RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 NISCHQ9Y2I1 1504 aa30.56■■■□□ 2.48
SRSF5-201ENST00000394366 CCDC180Q9P1Z9 1646 aa27.14■■□□□ 1.93
SRSF5-201ENST00000394366 ABCC9O60706 1549 aa26.69■■□□□ 1.86
SRSF5-201ENST00000394366 DCAF8L2P0C7V8 631 aa25.66■■□□□ 1.7
SRSF5-201ENST00000394366 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
SRSF5-201ENST00000394366 NACADO15069 1562 aa25.58■■□□□ 1.69
SRSF5-201ENST00000394366 ZCCHC6Q5VYS8 1495 aaKnown RBP25.43■■□□□ 1.66
SRSF5-201ENST00000394366 MYO15BQ96JP2 1530 aa25.4■■□□□ 1.66
SRSF5-201ENST00000394366 DCAF1Q9Y4B6 1507 aa25.27■■□□□ 1.64
SRSF5-201ENST00000394366 PABPN1Q86U42 306 aaKnown RBP eCLIP24.97■■□□□ 1.595e-9■■■■□ 23.4
SRSF5-201ENST00000394366 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.58
SRSF5-201ENST00000394366 BICRAQ9NZM4 1560 aa24.82■■□□□ 1.56
SRSF5-201ENST00000394366 SCRIBQ14160 1630 aa24.8■■□□□ 1.56
SRSF5-201ENST00000394366 SHROOM4Q9ULL8 1493 aa24.57■■□□□ 1.52
SRSF5-201ENST00000394366 DNAJC5BQ9UF47 199 aa24.56■■□□□ 1.52
SRSF5-201ENST00000394366 EIF4G1Q04637 1599 aaKnown RBP24.19■■□□□ 1.46
SRSF5-201ENST00000394366 CC2D2AQ9P2K1 1620 aa24.1■■□□□ 1.45
SRSF5-201ENST00000394366 CECR2Q9BXF3 1484 aa23.98■■□□□ 1.43
SRSF5-201ENST00000394366 SMARCA4P51532 1647 aa23.7■■□□□ 1.38
SRSF5-201ENST00000394366 BAZ1AQ9NRL2 1556 aaPredicted RBP23.69■■□□□ 1.38
SRSF5-201ENST00000394366 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
SRSF5-201ENST00000394366 NCAPD3P42695 1498 aa23.62■■□□□ 1.37
SRSF5-201ENST00000394366 SMARCA2P51531 1590 aa23.58■■□□□ 1.36
SRSF5-201ENST00000394366 MROH2BQ7Z745 1585 aa23.55■■□□□ 1.36
SRSF5-201ENST00000394366 SUPT5HO00267 1087 aaKnown RBP23.48■■□□□ 1.35
SRSF5-201ENST00000394366 HMGXB3Q12766 1538 aa23.46■■□□□ 1.35
SRSF5-201ENST00000394366 PEG3Q9GZU2 1588 aa23.46■■□□□ 1.35
SRSF5-201ENST00000394366 BAZ1BQ9UIG0 1483 aaKnown RBP23.43■■□□□ 1.34
SRSF5-201ENST00000394366 RSF1Q96T23 1441 aaPredicted RBP23.29■■□□□ 1.32
SRSF5-201ENST00000394366 WIZO95785 1651 aa23.27■■□□□ 1.32
SRSF5-201ENST00000394366 NESP48681 1621 aa23.06■■□□□ 1.28
SRSF5-201ENST00000394366 TOP2AP11388 1531 aaKnown RBP23.04■■□□□ 1.28
SRSF5-201ENST00000394366 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
SRSF5-201ENST00000394366 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
SRSF5-201ENST00000394366 CADPSQ9ULU8 1353 aa22.95■■□□□ 1.26
SRSF5-201ENST00000394366 PDS5BQ9NTI5 1447 aa22.87■■□□□ 1.25
SRSF5-201ENST00000394366 CCDC88BA6NC98 1476 aa22.8■■□□□ 1.24
SRSF5-201ENST00000394366 CFTRP13569 1480 aa22.78■■□□□ 1.24
SRSF5-201ENST00000394366 CUX2O14529 1486 aa22.77■■□□□ 1.24
SRSF5-201ENST00000394366 KIF21AQ7Z4S6 1674 aa22.73■■□□□ 1.23
SRSF5-201ENST00000394366 THOC2Q8NI27 1593 aaKnown RBP22.68■■□□□ 1.22
SRSF5-201ENST00000394366 FANCD2Q9BXW9 1451 aa22.67■■□□□ 1.22
SRSF5-201ENST00000394366 CEP164Q9UPV0 1460 aa22.65■■□□□ 1.22
SRSF5-201ENST00000394366 MRC2Q9UBG0 1479 aa22.62■■□□□ 1.21
SRSF5-201ENST00000394366 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
SRSF5-201ENST00000394366 WDR62O43379 1518 aa22.52■■□□□ 1.2
SRSF5-201ENST00000394366 PRDM2Q13029 1718 aa22.5■■□□□ 1.19
SRSF5-201ENST00000394366 URB2Q14146 1524 aaKnown RBP22.43■■□□□ 1.18
SRSF5-201ENST00000394366 ABCC8Q09428 1581 aa22.3■■□□□ 1.16
SRSF5-201ENST00000394366 TOPBP1Q92547 1522 aa22.29■■□□□ 1.16
SRSF5-201ENST00000394366 DNMBPQ6XZF7 1577 aa22.24■■□□□ 1.15
SRSF5-201ENST00000394366 IFT140Q96RY7 1462 aa22.18■■□□□ 1.14
SRSF5-201ENST00000394366 DNAJC5Q9H3Z4 198 aa22.17■■□□□ 1.14
SRSF5-201ENST00000394366 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
SRSF5-201ENST00000394366 POLA1P09884 1462 aaPredicted RBP22.1■■□□□ 1.13
SRSF5-201ENST00000394366 CUX1P39880 1505 aa22.09■■□□□ 1.13
SRSF5-201ENST00000394366 ZNF608Q9ULD9 1512 aaPredicted RBP22.07■■□□□ 1.12
SRSF5-201ENST00000394366 SOGA1O94964 1423 aa22.04■■□□□ 1.12
SRSF5-201ENST00000394366 FGD5Q6ZNL6 1462 aa22.04■■□□□ 1.12
SRSF5-201ENST00000394366 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.11
SRSF5-201ENST00000394366 TARBP1Q13395 1621 aaKnown RBP22.01■■□□□ 1.11
SRSF5-201ENST00000394366 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
SRSF5-201ENST00000394366 AQRO60306 1485 aaKnown RBP eCLIP21.96■■□□□ 1.113e-8■■■■□ 24.7
SRSF5-201ENST00000394366 EIF4G3O43432 1585 aaKnown RBP21.94■■□□□ 1.1
SRSF5-201ENST00000394366 TDRD9Q8NDG6 1382 aaKnown RBP21.93■■□□□ 1.1
SRSF5-201ENST00000394366 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
SRSF5-201ENST00000394366 OSCARQ8IYS5 282 aa21.88■■□□□ 1.09
SRSF5-201ENST00000394366 SYNJ1O43426 1573 aa21.87■■□□□ 1.09
SRSF5-201ENST00000394366 BIVM-ERCC5R4GMW8 1640 aa21.85■■□□□ 1.09
SRSF5-201ENST00000394366 WDR97A6NE52 1622 aa21.84■■□□□ 1.09
SRSF5-201ENST00000394366 ABCA10Q8WWZ4 1543 aa21.82■■□□□ 1.08
SRSF5-201ENST00000394366 GRIN2BQ13224 1484 aa21.77■■□□□ 1.08
SRSF5-201ENST00000394366 GAPVD1Q14C86 1478 aa21.76■■□□□ 1.07
SRSF5-201ENST00000394366 FBLN2P98095 1184 aa21.76■■□□□ 1.07
SRSF5-201ENST00000394366 SNAPC4Q5SXM2 1469 aa21.74■■□□□ 1.07
SRSF5-201ENST00000394366 MAGI1Q96QZ7 1491 aaPredicted RBP21.71■■□□□ 1.07
SRSF5-201ENST00000394366 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
SRSF5-201ENST00000394366 EEA1Q15075 1411 aa21.71■■□□□ 1.07
SRSF5-201ENST00000394366 CHMP7Q8WUX9 453 aaPredicted RBP21.69■■□□□ 1.06
SRSF5-201ENST00000394366 CHD1O14646 1710 aa21.65■■□□□ 1.06
SRSF5-201ENST00000394366 PBRM1Q86U86 1689 aa21.65■■□□□ 1.06
SRSF5-201ENST00000394366 LOC105371045A0A1W2PR82 267 aa21.63■■□□□ 1.05
SRSF5-201ENST00000394366 FAM9AQ8IZU1 332 aaPredicted RBP21.63■■□□□ 1.05
SRSF5-201ENST00000394366 SYNJ2O15056 1496 aa21.63■■□□□ 1.05
SRSF5-201ENST00000394366 ERICH3Q5RHP9 1530 aa21.56■■□□□ 1.04
SRSF5-201ENST00000394366 FHAD1B1AJZ9 1412 aa21.52■■□□□ 1.04
SRSF5-201ENST00000394366 KIF27Q86VH2 1401 aa21.52■■□□□ 1.04
SRSF5-201ENST00000394366 ADAMTS12P58397 1594 aa21.51■■□□□ 1.03
SRSF5-201ENST00000394366 GRIN2AQ12879 1464 aa21.47■■□□□ 1.03
SRSF5-201ENST00000394366 CSRNP3Q8WYN3 585 aa21.47■■□□□ 1.03
SRSF5-201ENST00000394366 ARHGEF11O15085 1522 aa21.46■■□□□ 1.03
SRSF5-201ENST00000394366 CLASP1Q7Z460 1538 aa21.45■■□□□ 1.02
SRSF5-201ENST00000394366 RIMBP3CA6NJZ7 1639 aa21.44■■□□□ 1.02
SRSF5-201ENST00000394366 RIMBP3BA6NNM3 1639 aa21.44■■□□□ 1.02
SRSF5-201ENST00000394366 RIMBP3Q9UFD9 1639 aa21.44■■□□□ 1.02
SRSF5-201ENST00000394366 IGF1RP08069 1367 aa21.44■■□□□ 1.02
SRSF5-201ENST00000394366 RUSC2Q8N2Y8 1516 aa21.42■■□□□ 1.02
SRSF5-201ENST00000394366 NUP160Q12769 1436 aa21.39■■□□□ 1.01
SRSF5-201ENST00000394366 KIF21BO75037 1637 aa21.37■■□□□ 1.01
SRSF5-201ENST00000394366 CEP170Q5SW79 1584 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms