RNA–Protein interactions for RNA: ENST00000375633.5

C6orf48-201, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-201ENST00000375633 AEBP2Q6ZN18 517 aaPredicted RBP25.05■■□□□ 1.6
C6orf48-201ENST00000375633 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
C6orf48-201ENST00000375633 SENP3Q9H4L4 574 aaPredicted RBP21.49■■□□□ 1.03
C6orf48-201ENST00000375633 PHF23Q9BUL5 403 aaPredicted RBP21.08■□□□□ 0.97
C6orf48-201ENST00000375633 FOXD1Q16676 465 aa20.1■□□□□ 0.81
C6orf48-201ENST00000375633 POTEDQ86YR6 584 aa19.85■□□□□ 0.77
C6orf48-201ENST00000375633 MSH5O43196 834 aa19.1■□□□□ 0.65
C6orf48-201ENST00000375633 NISCHQ9Y2I1 1504 aa18.65■□□□□ 0.58
C6orf48-201ENST00000375633 PIAS4Q8N2W9 510 aaPredicted RBP18.59■□□□□ 0.57
C6orf48-201ENST00000375633 PPP6R1Q9UPN7 881 aa18.23■□□□□ 0.51
C6orf48-201ENST00000375633 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
C6orf48-201ENST00000375633 ADRA2BP18089 450 aa18.11■□□□□ 0.49
C6orf48-201ENST00000375633 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
C6orf48-201ENST00000375633 MAPK8IP2Q13387 824 aaPredicted RBP16.85■□□□□ 0.29
C6orf48-201ENST00000375633 CACNB1Q02641 598 aaPredicted RBP16.78■□□□□ 0.28
C6orf48-201ENST00000375633 SCAF1Q9H7N4 1312 aaKnown RBP16.6■□□□□ 0.25
C6orf48-201ENST00000375633 CCDC180Q9P1Z9 1646 aa16.46■□□□□ 0.23
C6orf48-201ENST00000375633 RNF39Q9H2S5 420 aa16.24■□□□□ 0.19
C6orf48-201ENST00000375633 DCAF8L1A6NGE4 600 aa16.19■□□□□ 0.18
C6orf48-201ENST00000375633 ABCC9O60706 1549 aa16.17■□□□□ 0.18
C6orf48-201ENST00000375633 HOXD11P31277 338 aaPredicted RBP16.04■□□□□ 0.16
C6orf48-201ENST00000375633 C1QBPQ07021 282 aaKnown RBP15.96■□□□□ 0.15
C6orf48-201ENST00000375633 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
C6orf48-201ENST00000375633 DCAF8L2P0C7V8 631 aa15.74■□□□□ 0.11
C6orf48-201ENST00000375633 RNF216Q9NWF9 866 aaPredicted RBP15.71■□□□□ 0.11
C6orf48-201ENST00000375633 CNKSR2Q8WXI2 1034 aa15.67■□□□□ 0.1
C6orf48-201ENST00000375633 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
C6orf48-201ENST00000375633 ZCCHC6Q5VYS8 1495 aaKnown RBP15.54■□□□□ 0.08
C6orf48-201ENST00000375633 RB1CC1Q8TDY2 1594 aa15.49■□□□□ 0.07
C6orf48-201ENST00000375633 NACADO15069 1562 aa15.48■□□□□ 0.07
C6orf48-201ENST00000375633 POTEHQ6S545 545 aa15.4■□□□□ 0.06
C6orf48-201ENST00000375633 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
C6orf48-201ENST00000375633 DCAF1Q9Y4B6 1507 aa15.35■□□□□ 0.05
C6orf48-201ENST00000375633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.22■□□□□ 0.031e-10■□□□□ 10.7
C6orf48-201ENST00000375633 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
C6orf48-201ENST00000375633 UNC13AQ9UPW8 1703 aa15.17■□□□□ 0.02
C6orf48-201ENST00000375633 SCRIBQ14160 1630 aa15.16■□□□□ 0.02
C6orf48-201ENST00000375633 BICRAQ9NZM4 1560 aa15.05■□□□□ -0
C6orf48-201ENST00000375633 SHROOM4Q9ULL8 1493 aa14.97□□□□□ -0.01
C6orf48-201ENST00000375633 DSG3P32926 999 aa14.95□□□□□ -0.02
C6orf48-201ENST00000375633 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
C6orf48-201ENST00000375633 U3KPZ7 1027 aaPredicted RBP14.86□□□□□ -0.03
C6orf48-201ENST00000375633 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
C6orf48-201ENST00000375633 CAPN15O75808 1086 aa14.82□□□□□ -0.04
C6orf48-201ENST00000375633 NPM3O75607 178 aaKnown RBP14.75□□□□□ -0.05
C6orf48-201ENST00000375633 EIF4G1Q04637 1599 aaKnown RBP14.64□□□□□ -0.07
C6orf48-201ENST00000375633 CECR2Q9BXF3 1484 aa14.58□□□□□ -0.08
C6orf48-201ENST00000375633 CC2D2AQ9P2K1 1620 aa14.57□□□□□ -0.08
C6orf48-201ENST00000375633 SMARCA4P51532 1647 aa14.45□□□□□ -0.1
C6orf48-201ENST00000375633 BAZ1AQ9NRL2 1556 aaPredicted RBP14.43□□□□□ -0.1
C6orf48-201ENST00000375633 ABCB7O75027 752 aa14.42□□□□□ -0.1
C6orf48-201ENST00000375633 MROH2BQ7Z745 1585 aa14.42□□□□□ -0.1
C6orf48-201ENST00000375633 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
C6orf48-201ENST00000375633 ZNF219Q9P2Y4 722 aaPredicted RBP14.4□□□□□ -0.1
C6orf48-201ENST00000375633 APLP2Q06481 763 aa14.37□□□□□ -0.11
C6orf48-201ENST00000375633 ATAD2BQ9ULI0 1458 aa14.36□□□□□ -0.11
C6orf48-201ENST00000375633 NCAPD3P42695 1498 aa14.3□□□□□ -0.12
C6orf48-201ENST00000375633 SMARCA2P51531 1590 aa14.3□□□□□ -0.12
C6orf48-201ENST00000375633 RBM42Q9BTD8 480 aaKnown RBP14.29□□□□□ -0.12
C6orf48-201ENST00000375633 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
C6orf48-201ENST00000375633 WIZO95785 1651 aa14.28□□□□□ -0.12
C6orf48-201ENST00000375633 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
C6orf48-201ENST00000375633 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
C6orf48-201ENST00000375633 CHRDL2Q6WN34 429 aa14.25□□□□□ -0.13
C6orf48-201ENST00000375633 PEG3Q9GZU2 1588 aa14.24□□□□□ -0.13
C6orf48-201ENST00000375633 HMGXB3Q12766 1538 aa14.2□□□□□ -0.14
C6orf48-201ENST00000375633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.18□□□□□ -0.14
C6orf48-201ENST00000375633 HNRNPUL2Q1KMD3 747 aaKnown RBP14.18□□□□□ -0.14
C6orf48-201ENST00000375633 SUPT5HO00267 1087 aaKnown RBP14.14□□□□□ -0.15
C6orf48-201ENST00000375633 SP7Q8TDD2 431 aaPredicted RBP14.11□□□□□ -0.15
C6orf48-201ENST00000375633 TOP2AP11388 1531 aaKnown RBP14.08□□□□□ -0.16
C6orf48-201ENST00000375633 SAMD1Q6SPF0 538 aaPredicted RBP14.07□□□□□ -0.16
C6orf48-201ENST00000375633 NESP48681 1621 aa14.03□□□□□ -0.16
C6orf48-201ENST00000375633 CCDC88BA6NC98 1476 aa13.96□□□□□ -0.17
C6orf48-201ENST00000375633 CADPSQ9ULU8 1353 aa13.93□□□□□ -0.18
C6orf48-201ENST00000375633 ERCC6Q03468 1493 aa13.9□□□□□ -0.18
C6orf48-201ENST00000375633 LAMC3Q9Y6N6 1575 aa13.89□□□□□ -0.19
C6orf48-201ENST00000375633 POLA2Q14181 598 aa13.89□□□□□ -0.19
C6orf48-201ENST00000375633 CFTRP13569 1480 aa13.84□□□□□ -0.19
C6orf48-201ENST00000375633 PDS5BQ9NTI5 1447 aa13.82□□□□□ -0.2
C6orf48-201ENST00000375633 KCNA4P22459 653 aa13.82□□□□□ -0.2
C6orf48-201ENST00000375633 KIF21AQ7Z4S6 1674 aa13.82□□□□□ -0.2
C6orf48-201ENST00000375633 AKT1S1Q96B36 256 aa13.81□□□□□ -0.2
C6orf48-201ENST00000375633 FANCD2Q9BXW9 1451 aa13.78□□□□□ -0.2
C6orf48-201ENST00000375633 PIP4P2Q8N4L2 257 aa13.76□□□□□ -0.21
C6orf48-201ENST00000375633 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
C6orf48-201ENST00000375633 THOC2Q8NI27 1593 aaKnown RBP13.71□□□□□ -0.22
C6orf48-201ENST00000375633 PRDM2Q13029 1718 aa13.7□□□□□ -0.22
C6orf48-201ENST00000375633 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
C6orf48-201ENST00000375633 HAX1O00165 279 aa13.67□□□□□ -0.22
C6orf48-201ENST00000375633 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
C6orf48-201ENST00000375633 REM2Q8IYK8 340 aaPredicted RBP13.66□□□□□ -0.22
C6orf48-201ENST00000375633 URB2Q14146 1524 aaKnown RBP13.64□□□□□ -0.23
C6orf48-201ENST00000375633 CUX2O14529 1486 aa13.63□□□□□ -0.23
C6orf48-201ENST00000375633 WDR62O43379 1518 aa13.61□□□□□ -0.23
C6orf48-201ENST00000375633 FXR2P51116 673 aaKnown RBP eCLIP13.58□□□□□ -0.24
C6orf48-201ENST00000375633 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
C6orf48-201ENST00000375633 TOPBP1Q92547 1522 aa13.56□□□□□ -0.24
C6orf48-201ENST00000375633 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
C6orf48-201ENST00000375633 DNMBPQ6XZF7 1577 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms