RNA–Protein interactions for RNA: ENST00000553635.5

SRSF5-205, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2 BASIC

Gene SRSF5, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-205ENST00000553635 AEBP2Q6ZN18 517 aaPredicted RBP37.12■■■■□ 3.53
SRSF5-205ENST00000553635 CHIC1Q5VXU3 224 aa35.6■■■■□ 3.29
SRSF5-205ENST00000553635 SENP3Q9H4L4 574 aaPredicted RBP31.7■■■□□ 2.67
SRSF5-205ENST00000553635 PHF23Q9BUL5 403 aaPredicted RBP31.34■■■□□ 2.61
SRSF5-205ENST00000553635 FOXD1Q16676 465 aa29.47■■■□□ 2.31
SRSF5-205ENST00000553635 PLPPR3Q6T4P5 718 aa28.64■■■□□ 2.18
SRSF5-205ENST00000553635 PPP6R1Q9UPN7 881 aa27.78■■■□□ 2.04
SRSF5-205ENST00000553635 ADRA2BP18089 450 aa27.75■■■□□ 2.03
SRSF5-205ENST00000553635 PIAS4Q8N2W9 510 aaPredicted RBP27.67■■■□□ 2.02
SRSF5-205ENST00000553635 MSH5O43196 834 aa27.51■■□□□ 1.99
SRSF5-205ENST00000553635 NISCHQ9Y2I1 1504 aa27.06■■□□□ 1.92
SRSF5-205ENST00000553635 POTEDQ86YR6 584 aa26.28■■□□□ 1.8
SRSF5-205ENST00000553635 SCAF1Q9H7N4 1312 aaKnown RBP25.48■■□□□ 1.67
SRSF5-205ENST00000553635 MAPK8IP2Q13387 824 aaPredicted RBP25.4■■□□□ 1.66
SRSF5-205ENST00000553635 DMRT2Q9Y5R5 561 aa25.15■■□□□ 1.62
SRSF5-205ENST00000553635 PPP4R3CPQ6ZMV5 832 aa25.14■■□□□ 1.62
SRSF5-205ENST00000553635 CNKSR2Q8WXI2 1034 aa24.61■■□□□ 1.53
SRSF5-205ENST00000553635 HOXD11P31277 338 aaPredicted RBP24.34■■□□□ 1.49
SRSF5-205ENST00000553635 NCBP3Q53F19 620 aaKnown RBP24.34■■□□□ 1.49
SRSF5-205ENST00000553635 RNF216Q9NWF9 866 aaPredicted RBP24.27■■□□□ 1.48
SRSF5-205ENST00000553635 DCAF8L1A6NGE4 600 aa24.26■■□□□ 1.47
SRSF5-205ENST00000553635 CCDC180Q9P1Z9 1646 aa24.07■■□□□ 1.44
SRSF5-205ENST00000553635 NPM3O75607 178 aaKnown RBP23.89■■□□□ 1.41
SRSF5-205ENST00000553635 ABCC9O60706 1549 aa23.82■■□□□ 1.4
SRSF5-205ENST00000553635 KCNA4P22459 653 aa23.71■■□□□ 1.39
SRSF5-205ENST00000553635 CACNB1Q02641 598 aaPredicted RBP23.47■■□□□ 1.35
SRSF5-205ENST00000553635 RNF39Q9H2S5 420 aa23.45■■□□□ 1.34
SRSF5-205ENST00000553635 DNAJC5BQ9UF47 199 aa23.42■■□□□ 1.34
SRSF5-205ENST00000553635 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.32■■□□□ 1.322e-16■■□□□ 13.2
SRSF5-205ENST00000553635 C1QBPQ07021 282 aaKnown RBP23.17■■□□□ 1.3
SRSF5-205ENST00000553635 RB1CC1Q8TDY2 1594 aa22.77■■□□□ 1.23
SRSF5-205ENST00000553635 U3KPZ7 1027 aaPredicted RBP22.74■■□□□ 1.23
SRSF5-205ENST00000553635 DCAF8L2P0C7V8 631 aa22.72■■□□□ 1.23
SRSF5-205ENST00000553635 NACADO15069 1562 aa22.7■■□□□ 1.22
SRSF5-205ENST00000553635 SLC4A2P04920 1241 aa22.7■■□□□ 1.22
SRSF5-205ENST00000553635 SLC4A1APQ9BWU0 796 aaKnown RBP22.5■■□□□ 1.19
SRSF5-205ENST00000553635 MYO15BQ96JP2 1530 aa22.5■■□□□ 1.19
SRSF5-205ENST00000553635 ZCCHC6Q5VYS8 1495 aaKnown RBP22.5■■□□□ 1.19
SRSF5-205ENST00000553635 CAPN15O75808 1086 aa22.39■■□□□ 1.17
SRSF5-205ENST00000553635 SPINK5Q9NQ38 1064 aaPredicted RBP22.35■■□□□ 1.17
SRSF5-205ENST00000553635 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
SRSF5-205ENST00000553635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.31■■□□□ 1.16
SRSF5-205ENST00000553635 HNRNPUL2Q1KMD3 747 aaKnown RBP22.31■■□□□ 1.16
SRSF5-205ENST00000553635 APLP2Q06481 763 aa22.27■■□□□ 1.16
SRSF5-205ENST00000553635 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.165e-9■■■■□ 23.4
SRSF5-205ENST00000553635 UNC13AQ9UPW8 1703 aa22.24■■□□□ 1.15
SRSF5-205ENST00000553635 SAMD1Q6SPF0 538 aaPredicted RBP22.18■■□□□ 1.14
SRSF5-205ENST00000553635 BICRAQ9NZM4 1560 aa22.14■■□□□ 1.14
SRSF5-205ENST00000553635 MYCNP04198 464 aaPredicted RBP22.12■■□□□ 1.13
SRSF5-205ENST00000553635 TRHP20396 242 aaPredicted RBP22.1■■□□□ 1.13
SRSF5-205ENST00000553635 DSG3P32926 999 aa22.08■■□□□ 1.13
SRSF5-205ENST00000553635 FOXD4L1Q9NU39 408 aa22.06■■□□□ 1.12
SRSF5-205ENST00000553635 ZNF219Q9P2Y4 722 aaPredicted RBP22.03■■□□□ 1.12
SRSF5-205ENST00000553635 SCRIBQ14160 1630 aa22.01■■□□□ 1.11
SRSF5-205ENST00000553635 ABCB7O75027 752 aa21.86■■□□□ 1.09
SRSF5-205ENST00000553635 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
SRSF5-205ENST00000553635 ZBTB22O15209 634 aa21.74■■□□□ 1.07
SRSF5-205ENST00000553635 EIF4G1Q04637 1599 aaKnown RBP21.55■■□□□ 1.04
SRSF5-205ENST00000553635 POLA2Q14181 598 aa21.55■■□□□ 1.04
SRSF5-205ENST00000553635 ATF5Q9Y2D1 282 aaPredicted RBP21.54■■□□□ 1.04
SRSF5-205ENST00000553635 CC2D2AQ9P2K1 1620 aa21.5■■□□□ 1.03
SRSF5-205ENST00000553635 CECR2Q9BXF3 1484 aa21.41■■□□□ 1.02
SRSF5-205ENST00000553635 ATXN8OSP0DMR3 200 aa21.34■■□□□ 1.01
SRSF5-205ENST00000553635 ZBTB12Q9Y330 459 aaPredicted RBP21.14■□□□□ 0.98
SRSF5-205ENST00000553635 RBM42Q9BTD8 480 aaKnown RBP21.12■□□□□ 0.97
SRSF5-205ENST00000553635 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.97
SRSF5-205ENST00000553635 EHMT2Q96KQ7 1210 aa21.06■□□□□ 0.96
SRSF5-205ENST00000553635 SMARCA4P51532 1647 aa21.02■□□□□ 0.96
SRSF5-205ENST00000553635 NCAPD3P42695 1498 aa20.99■□□□□ 0.95
SRSF5-205ENST00000553635 ATAD2BQ9ULI0 1458 aa20.98■□□□□ 0.95
SRSF5-205ENST00000553635 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
SRSF5-205ENST00000553635 BAZ1AQ9NRL2 1556 aaPredicted RBP20.95■□□□□ 0.94
SRSF5-205ENST00000553635 SMARCA2P51531 1590 aa20.9■□□□□ 0.94
SRSF5-205ENST00000553635 MROH2BQ7Z745 1585 aa20.87■□□□□ 0.93
SRSF5-205ENST00000553635 HMGXB3Q12766 1538 aa20.83■□□□□ 0.92
SRSF5-205ENST00000553635 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
SRSF5-205ENST00000553635 OSCARQ8IYS5 282 aa20.8■□□□□ 0.92
SRSF5-205ENST00000553635 FBLN2P98095 1184 aa20.79■□□□□ 0.92
SRSF5-205ENST00000553635 BAZ1BQ9UIG0 1483 aaKnown RBP20.77■□□□□ 0.92
SRSF5-205ENST00000553635 POTEHQ6S545 545 aa20.69■□□□□ 0.9
SRSF5-205ENST00000553635 AKT1S1Q96B36 256 aa20.69■□□□□ 0.9
SRSF5-205ENST00000553635 WIZO95785 1651 aa20.62■□□□□ 0.89
SRSF5-205ENST00000553635 NESP48681 1621 aa20.58■□□□□ 0.88
SRSF5-205ENST00000553635 RSF1Q96T23 1441 aaPredicted RBP20.57■□□□□ 0.88
SRSF5-205ENST00000553635 MKRN4PQ13434 485 aaPredicted RBP20.54■□□□□ 0.88
SRSF5-205ENST00000553635 CHRDL2Q6WN34 429 aa20.51■□□□□ 0.87
SRSF5-205ENST00000553635 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
SRSF5-205ENST00000553635 SPDYE2BA6NHP3 402 aa20.49■□□□□ 0.87
SRSF5-205ENST00000553635 SPDYE6P0CI01 402 aa20.49■□□□□ 0.87
SRSF5-205ENST00000553635 SPDYE2Q495Y8 402 aa20.49■□□□□ 0.87
SRSF5-205ENST00000553635 REM2Q8IYK8 340 aaPredicted RBP20.48■□□□□ 0.87
SRSF5-205ENST00000553635 LAMC3Q9Y6N6 1575 aa20.43■□□□□ 0.86
SRSF5-205ENST00000553635 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
SRSF5-205ENST00000553635 CADPSQ9ULU8 1353 aa20.37■□□□□ 0.85
SRSF5-205ENST00000553635 CUX2O14529 1486 aa20.35■□□□□ 0.85
SRSF5-205ENST00000553635 ZNF692Q9BU19 519 aaPredicted RBP20.35■□□□□ 0.85
SRSF5-205ENST00000553635 PDS5BQ9NTI5 1447 aa20.31■□□□□ 0.84
SRSF5-205ENST00000553635 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
SRSF5-205ENST00000553635 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
SRSF5-205ENST00000553635 PITPNM1O00562 1244 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms