Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.941e-323■■□□□ 14.2
DKC1O60832 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.851e-323■■□□□ 14.2
DKC1O60832 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.771e-323■■□□□ 14.2
DKC1O60832 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.731e-323■■□□□ 14.2
DKC1O60832 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.731e-323■■□□□ 14.2
DKC1O60832 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.021e-323■■□□□ 14.2
DKC1O60832 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.021e-323■■□□□ 14.2
DKC1O60832 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.281e-12■■□□□ 14.2
DKC1O60832 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.041e-12■■□□□ 14.2
DKC1O60832 SRSF5-215ENST00000556587 1863 ntTSL 1 (best)13.78□□□□□ -0.21e-12■■□□□ 14.2
DKC1O60832 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC13.25□□□□□ -0.291e-12■■□□□ 14.2
DKC1O60832 SRSF5-217ENST00000557154 1500 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.641e-12■■□□□ 14.2
DKC1O60832 SRSF5-202ENST00000553369 613 ntTSL 211.05□□□□□ -0.641e-12■■□□□ 14.2
DKC1O60832 SRSF5-204ENST00000553548 526 ntTSL 4 BASIC11.05□□□□□ -0.641e-12■■□□□ 14.2
DKC1O60832 SRSF5-212ENST00000556184 2443 ntTSL 1 (best)10.88□□□□□ -0.671e-12■■□□□ 14.2
DKC1O60832 SRSF5-211ENST00000555547 2057 ntTSL 59.99□□□□□ -0.811e-12■■□□□ 14.2
DKC1O60832 SRSF5-219ENST00000557460 939 ntTSL 59.77□□□□□ -0.851e-12■■□□□ 14.2
DKC1O60832 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC9.28□□□□□ -0.921e-12■■□□□ 14.2
DKC1O60832 SRSF5-207ENST00000554465 3044 ntTSL 1 (best)9.04□□□□□ -0.961e-12■■□□□ 14.2
DKC1O60832 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.42□□□□□ -1.221e-12■■□□□ 14.2
DKC1O60832 RPL4-204ENST00000563473 475 ntTSL 36.37□□□□□ -1.391e-323■■□□□ 14.2
DKC1O60832 SNORD18C-201ENST00000362704 69 ntBASIC-2.66□□□□□ -2.841e-323■■□□□ 14.2
DKC1O60832 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.913e-85■■□□□ 14.1
DKC1O60832 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.813e-85■■□□□ 14.1
DKC1O60832 TNPO2-204ENST00000585886 2362 ntTSL 1 (best)17.37■□□□□ 0.373e-85■■□□□ 14.1
DKC1O60832 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.143e-85■■□□□ 14.1
DKC1O60832 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.133e-85■■□□□ 14.1
DKC1O60832 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.323e-85■■□□□ 14.1
DKC1O60832 RPL23-205ENST00000470646 333 ntTSL 314.61□□□□□ -0.077e-71■■□□□ 14.1
DKC1O60832 RPL23-202ENST00000378096 392 ntTSL 313.58□□□□□ -0.247e-71■■□□□ 14.1
DKC1O60832 RPL23-203ENST00000394332 625 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.247e-71■■□□□ 14.1
DKC1O60832 RPL23-207ENST00000577407 615 ntTSL 2 BASIC13.58□□□□□ -0.247e-71■■□□□ 14.1
DKC1O60832 RPL23-204ENST00000394333 444 ntTSL 2 BASIC12.93□□□□□ -0.347e-71■■□□□ 14.1
DKC1O60832 RPL23-201ENST00000245857 588 ntTSL 3 BASIC11.55□□□□□ -0.567e-71■■□□□ 14.1
DKC1O60832 RPL23-206ENST00000479035 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.67e-71■■□□□ 14.1
DKC1O60832 RPL23-208ENST00000577760 3081 nt11.23□□□□□ -0.617e-71■■□□□ 14.1
DKC1O60832 RPL23-211ENST00000584912 2779 ntTSL 1 (best)9.57□□□□□ -0.887e-71■■□□□ 14.1
DKC1O60832 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.391e-323■■□□□ 14
DKC1O60832 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.9■□□□□ 0.141e-323■■□□□ 14
DKC1O60832 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.8■□□□□ 0.121e-323■■□□□ 14
DKC1O60832 RPL18A-202ENST00000597648 683 ntTSL 315.55■□□□□ 0.081e-323■■□□□ 14
DKC1O60832 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC15.19■□□□□ 0.021e-323■■□□□ 14
DKC1O60832 RPL18A-206ENST00000600238 954 ntTSL 212.63□□□□□ -0.391e-323■■□□□ 14
DKC1O60832 SNORA68-201ENST00000384437 133 ntBASIC8.31□□□□□ -1.081e-323■■□□□ 14
DKC1O60832 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.42■□□□□ 0.541e-323■■□□□ 14
DKC1O60832 RPL30-211ENST00000521726 1129 ntTSL 317.16■□□□□ 0.341e-323■■□□□ 14
DKC1O60832 RPL30-206ENST00000518850 614 ntTSL 216.15■□□□□ 0.181e-323■■□□□ 14
DKC1O60832 RPL30-201ENST00000287038 543 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.251e-323■■□□□ 14
DKC1O60832 RPL30-205ENST00000518164 1128 ntTSL 1 (best)13.19□□□□□ -0.31e-323■■□□□ 14
DKC1O60832 RPL30-213ENST00000523172 274 ntTSL 5 BASIC13.19□□□□□ -0.31e-323■■□□□ 14
DKC1O60832 RPL30-209ENST00000521291 575 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.591e-323■■□□□ 14
DKC1O60832 RPL30-210ENST00000521534 573 ntTSL 22.77□□□□□ -1.971e-323■■□□□ 14
DKC1O60832 SNORA72-201ENST00000384339 132 ntBASIC1.08□□□□□ -2.241e-323■■□□□ 14
DKC1O60832 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.23■■□□□ 1.791e-323■■□□□ 14
DKC1O60832 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.371e-323■■□□□ 14
DKC1O60832 RFWD2-203ENST00000367667 2034 ntTSL 1 (best)11.94□□□□□ -0.51e-323■■□□□ 14
DKC1O60832 RFWD2-206ENST00000461830 2131 ntTSL 58.13□□□□□ -1.111e-323■■□□□ 14
DKC1O60832 RFWD2-202ENST00000367666 2022 ntTSL 27.14□□□□□ -1.271e-323■■□□□ 14
DKC1O60832 SCARNA3-201ENST00000517097 143 ntBASIC2.89□□□□□ -1.951e-323■■□□□ 14
DKC1O60832 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.89■■□□□ 1.747e-10■■□□□ 13.9
DKC1O60832 CHDH-203ENST00000481668 631 ntTSL 222.32■■□□□ 1.167e-10■■□□□ 13.9
DKC1O60832 CHDH-202ENST00000467802 565 ntTSL 222.05■■□□□ 1.127e-10■■□□□ 13.9
DKC1O60832 ZCCHC2-202ENST00000585873 5652 ntTSL 1 (best)21.79■■□□□ 1.087e-10■■□□□ 13.9
DKC1O60832 ZCCHC2-210ENST00000591632 608 ntTSL 320.87■□□□□ 0.937e-10■■□□□ 13.9
DKC1O60832 ZCCHC2-211ENST00000621048 704 ntTSL 319.33■□□□□ 0.687e-10■■□□□ 13.9
DKC1O60832 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.257e-10■■□□□ 13.9
DKC1O60832 EPS15L1-208ENST00000595845 567 ntTSL 215.53■□□□□ 0.081e-14■■□□□ 13.9
DKC1O60832 EPS15L1-209ENST00000596037 629 ntTSL 313.57□□□□□ -0.241e-14■■□□□ 13.9
DKC1O60832 EPS15L1-205ENST00000593760 583 ntTSL 412.91□□□□□ -0.341e-14■■□□□ 13.9
DKC1O60832 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC10.2□□□□□ -0.781e-14■■□□□ 13.9
DKC1O60832 EPS15L1-211ENST00000597559 743 ntTSL 29.7□□□□□ -0.861e-14■■□□□ 13.9
DKC1O60832 EPS15L1-216ENST00000602151 420 ntTSL 29.52□□□□□ -0.891e-14■■□□□ 13.9
DKC1O60832 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.917e-10■■□□□ 13.9
DKC1O60832 ZFAS1-207ENST00000458653 596 ntTSL 231.77■■■□□ 2.681e-323■■□□□ 13.9
DKC1O60832 ZFAS1-202ENST00000371743 1008 ntTSL 1 (best)28.27■■■□□ 2.121e-323■■□□□ 13.9
DKC1O60832 ZFAS1-203ENST00000417721 860 ntTSL 1 (best)26.97■■□□□ 1.911e-323■■□□□ 13.9
DKC1O60832 ZFAS1-205ENST00000441722 946 ntTSL 1 (best)24.34■■□□□ 1.491e-323■■□□□ 13.9
DKC1O60832 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.34■■□□□ 1.491e-323■■□□□ 13.9
DKC1O60832 ZFAS1-209ENST00000620594 508 ntTSL 38.63□□□□□ -1.031e-323■■□□□ 13.9
DKC1O60832 ZFAS1-201ENST00000326677 504 ntTSL 1 (best)8.04□□□□□ -1.121e-323■■□□□ 13.9
DKC1O60832 ZFAS1-204ENST00000428008 566 ntTSL 28.04□□□□□ -1.121e-323■■□□□ 13.9
DKC1O60832 RBMS1-211ENST00000477486 562 ntTSL 424.7■■□□□ 1.543e-9■■□□□ 13.9
DKC1O60832 RBMS1-214ENST00000491781 1533 ntTSL 1 (best)18.94■□□□□ 0.623e-9■■□□□ 13.9
DKC1O60832 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.133e-9■■□□□ 13.9
DKC1O60832 RBMS1-209ENST00000474820 4016 ntTSL 1 (best)5.28□□□□□ -1.563e-9■■□□□ 13.9
DKC1O60832 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.011e-323■■□□□ 13.8
DKC1O60832 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.918e-28■■□□□ 13.8
DKC1O60832 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.288e-28■■□□□ 13.8
DKC1O60832 DHFR-205ENST00000511032 1474 ntTSL 2 BASIC11.93□□□□□ -0.58e-28■■□□□ 13.8
DKC1O60832 DHFR-206ENST00000513048 994 ntTSL 1 (best)10.39□□□□□ -0.758e-28■■□□□ 13.8
DKC1O60832 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC10.1□□□□□ -0.798e-28■■□□□ 13.8
DKC1O60832 DHFR-204ENST00000508282 545 ntTSL 34.18□□□□□ -1.748e-28■■□□□ 13.8
DKC1O60832 DHFR-207ENST00000513314 582 ntTSL 33.28□□□□□ -1.888e-28■■□□□ 13.8
DKC1O60832 DDX39B-206ENST00000419338 928 ntTSL 515.7■□□□□ 0.15e-19■■□□□ 13.7
DKC1O60832 DDX39B-210ENST00000431908 914 ntTSL 513.35□□□□□ -0.275e-19■■□□□ 13.7
DKC1O60832 DDX39B-208ENST00000428098 817 ntTSL 313.11□□□□□ -0.315e-19■■□□□ 13.7
DKC1O60832 DDX39B-212ENST00000456662 932 ntTSL 513.11□□□□□ -0.315e-19■■□□□ 13.7
DKC1O60832 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.415e-19■■□□□ 13.7
DKC1O60832 DDX39B-219ENST00000481456 5158 ntTSL 212.39□□□□□ -0.435e-19■■□□□ 13.7
DKC1O60832 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC11.93□□□□□ -0.55e-19■■□□□ 13.7
Retrieved 100 of 8,567 protein–RNA pairs in 157.4 ms