RNA–Protein interactions for RNA: ENST00000555547.5

SRSF5-211, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 5

Gene SRSF5, Length 2,057 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-211ENST00000555547 AEBP2Q6ZN18 517 aaPredicted RBP24.45■■□□□ 1.5
SRSF5-211ENST00000555547 CHIC1Q5VXU3 224 aa24.3■■□□□ 1.48
SRSF5-211ENST00000555547 PHF23Q9BUL5 403 aaPredicted RBP21.59■■□□□ 1.05
SRSF5-211ENST00000555547 SENP3Q9H4L4 574 aaPredicted RBP20.42■□□□□ 0.86
SRSF5-211ENST00000555547 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
SRSF5-211ENST00000555547 NISCHQ9Y2I1 1504 aa19.55■□□□□ 0.72
SRSF5-211ENST00000555547 FOXD1Q16676 465 aa19.03■□□□□ 0.64
SRSF5-211ENST00000555547 ADRA2BP18089 450 aa18.94■□□□□ 0.62
SRSF5-211ENST00000555547 PPP6R1Q9UPN7 881 aa18.91■□□□□ 0.62
SRSF5-211ENST00000555547 ABCC9O60706 1549 aa18.74■□□□□ 0.59
SRSF5-211ENST00000555547 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
SRSF5-211ENST00000555547 KCNA4P22459 653 aa18.16■□□□□ 0.5
SRSF5-211ENST00000555547 PIAS4Q8N2W9 510 aaPredicted RBP18.08■□□□□ 0.49
SRSF5-211ENST00000555547 SLC24A1O60721 1099 aa17.92■□□□□ 0.46
SRSF5-211ENST00000555547 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
SRSF5-211ENST00000555547 DNAJC5Q9H3Z4 198 aa17.76■□□□□ 0.43
SRSF5-211ENST00000555547 MYT1Q01538 1121 aa17.75■□□□□ 0.43
SRSF5-211ENST00000555547 PPP4R3CPQ6ZMV5 832 aa17.73■□□□□ 0.43
SRSF5-211ENST00000555547 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
SRSF5-211ENST00000555547 PELP1Q8IZL8 1130 aaKnown RBP17.59■□□□□ 0.41
SRSF5-211ENST00000555547 RB1CC1Q8TDY2 1594 aa17.5■□□□□ 0.39
SRSF5-211ENST00000555547 TTBK1Q5TCY1 1321 aaPredicted RBP17.5■□□□□ 0.39
SRSF5-211ENST00000555547 PABPN1Q86U42 306 aaKnown RBP eCLIP17.34■□□□□ 0.37
SRSF5-211ENST00000555547 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
SRSF5-211ENST00000555547 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
SRSF5-211ENST00000555547 NPM3O75607 178 aaKnown RBP17.25■□□□□ 0.35
SRSF5-211ENST00000555547 NACADO15069 1562 aa17.22■□□□□ 0.35
SRSF5-211ENST00000555547 CSRNP3Q8WYN3 585 aa17.12■□□□□ 0.33
SRSF5-211ENST00000555547 MSH5O43196 834 aa17.11■□□□□ 0.33
SRSF5-211ENST00000555547 CECR2Q9BXF3 1484 aa17.06■□□□□ 0.32
SRSF5-211ENST00000555547 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
SRSF5-211ENST00000555547 MAPK8IP2Q13387 824 aaPredicted RBP17■□□□□ 0.31
SRSF5-211ENST00000555547 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
SRSF5-211ENST00000555547 BICRAQ9NZM4 1560 aa16.99■□□□□ 0.31
SRSF5-211ENST00000555547 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
SRSF5-211ENST00000555547 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
SRSF5-211ENST00000555547 UNC13AQ9UPW8 1703 aa16.85■□□□□ 0.29
SRSF5-211ENST00000555547 DAXXQ9UER7 740 aaPredicted RBP16.83■□□□□ 0.28
SRSF5-211ENST00000555547 DCAF8L2P0C7V8 631 aa16.81■□□□□ 0.28
SRSF5-211ENST00000555547 APLP2Q06481 763 aa16.8■□□□□ 0.28
SRSF5-211ENST00000555547 ZBTB22O15209 634 aa16.79■□□□□ 0.28
SRSF5-211ENST00000555547 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
SRSF5-211ENST00000555547 PRKCSHP14314 528 aaPredicted RBP16.72■□□□□ 0.27
SRSF5-211ENST00000555547 ERICH6Q7L0X2 663 aa16.72■□□□□ 0.27
SRSF5-211ENST00000555547 CUX2O14529 1486 aa16.68■□□□□ 0.26
SRSF5-211ENST00000555547 EIF4G1Q04637 1599 aaKnown RBP16.65■□□□□ 0.26
SRSF5-211ENST00000555547 RNF216Q9NWF9 866 aaPredicted RBP16.54■□□□□ 0.24
SRSF5-211ENST00000555547 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
SRSF5-211ENST00000555547 TRIM41Q8WV44 630 aa16.42■□□□□ 0.22
SRSF5-211ENST00000555547 FOXD4L1Q9NU39 408 aa16.37■□□□□ 0.21
SRSF5-211ENST00000555547 HOXD11P31277 338 aaPredicted RBP16.31■□□□□ 0.2
SRSF5-211ENST00000555547 ERCC6Q03468 1493 aa16.28■□□□□ 0.2
SRSF5-211ENST00000555547 SCRIBQ14160 1630 aa16.2■□□□□ 0.18
SRSF5-211ENST00000555547 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
SRSF5-211ENST00000555547 SLC4A2P04920 1241 aa16.17■□□□□ 0.18
SRSF5-211ENST00000555547 ZCCHC6Q5VYS8 1495 aaKnown RBP15.98■□□□□ 0.15
SRSF5-211ENST00000555547 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
SRSF5-211ENST00000555547 THOC2Q8NI27 1593 aaKnown RBP15.85■□□□□ 0.13
SRSF5-211ENST00000555547 DCAF8L1A6NGE4 600 aa15.82■□□□□ 0.12
SRSF5-211ENST00000555547 NESP48681 1621 aa15.81■□□□□ 0.12
SRSF5-211ENST00000555547 MYCNP04198 464 aaPredicted RBP15.8■□□□□ 0.12
SRSF5-211ENST00000555547 OSCARQ8IYS5 282 aa15.79■□□□□ 0.12
SRSF5-211ENST00000555547 ATAD2BQ9ULI0 1458 aa15.71■□□□□ 0.11
SRSF5-211ENST00000555547 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
SRSF5-211ENST00000555547 PDS5BQ9NTI5 1447 aa15.67■□□□□ 0.1
SRSF5-211ENST00000555547 LAMC3Q9Y6N6 1575 aa15.65■□□□□ 0.1
SRSF5-211ENST00000555547 EIF5BO60841 1220 aaKnown RBP15.65■□□□□ 0.1
SRSF5-211ENST00000555547 ARXQ96QS3 562 aa15.64■□□□□ 0.09
SRSF5-211ENST00000555547 ATXN8OSP0DMR3 200 aa15.61■□□□□ 0.09
SRSF5-211ENST00000555547 SMARCA2P51531 1590 aa15.61■□□□□ 0.09
SRSF5-211ENST00000555547 BAZ1AQ9NRL2 1556 aaPredicted RBP15.6■□□□□ 0.09
SRSF5-211ENST00000555547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.092e-16■■□□□ 13.2
SRSF5-211ENST00000555547 ATF5Q9Y2D1 282 aaPredicted RBP15.57■□□□□ 0.08
SRSF5-211ENST00000555547 BCL11AQ9H165 835 aa15.56■□□□□ 0.08
SRSF5-211ENST00000555547 MRC2Q9UBG0 1479 aa15.53■□□□□ 0.08
SRSF5-211ENST00000555547 WDR62O43379 1518 aa15.5■□□□□ 0.07
SRSF5-211ENST00000555547 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
SRSF5-211ENST00000555547 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
SRSF5-211ENST00000555547 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
SRSF5-211ENST00000555547 TRHP20396 242 aaPredicted RBP15.49■□□□□ 0.07
SRSF5-211ENST00000555547 RTN4Q9NQC3 1192 aaKnown RBP15.49■□□□□ 0.07
SRSF5-211ENST00000555547 U3KPZ7 1027 aaPredicted RBP15.48■□□□□ 0.07
SRSF5-211ENST00000555547 KIF21AQ7Z4S6 1674 aa15.47■□□□□ 0.07
SRSF5-211ENST00000555547 BAZ1BQ9UIG0 1483 aaKnown RBP15.46■□□□□ 0.06
SRSF5-211ENST00000555547 CADPSQ9ULU8 1353 aa15.42■□□□□ 0.06
SRSF5-211ENST00000555547 FKBP8Q14318 412 aa15.42■□□□□ 0.06
SRSF5-211ENST00000555547 ARHGEF11O15085 1522 aa15.41■□□□□ 0.06
SRSF5-211ENST00000555547 CYB5RLQ6IPT4 315 aa15.39■□□□□ 0.05
SRSF5-211ENST00000555547 SMARCA4P51532 1647 aa15.36■□□□□ 0.05
SRSF5-211ENST00000555547 RANGAP1P46060 587 aaPredicted RBP15.36■□□□□ 0.05
SRSF5-211ENST00000555547 PEG3Q9GZU2 1588 aa15.33■□□□□ 0.04
SRSF5-211ENST00000555547 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
SRSF5-211ENST00000555547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
SRSF5-211ENST00000555547 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
SRSF5-211ENST00000555547 ILDR1Q86SU0 546 aaPredicted RBP15.25■□□□□ 0.03
SRSF5-211ENST00000555547 CEP164Q9UPV0 1460 aa15.25■□□□□ 0.03
SRSF5-211ENST00000555547 FAM9AQ8IZU1 332 aaPredicted RBP15.22■□□□□ 0.03
SRSF5-211ENST00000555547 AMER1Q5JTC6 1135 aaPredicted RBP15.21■□□□□ 0.03
SRSF5-211ENST00000555547 ARAP1Q96P48 1450 aa15.2■□□□□ 0.02
SRSF5-211ENST00000555547 FANCD2Q9BXW9 1451 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms