RNA–Protein interactions for RNA: ENST00000592287.5

TNPO2-218, Transcript of transportin 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNPO2, Length 2,914 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-218ENST00000592287 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
TNPO2-218ENST00000592287 PELP1Q8IZL8 1130 aaKnown RBP23.47■■□□□ 1.35
TNPO2-218ENST00000592287 MYT1Q01538 1121 aa22.88■■□□□ 1.25
TNPO2-218ENST00000592287 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
TNPO2-218ENST00000592287 HRCP23327 699 aa22.59■■□□□ 1.21
TNPO2-218ENST00000592287 PPARGC1BQ86YN6 1023 aaKnown RBP22.21■■□□□ 1.15
TNPO2-218ENST00000592287 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
TNPO2-218ENST00000592287 SLC24A1O60721 1099 aa22.16■■□□□ 1.14
TNPO2-218ENST00000592287 SCAF1Q9H7N4 1312 aaKnown RBP22.08■■□□□ 1.13
TNPO2-218ENST00000592287 SHROOM4Q9ULL8 1493 aa22■■□□□ 1.11
TNPO2-218ENST00000592287 DCAF8L2P0C7V8 631 aa21.99■■□□□ 1.11
TNPO2-218ENST00000592287 TTBK1Q5TCY1 1321 aaPredicted RBP21.78■■□□□ 1.08
TNPO2-218ENST00000592287 ABCC9O60706 1549 aa21.67■■□□□ 1.06
TNPO2-218ENST00000592287 PCGF6Q9BYE7 350 aa21.66■■□□□ 1.06
TNPO2-218ENST00000592287 DCAF1Q9Y4B6 1507 aa21.64■■□□□ 1.05
TNPO2-218ENST00000592287 PRKCSHP14314 528 aaPredicted RBP21.49■■□□□ 1.03
TNPO2-218ENST00000592287 BCL11AQ9H165 835 aa21.41■■□□□ 1.02
TNPO2-218ENST00000592287 SUPT5HO00267 1087 aaKnown RBP21.32■■□□□ 1
TNPO2-218ENST00000592287 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
TNPO2-218ENST00000592287 FAM9AQ8IZU1 332 aaPredicted RBP21.22■□□□□ 0.99
TNPO2-218ENST00000592287 ACIN1Q9UKV3 1341 aaKnown RBP21.14■□□□□ 0.97
TNPO2-218ENST00000592287 NACADO15069 1562 aa21.13■□□□□ 0.97
TNPO2-218ENST00000592287 SCRIBQ14160 1630 aa21.13■□□□□ 0.97
TNPO2-218ENST00000592287 GTF3C3Q9Y5Q9 886 aa21.09■□□□□ 0.97
TNPO2-218ENST00000592287 RB1CC1Q8TDY2 1594 aa21.07■□□□□ 0.96
TNPO2-218ENST00000592287 NEUROD1Q13562 356 aa21.06■□□□□ 0.96
TNPO2-218ENST00000592287 CENPBP07199 599 aaPredicted RBP21.01■□□□□ 0.95
TNPO2-218ENST00000592287 ERICH6Q7L0X2 663 aa20.86■□□□□ 0.93
TNPO2-218ENST00000592287 ZEB1P37275 1124 aaPredicted RBP20.77■□□□□ 0.92
TNPO2-218ENST00000592287 UNC13AQ9UPW8 1703 aa20.74■□□□□ 0.91
TNPO2-218ENST00000592287 APLP2Q06481 763 aa20.71■□□□□ 0.91
TNPO2-218ENST00000592287 EHMT2Q96KQ7 1210 aa20.64■□□□□ 0.89
TNPO2-218ENST00000592287 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
TNPO2-218ENST00000592287 ANP32EQ9BTT0 268 aa20.59■□□□□ 0.89
TNPO2-218ENST00000592287 CECR2Q9BXF3 1484 aa20.57■□□□□ 0.88
TNPO2-218ENST00000592287 TRIM26Q12899 539 aaPredicted RBP20.53■□□□□ 0.88
TNPO2-218ENST00000592287 BICRAQ9NZM4 1560 aa20.47■□□□□ 0.87
TNPO2-218ENST00000592287 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
TNPO2-218ENST00000592287 CSRNP3Q8WYN3 585 aa20.46■□□□□ 0.87
TNPO2-218ENST00000592287 MROH2BQ7Z745 1585 aa20.44■□□□□ 0.86
TNPO2-218ENST00000592287 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.869e-7■□□□□ 8.3
TNPO2-218ENST00000592287 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
TNPO2-218ENST00000592287 WIZO95785 1651 aa20.3■□□□□ 0.84
TNPO2-218ENST00000592287 BAZ1AQ9NRL2 1556 aaPredicted RBP20.28■□□□□ 0.84
TNPO2-218ENST00000592287 SMARCA4P51532 1647 aa20.18■□□□□ 0.82
TNPO2-218ENST00000592287 DIEXFQ68CQ4 756 aaKnown RBP20.17■□□□□ 0.82
TNPO2-218ENST00000592287 YTHDC1Q96MU7 727 aaKnown RBP20.11■□□□□ 0.81
TNPO2-218ENST00000592287 LOC105371045A0A1W2PR82 267 aa20.04■□□□□ 0.8
TNPO2-218ENST00000592287 DAXXQ9UER7 740 aaPredicted RBP20.03■□□□□ 0.8
TNPO2-218ENST00000592287 RTN4Q9NQC3 1192 aaKnown RBP20.01■□□□□ 0.79
TNPO2-218ENST00000592287 ANO8Q9HCE9 1232 aaPredicted RBP20■□□□□ 0.79
TNPO2-218ENST00000592287 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
TNPO2-218ENST00000592287 TSHZ2Q9NRE2 1034 aa19.98■□□□□ 0.79
TNPO2-218ENST00000592287 TRIM41Q8WV44 630 aa19.93■□□□□ 0.78
TNPO2-218ENST00000592287 CCDC88BA6NC98 1476 aa19.88■□□□□ 0.77
TNPO2-218ENST00000592287 EIF4G1Q04637 1599 aaKnown RBP19.86■□□□□ 0.77
TNPO2-218ENST00000592287 SMARCA2P51531 1590 aa19.85■□□□□ 0.77
TNPO2-218ENST00000592287 PEG3Q9GZU2 1588 aa19.83■□□□□ 0.76
TNPO2-218ENST00000592287 ATAD2BQ9ULI0 1458 aa19.8■□□□□ 0.76
TNPO2-218ENST00000592287 SUPT16HQ9Y5B9 1047 aaKnown RBP19.74■□□□□ 0.75
TNPO2-218ENST00000592287 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
TNPO2-218ENST00000592287 CC2D2AQ9P2K1 1620 aa19.71■□□□□ 0.75
TNPO2-218ENST00000592287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.66■□□□□ 0.74
TNPO2-218ENST00000592287 CCER1Q8TC90 406 aaPredicted RBP19.65■□□□□ 0.74
TNPO2-218ENST00000592287 UBE2Q2Q8WVN8 375 aa19.64■□□□□ 0.73
TNPO2-218ENST00000592287 EIF5BO60841 1220 aaKnown RBP19.64■□□□□ 0.73
TNPO2-218ENST00000592287 ABCC8Q09428 1581 aa19.63■□□□□ 0.73
TNPO2-218ENST00000592287 SALL2Q9Y467 1007 aaPredicted RBP19.62■□□□□ 0.73
TNPO2-218ENST00000592287 CCDC136Q96JN2 1154 aa19.61■□□□□ 0.73
TNPO2-218ENST00000592287 DNAJC5BQ9UF47 199 aa19.59■□□□□ 0.73
TNPO2-218ENST00000592287 MIER1Q8N108 512 aa19.55■□□□□ 0.72
TNPO2-218ENST00000592287 NCBP3Q53F19 620 aaKnown RBP19.55■□□□□ 0.72
TNPO2-218ENST00000592287 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
TNPO2-218ENST00000592287 CLSPNQ9HAW4 1339 aa19.49■□□□□ 0.71
TNPO2-218ENST00000592287 HMGXB3Q12766 1538 aa19.47■□□□□ 0.71
TNPO2-218ENST00000592287 ZNF316A6NFI3 1004 aaPredicted RBP19.46■□□□□ 0.71
TNPO2-218ENST00000592287 RBM19Q9Y4C8 960 aaKnown RBP19.4■□□□□ 0.7
TNPO2-218ENST00000592287 WRNQ14191 1432 aaPredicted RBP eCLIP19.39■□□□□ 0.69
TNPO2-218ENST00000592287 DEKP35659 375 aaKnown RBP19.38■□□□□ 0.69
TNPO2-218ENST00000592287 PLEKHG5O94827 1062 aa19.38■□□□□ 0.69
TNPO2-218ENST00000592287 MSH5O43196 834 aa19.36■□□□□ 0.69
TNPO2-218ENST00000592287 SOGA1O94964 1423 aa19.34■□□□□ 0.69
TNPO2-218ENST00000592287 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.32■□□□□ 0.68
TNPO2-218ENST00000592287 SYNJ1O43426 1573 aa19.3■□□□□ 0.68
TNPO2-218ENST00000592287 BCANQ96GW7 911 aa19.3■□□□□ 0.68
TNPO2-218ENST00000592287 RUSC2Q8N2Y8 1516 aa19.27■□□□□ 0.68
TNPO2-218ENST00000592287 PKNOX2Q96KN3 472 aa19.27■□□□□ 0.67
TNPO2-218ENST00000592287 ERICH6BQ5W0A0 696 aa19.24■□□□□ 0.67
TNPO2-218ENST00000592287 MYT1LQ9UL68 1186 aa19.22■□□□□ 0.67
TNPO2-218ENST00000592287 CFTRP13569 1480 aa19.21■□□□□ 0.66
TNPO2-218ENST00000592287 EEA1Q15075 1411 aa19.17■□□□□ 0.66
TNPO2-218ENST00000592287 KCNA4P22459 653 aa19.15■□□□□ 0.66
TNPO2-218ENST00000592287 TOP2BQ02880 1626 aa19.13■□□□□ 0.65
TNPO2-218ENST00000592287 PODXL2Q9NZ53 605 aa19.12■□□□□ 0.65
TNPO2-218ENST00000592287 CADPSQ9ULU8 1353 aa19.11■□□□□ 0.65
TNPO2-218ENST00000592287 UBTFP17480 764 aaKnown RBP19.07■□□□□ 0.64
TNPO2-218ENST00000592287 CUX1P39880 1505 aa19.07■□□□□ 0.64
TNPO2-218ENST00000592287 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
TNPO2-218ENST00000592287 IL27Q8NEV9 243 aa19.04■□□□□ 0.64
TNPO2-218ENST00000592287 TIMELESSQ9UNS1 1208 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms