1411 aa10.27□□□□□ -0.76
CNIH1-201ENST00000216416 ZNF608Q9ULD9 1512 aaPredicted RBP10.27□□□□□ -0.77
CNIH1-201ENST00000216416 DNMBPQ6XZF7 1577 aa10.24□□□□□ -0.77
CNIH1-201ENST00000216416 PRXQ9BXM0 1461 aa10.23□□□□□ -0.77
CNIH1-201ENST00000216416 HNRNPUL2Q1KMD3 747 aaKnown RBP10.23□□□□□ -0.77
CNIH1-201ENST00000216416 KANK4Q5T7N3 995 aaPredicted RBP10.22□□□□□ -0.77
CNIH1-201ENST00000216416 ITGAEP38570 1179 aa10.22□□□□□ -0.77
CNIH1-201ENST00000216416 APLP2Q06481 763 aa10.22□□□□□ -0.77
CNIH1-201ENST00000216416 PRDM2Q13029 1718 aa10.21□□□□□ -0.78
CNIH1-201ENST00000216416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.21□□□□□ -0.78
CNIH1-201ENST00000216416 GAPVD1Q14C86 1478 aa10.19□□□□□ -0.78
CNIH1-201ENST00000216416 MRC2Q9UBG0 1479 aa10.18□□□□□ -0.78
CNIH1-201ENST00000216416 ARAP1Q96P48 1450 aa10.17□□□□□ -0.78
CNIH1-201ENST00000216416 ABCA10Q8WWZ4 1543 aa10.17□□□□□ -0.78
CNIH1-201ENST00000216416 CHMP7Q8WUX9 453 aaPredicted RBP10.16□□□□□ -0.78
CNIH1-201ENST00000216416 KIF21BO75037 1637 aa10.16□□□□□ -0.78
CNIH1-201ENST00000216416 FHOD3Q2V2M9 1422 aa10.15□□□□□ -0.78
CNIH1-201ENST00000216416 ARHGAP35Q9NRY4 1499 aa10.12□□□□□ -0.79
CNIH1-201ENST00000216416 VPS8Q8N3P4 1428 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms