RNA–Protein interactions for RNA: ENST00000563473.1

RPL4-204, Transcript of ribosomal protein L4, humanhuman

TSL 3

Gene RPL4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-204ENST00000563473 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
RPL4-204ENST00000563473 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
RPL4-204ENST00000563473 SENP3Q9H4L4 574 aaPredicted RBP16.66■□□□□ 0.26
RPL4-204ENST00000563473 PHF23Q9BUL5 403 aaPredicted RBP16.38■□□□□ 0.21
RPL4-204ENST00000563473 FOXD1Q16676 465 aa15.49■□□□□ 0.07
RPL4-204ENST00000563473 PLPPR3Q6T4P5 718 aa14.7□□□□□ -0.06
RPL4-204ENST00000563473 MSH5O43196 834 aa14.58□□□□□ -0.08
RPL4-204ENST00000563473 PIAS4Q8N2W9 510 aaPredicted RBP14.46□□□□□ -0.09
RPL4-204ENST00000563473 PPP6R1Q9UPN7 881 aa14.4□□□□□ -0.1
RPL4-204ENST00000563473 ADRA2BP18089 450 aa14.34□□□□□ -0.11
RPL4-204ENST00000563473 POTEDQ86YR6 584 aa14.32□□□□□ -0.12
RPL4-204ENST00000563473 NISCHQ9Y2I1 1504 aa14.08□□□□□ -0.16
RPL4-204ENST00000563473 DMRT2Q9Y5R5 561 aa13.2□□□□□ -0.3
RPL4-204ENST00000563473 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
RPL4-204ENST00000563473 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
RPL4-204ENST00000563473 ABCC9O60706 1549 aa12.9□□□□□ -0.34
RPL4-204ENST00000563473 PPP4R3CPQ6ZMV5 832 aa12.85□□□□□ -0.35
RPL4-204ENST00000563473 CCDC180Q9P1Z9 1646 aa12.73□□□□□ -0.37
RPL4-204ENST00000563473 HOXD11P31277 338 aaPredicted RBP12.69□□□□□ -0.38
RPL4-204ENST00000563473 CNKSR2Q8WXI2 1034 aa12.65□□□□□ -0.38
RPL4-204ENST00000563473 DCAF8L1A6NGE4 600 aa12.57□□□□□ -0.4
RPL4-204ENST00000563473 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
RPL4-204ENST00000563473 CACNB1Q02641 598 aaPredicted RBP12.5□□□□□ -0.41
RPL4-204ENST00000563473 RNF39Q9H2S5 420 aa12.42□□□□□ -0.42
RPL4-204ENST00000563473 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
RPL4-204ENST00000563473 DNAJC5BQ9UF47 199 aa12.33□□□□□ -0.44
RPL4-204ENST00000563473 C1QBPQ07021 282 aaKnown RBP12.24□□□□□ -0.45
RPL4-204ENST00000563473 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
RPL4-204ENST00000563473 DCAF8L2P0C7V8 631 aa12.19□□□□□ -0.46
RPL4-204ENST00000563473 NPM3O75607 178 aaKnown RBP12.16□□□□□ -0.46
RPL4-204ENST00000563473 SLC24A1O60721 1099 aa12.08□□□□□ -0.48
RPL4-204ENST00000563473 NACADO15069 1562 aa12.05□□□□□ -0.48
RPL4-204ENST00000563473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.487e-37■■□□□ 12
RPL4-204ENST00000563473 PABPN1Q86U42 306 aaKnown RBP eCLIP12□□□□□ -0.49
RPL4-204ENST00000563473 EHMT2Q96KQ7 1210 aa11.98□□□□□ -0.49
RPL4-204ENST00000563473 UNC13AQ9UPW8 1703 aa11.92□□□□□ -0.5
RPL4-204ENST00000563473 KCNA4P22459 653 aa11.84□□□□□ -0.51
RPL4-204ENST00000563473 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
RPL4-204ENST00000563473 MYO15BQ96JP2 1530 aa11.75□□□□□ -0.53
RPL4-204ENST00000563473 BICRAQ9NZM4 1560 aa11.75□□□□□ -0.53
RPL4-204ENST00000563473 SCRIBQ14160 1630 aa11.66□□□□□ -0.54
RPL4-204ENST00000563473 SLC4A2P04920 1241 aa11.63□□□□□ -0.55
RPL4-204ENST00000563473 ZCCHC6Q5VYS8 1495 aaKnown RBP11.63□□□□□ -0.55
RPL4-204ENST00000563473 SPINK5Q9NQ38 1064 aaPredicted RBP11.62□□□□□ -0.55
RPL4-204ENST00000563473 CC2D2AQ9P2K1 1620 aa11.61□□□□□ -0.55
RPL4-204ENST00000563473 CECR2Q9BXF3 1484 aa11.61□□□□□ -0.55
RPL4-204ENST00000563473 CAPN15O75808 1086 aa11.6□□□□□ -0.55
RPL4-204ENST00000563473 DSG3P32926 999 aa11.59□□□□□ -0.55
RPL4-204ENST00000563473 SHROOM4Q9ULL8 1493 aa11.58□□□□□ -0.56
RPL4-204ENST00000563473 DCAF1Q9Y4B6 1507 aa11.56□□□□□ -0.56
RPL4-204ENST00000563473 EIF4G1Q04637 1599 aaKnown RBP11.54□□□□□ -0.56
RPL4-204ENST00000563473 APLP2Q06481 763 aa11.5□□□□□ -0.57
RPL4-204ENST00000563473 CSRNP3Q8WYN3 585 aa11.48□□□□□ -0.57
RPL4-204ENST00000563473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.47□□□□□ -0.57
RPL4-204ENST00000563473 HNRNPUL2Q1KMD3 747 aaKnown RBP11.47□□□□□ -0.57
RPL4-204ENST00000563473 ZNF219Q9P2Y4 722 aaPredicted RBP11.43□□□□□ -0.58
RPL4-204ENST00000563473 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
RPL4-204ENST00000563473 TRHP20396 242 aaPredicted RBP11.38□□□□□ -0.59
RPL4-204ENST00000563473 ABCB7O75027 752 aa11.31□□□□□ -0.6
RPL4-204ENST00000563473 SLC4A1APQ9BWU0 796 aaKnown RBP11.29□□□□□ -0.6
RPL4-204ENST00000563473 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
RPL4-204ENST00000563473 DNAJC5Q9H3Z4 198 aa11.23□□□□□ -0.61
RPL4-204ENST00000563473 ERCC6Q03468 1493 aa11.22□□□□□ -0.61
RPL4-204ENST00000563473 POTEHQ6S545 545 aa11.21□□□□□ -0.61
RPL4-204ENST00000563473 AMER1Q5JTC6 1135 aaPredicted RBP11.13□□□□□ -0.63
RPL4-204ENST00000563473 CUX2O14529 1486 aa11.12□□□□□ -0.63
RPL4-204ENST00000563473 FOXD4L1Q9NU39 408 aa11.11□□□□□ -0.63
RPL4-204ENST00000563473 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
RPL4-204ENST00000563473 POLA2Q14181 598 aa11.08□□□□□ -0.64
RPL4-204ENST00000563473 NCAPD3P42695 1498 aa11.07□□□□□ -0.64
RPL4-204ENST00000563473 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
RPL4-204ENST00000563473 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
RPL4-204ENST00000563473 SMARCA4P51532 1647 aa11.05□□□□□ -0.64
RPL4-204ENST00000563473 ATAD2BQ9ULI0 1458 aa11.05□□□□□ -0.64
RPL4-204ENST00000563473 BAZ1BQ9UIG0 1483 aaKnown RBP11.02□□□□□ -0.65
RPL4-204ENST00000563473 HMGXB3Q12766 1538 aa11.01□□□□□ -0.65
RPL4-204ENST00000563473 NESP48681 1621 aa11.01□□□□□ -0.65
RPL4-204ENST00000563473 BAZ1AQ9NRL2 1556 aaPredicted RBP10.99□□□□□ -0.65
RPL4-204ENST00000563473 ATF5Q9Y2D1 282 aaPredicted RBP10.96□□□□□ -0.65
RPL4-204ENST00000563473 LAMC3Q9Y6N6 1575 aa10.92□□□□□ -0.66
RPL4-204ENST00000563473 ZBTB12Q9Y330 459 aaPredicted RBP10.92□□□□□ -0.66
RPL4-204ENST00000563473 KIF21AQ7Z4S6 1674 aa10.91□□□□□ -0.66
RPL4-204ENST00000563473 ZBTB22O15209 634 aa10.89□□□□□ -0.67
RPL4-204ENST00000563473 PDS5BQ9NTI5 1447 aa10.89□□□□□ -0.67
RPL4-204ENST00000563473 THOC2Q8NI27 1593 aaKnown RBP10.89□□□□□ -0.67
RPL4-204ENST00000563473 TRIM41Q8WV44 630 aa10.87□□□□□ -0.67
RPL4-204ENST00000563473 MROH2BQ7Z745 1585 aa10.86□□□□□ -0.67
RPL4-204ENST00000563473 PEG3Q9GZU2 1588 aa10.86□□□□□ -0.67
RPL4-204ENST00000563473 CHRDL2Q6WN34 429 aa10.85□□□□□ -0.67
RPL4-204ENST00000563473 AKT1S1Q96B36 256 aa10.81□□□□□ -0.68
RPL4-204ENST00000563473 ATXN8OSP0DMR3 200 aa10.8□□□□□ -0.68
RPL4-204ENST00000563473 CADPSQ9ULU8 1353 aa10.78□□□□□ -0.68
RPL4-204ENST00000563473 MRC2Q9UBG0 1479 aa10.78□□□□□ -0.68
RPL4-204ENST00000563473 WIZO95785 1651 aa10.78□□□□□ -0.68
RPL4-204ENST00000563473 OSCARQ8IYS5 282 aa10.75□□□□□ -0.69
RPL4-204ENST00000563473 CEP164Q9UPV0 1460 aa10.74□□□□□ -0.69
RPL4-204ENST00000563473 DAXXQ9UER7 740 aaPredicted RBP10.74□□□□□ -0.69
RPL4-204ENST00000563473 WDR62O43379 1518 aa10.72□□□□□ -0.69
RPL4-204ENST00000563473 FANCD2Q9BXW9 1451 aa10.69□□□□□ -0.7
RPL4-204ENST00000563473 REM2Q8IYK8 340 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms