RNA–Protein interactions for RNA: ENST00000450764.6

TNPO2-203, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 4,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-203ENST00000450764 DCAF8L2P0C7V8 631 aa32.22■■■□□ 2.75
TNPO2-203ENST00000450764 NISCHQ9Y2I1 1504 aa32■■■□□ 2.71
TNPO2-203ENST00000450764 SUPT5HO00267 1087 aaKnown RBP30.69■■■□□ 2.5
TNPO2-203ENST00000450764 SHROOM4Q9ULL8 1493 aa30.25■■■□□ 2.43
TNPO2-203ENST00000450764 EHMT2Q96KQ7 1210 aa29.23■■■□□ 2.27
TNPO2-203ENST00000450764 APLP2Q06481 763 aa29.07■■■□□ 2.24
TNPO2-203ENST00000450764 FAM9AQ8IZU1 332 aaPredicted RBP28.82■■■□□ 2.2
TNPO2-203ENST00000450764 TRIM41Q8WV44 630 aa28.61■■■□□ 2.17
TNPO2-203ENST00000450764 PELP1Q8IZL8 1130 aaKnown RBP28.51■■■□□ 2.15
TNPO2-203ENST00000450764 PCGF6Q9BYE7 350 aa28.47■■■□□ 2.15
TNPO2-203ENST00000450764 TTBK1Q5TCY1 1321 aaPredicted RBP28.26■■■□□ 2.12
TNPO2-203ENST00000450764 ZEB1P37275 1124 aaPredicted RBP28.24■■■□□ 2.11
TNPO2-203ENST00000450764 UBTFP17480 764 aaKnown RBP28.14■■■□□ 2.09
TNPO2-203ENST00000450764 RANGAP1P46060 587 aaPredicted RBP28.11■■■□□ 2.09
TNPO2-203ENST00000450764 CCER1Q8TC90 406 aaPredicted RBP28■■■□□ 2.07
TNPO2-203ENST00000450764 ATP1B4Q9UN42 357 aaPredicted RBP27.92■■■□□ 2.06
TNPO2-203ENST00000450764 CENPBP07199 599 aaPredicted RBP27.79■■■□□ 2.04
TNPO2-203ENST00000450764 TRIM26Q12899 539 aaPredicted RBP27.58■■■□□ 2.01
TNPO2-203ENST00000450764 CHIC1Q5VXU3 224 aa27.58■■■□□ 2.01
TNPO2-203ENST00000450764 PPARGC1BQ86YN6 1023 aaKnown RBP27.38■■□□□ 1.97
TNPO2-203ENST00000450764 LOC105371045A0A1W2PR82 267 aa27.3■■□□□ 1.96
TNPO2-203ENST00000450764 ABCC9O60706 1549 aa27.25■■□□□ 1.95
TNPO2-203ENST00000450764 HRCP23327 699 aa27.15■■□□□ 1.94
TNPO2-203ENST00000450764 NEFLP07196 543 aa27.15■■□□□ 1.94
TNPO2-203ENST00000450764 ERICH6Q7L0X2 663 aa27.07■■□□□ 1.92
TNPO2-203ENST00000450764 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.05■■□□□ 1.92
TNPO2-203ENST00000450764 HNRNPUL2Q1KMD3 747 aaKnown RBP27.05■■□□□ 1.92
TNPO2-203ENST00000450764 ITGAEP38570 1179 aa27.02■■□□□ 1.92
TNPO2-203ENST00000450764 YTHDC1Q96MU7 727 aaKnown RBP27■■□□□ 1.91
TNPO2-203ENST00000450764 PABPN1Q86U42 306 aaKnown RBP eCLIP26.98■■□□□ 1.918e-7■■□□□ 14.5
TNPO2-203ENST00000450764 MYT1LQ9UL68 1186 aa26.79■■□□□ 1.88
TNPO2-203ENST00000450764 POLR3GLQ9BT43 218 aa26.57■■□□□ 1.84
TNPO2-203ENST00000450764 ZCCHC6Q5VYS8 1495 aaKnown RBP26.52■■□□□ 1.84
TNPO2-203ENST00000450764 FAM50AQ14320 339 aaKnown RBP26.51■■□□□ 1.83
TNPO2-203ENST00000450764 DIEXFQ68CQ4 756 aaKnown RBP26.38■■□□□ 1.81
TNPO2-203ENST00000450764 CSRNP3Q8WYN3 585 aa26.38■■□□□ 1.81
TNPO2-203ENST00000450764 MYT1Q01538 1121 aa26.35■■□□□ 1.81
TNPO2-203ENST00000450764 CCDC180Q9P1Z9 1646 aa26.31■■□□□ 1.8
TNPO2-203ENST00000450764 TRIM52Q96A61 297 aa26.3■■□□□ 1.8
TNPO2-203ENST00000450764 SCRIBQ14160 1630 aa26.29■■□□□ 1.8
TNPO2-203ENST00000450764 CNGB1Q14028 1251 aaPredicted RBP26.17■■□□□ 1.78
TNPO2-203ENST00000450764 DAXXQ9UER7 740 aaPredicted RBP26.16■■□□□ 1.78
TNPO2-203ENST00000450764 NEUROD1Q13562 356 aa26.14■■□□□ 1.78
TNPO2-203ENST00000450764 FBLN2P98095 1184 aa26.11■■□□□ 1.77
TNPO2-203ENST00000450764 SLC4A1APQ9BWU0 796 aaKnown RBP26.05■■□□□ 1.76
TNPO2-203ENST00000450764 P3H3Q8IVL6 736 aa25.96■■□□□ 1.75
TNPO2-203ENST00000450764 ZNF316A6NFI3 1004 aaPredicted RBP25.94■■□□□ 1.74
TNPO2-203ENST00000450764 ANP32CO43423 234 aa25.94■■□□□ 1.74
TNPO2-203ENST00000450764 CDK11AQ9UQ88 783 aaPredicted RBP25.92■■□□□ 1.74
TNPO2-203ENST00000450764 ZNF326Q5BKZ1 582 aaKnown RBP25.86■■□□□ 1.73
TNPO2-203ENST00000450764 DCAF1Q9Y4B6 1507 aa25.84■■□□□ 1.73
TNPO2-203ENST00000450764 RB1CC1Q8TDY2 1594 aa25.77■■□□□ 1.72
TNPO2-203ENST00000450764 ARID3CA6NKF2 412 aa25.72■■□□□ 1.71
TNPO2-203ENST00000450764 CLSPNQ9HAW4 1339 aa25.71■■□□□ 1.71
TNPO2-203ENST00000450764 ZNF777Q9ULD5 760 aaPredicted RBP25.67■■□□□ 1.7
TNPO2-203ENST00000450764 NACADO15069 1562 aa25.62■■□□□ 1.69
TNPO2-203ENST00000450764 RSF1Q96T23 1441 aaPredicted RBP25.61■■□□□ 1.69
TNPO2-203ENST00000450764 GTF3C3Q9Y5Q9 886 aa25.6■■□□□ 1.69
TNPO2-203ENST00000450764 EEA1Q15075 1411 aa25.54■■□□□ 1.68
TNPO2-203ENST00000450764 RTL5Q5HYW3 569 aaPredicted RBP25.53■■□□□ 1.68
TNPO2-203ENST00000450764 TONSLQ96HA7 1378 aa25.52■■□□□ 1.68
TNPO2-203ENST00000450764 BCANQ96GW7 911 aa25.45■■□□□ 1.66
TNPO2-203ENST00000450764 CLIP1P30622 1438 aa25.44■■□□□ 1.66
TNPO2-203ENST00000450764 ACIN1Q9UKV3 1341 aaKnown RBP25.41■■□□□ 1.66
TNPO2-203ENST00000450764 NEFMP07197 916 aa25.4■■□□□ 1.66
TNPO2-203ENST00000450764 NPM1P06748 294 aaKnown RBP eCLIP25.37■■□□□ 1.65
TNPO2-203ENST00000450764 ZBTB47Q9UFB7 747 aaPredicted RBP25.36■■□□□ 1.65
TNPO2-203ENST00000450764 MTUS2Q5JR59 1369 aa25.36■■□□□ 1.65
TNPO2-203ENST00000450764 GOLGA3Q08378 1498 aa25.33■■□□□ 1.65
TNPO2-203ENST00000450764 WRNQ14191 1432 aaPredicted RBP eCLIP25.32■■□□□ 1.64
TNPO2-203ENST00000450764 BAZ1BQ9UIG0 1483 aaKnown RBP25.3■■□□□ 1.64
TNPO2-203ENST00000450764 CANXP27824 592 aaKnown RBP25.3■■□□□ 1.64
TNPO2-203ENST00000450764 CHMP7Q8WUX9 453 aaPredicted RBP25.28■■□□□ 1.64
TNPO2-203ENST00000450764 TSPY4P0CV99 314 aa25.27■■□□□ 1.64
TNPO2-203ENST00000450764 TSPY10P0CW01 314 aa25.27■■□□□ 1.64
TNPO2-203ENST00000450764 ESF1Q9H501 851 aaKnown RBP25.27■■□□□ 1.64
TNPO2-203ENST00000450764 CHIC2Q9UKJ5 165 aa25.25■■□□□ 1.63
TNPO2-203ENST00000450764 CEP162Q5TB80 1403 aa25.22■■□□□ 1.63
TNPO2-203ENST00000450764 BAZ1AQ9NRL2 1556 aaPredicted RBP25.21■■□□□ 1.63
TNPO2-203ENST00000450764 KIF27Q86VH2 1401 aa25.18■■□□□ 1.62
TNPO2-203ENST00000450764 DDX10Q13206 875 aaKnown RBP25.18■■□□□ 1.62
TNPO2-203ENST00000450764 TNIKQ9UKE5 1360 aa25.16■■□□□ 1.62
TNPO2-203ENST00000450764 CHGAP10645 457 aaKnown RBP25.16■■□□□ 1.62
TNPO2-203ENST00000450764 MYO15BQ96JP2 1530 aa25.14■■□□□ 1.61
TNPO2-203ENST00000450764 STAG3Q9UJ98 1225 aa25.13■■□□□ 1.61
TNPO2-203ENST00000450764 CEP164Q9UPV0 1460 aa25.12■■□□□ 1.61
TNPO2-203ENST00000450764 HNRNPUQ00839 825 aaKnown RBP eCLIP25.07■■□□□ 1.6
TNPO2-203ENST00000450764 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.07■■□□□ 1.68e-8■■□□□ 13.2
TNPO2-203ENST00000450764 SLC24A1O60721 1099 aa25.05■■□□□ 1.6
TNPO2-203ENST00000450764 PLEKHD1A6NEE1 506 aa25.02■■□□□ 1.6
TNPO2-203ENST00000450764 ANP32AP39687 249 aaKnown RBP24.99■■□□□ 1.59
TNPO2-203ENST00000450764 FAM9BQ8IZU0 186 aa24.99■■□□□ 1.59
TNPO2-203ENST00000450764 CECR2Q9BXF3 1484 aa24.98■■□□□ 1.59
TNPO2-203ENST00000450764 TMC1Q8TDI8 760 aa24.98■■□□□ 1.59
TNPO2-203ENST00000450764 FKBP8Q14318 412 aa24.97■■□□□ 1.59
TNPO2-203ENST00000450764 EIF4G2P78344 907 aaKnown RBP eCLIP24.94■■□□□ 1.58
TNPO2-203ENST00000450764 RRP7BPQ9NSQ0 103 aa24.94■■□□□ 1.58
TNPO2-203ENST00000450764 KDM2AQ9Y2K7 1162 aa24.91■■□□□ 1.58
TNPO2-203ENST00000450764 MRS2Q9HD23 443 aa24.87■■□□□ 1.57
TNPO2-203ENST00000450764 CFDP1Q9UEE9 299 aaPredicted RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms