RNA–Protein interactions for RNA: ENST00000556587.5

SRSF5-215, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 1,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-215ENST00000556587 NISCHQ9Y2I1 1504 aa29.21■■■□□ 2.27
SRSF5-215ENST00000556587 CCDC180Q9P1Z9 1646 aa26.26■■□□□ 1.79
SRSF5-215ENST00000556587 ABCC9O60706 1549 aa26.18■■□□□ 1.78
SRSF5-215ENST00000556587 RB1CC1Q8TDY2 1594 aa24.95■■□□□ 1.58
SRSF5-215ENST00000556587 NACADO15069 1562 aa24.79■■□□□ 1.56
SRSF5-215ENST00000556587 DNAJC5BQ9UF47 199 aa24.59■■□□□ 1.53
SRSF5-215ENST00000556587 DCAF8L2P0C7V8 631 aa24.5■■□□□ 1.51
SRSF5-215ENST00000556587 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
SRSF5-215ENST00000556587 UNC13AQ9UPW8 1703 aa24.48■■□□□ 1.51
SRSF5-215ENST00000556587 PABPN1Q86U42 306 aaKnown RBP eCLIP24.34■■□□□ 1.495e-9■■■■□ 23.4
SRSF5-215ENST00000556587 BICRAQ9NZM4 1560 aa24.28■■□□□ 1.48
SRSF5-215ENST00000556587 ZCCHC6Q5VYS8 1495 aaKnown RBP24.23■■□□□ 1.47
SRSF5-215ENST00000556587 DCAF1Q9Y4B6 1507 aa24.16■■□□□ 1.46
SRSF5-215ENST00000556587 SHROOM4Q9ULL8 1493 aa23.92■■□□□ 1.42
SRSF5-215ENST00000556587 SCRIBQ14160 1630 aa23.88■■□□□ 1.41
SRSF5-215ENST00000556587 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.38
SRSF5-215ENST00000556587 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
SRSF5-215ENST00000556587 CECR2Q9BXF3 1484 aa23.59■■□□□ 1.37
SRSF5-215ENST00000556587 NCAPD3P42695 1498 aa22.88■■□□□ 1.25
SRSF5-215ENST00000556587 SMARCA4P51532 1647 aa22.81■■□□□ 1.24
SRSF5-215ENST00000556587 ATAD2BQ9ULI0 1458 aa22.81■■□□□ 1.24
SRSF5-215ENST00000556587 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
SRSF5-215ENST00000556587 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
SRSF5-215ENST00000556587 BAZ1AQ9NRL2 1556 aaPredicted RBP22.67■■□□□ 1.22
SRSF5-215ENST00000556587 PEG3Q9GZU2 1588 aa22.61■■□□□ 1.21
SRSF5-215ENST00000556587 CUX2O14529 1486 aa22.59■■□□□ 1.21
SRSF5-215ENST00000556587 ERCC6Q03468 1493 aa22.58■■□□□ 1.2
SRSF5-215ENST00000556587 BAZ1BQ9UIG0 1483 aaKnown RBP22.57■■□□□ 1.2
SRSF5-215ENST00000556587 DNAJC5Q9H3Z4 198 aa22.56■■□□□ 1.2
SRSF5-215ENST00000556587 NESP48681 1621 aa22.52■■□□□ 1.2
SRSF5-215ENST00000556587 MROH2BQ7Z745 1585 aa22.51■■□□□ 1.19
SRSF5-215ENST00000556587 LAMC3Q9Y6N6 1575 aa22.37■■□□□ 1.17
SRSF5-215ENST00000556587 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
SRSF5-215ENST00000556587 KIF21AQ7Z4S6 1674 aa22.27■■□□□ 1.16
SRSF5-215ENST00000556587 WIZO95785 1651 aa22.25■■□□□ 1.15
SRSF5-215ENST00000556587 PDS5BQ9NTI5 1447 aa22.19■■□□□ 1.14
SRSF5-215ENST00000556587 CADPSQ9ULU8 1353 aa22.15■■□□□ 1.14
SRSF5-215ENST00000556587 RSF1Q96T23 1441 aaPredicted RBP22.03■■□□□ 1.12
SRSF5-215ENST00000556587 MRC2Q9UBG0 1479 aa22.02■■□□□ 1.12
SRSF5-215ENST00000556587 WDR62O43379 1518 aa22.02■■□□□ 1.12
SRSF5-215ENST00000556587 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
SRSF5-215ENST00000556587 CFTRP13569 1480 aa21.94■■□□□ 1.1
SRSF5-215ENST00000556587 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
SRSF5-215ENST00000556587 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
SRSF5-215ENST00000556587 SUPT5HO00267 1087 aaKnown RBP21.86■■□□□ 1.09
SRSF5-215ENST00000556587 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
SRSF5-215ENST00000556587 URB2Q14146 1524 aaKnown RBP21.76■■□□□ 1.07
SRSF5-215ENST00000556587 CCDC88BA6NC98 1476 aa21.69■■□□□ 1.06
SRSF5-215ENST00000556587 TOPBP1Q92547 1522 aa21.51■■□□□ 1.03
SRSF5-215ENST00000556587 ZNF608Q9ULD9 1512 aaPredicted RBP21.49■■□□□ 1.03
SRSF5-215ENST00000556587 IFT140Q96RY7 1462 aa21.49■■□□□ 1.03
SRSF5-215ENST00000556587 OSCARQ8IYS5 282 aa21.49■■□□□ 1.03
SRSF5-215ENST00000556587 TRIM41Q8WV44 630 aa21.49■■□□□ 1.03
SRSF5-215ENST00000556587 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
SRSF5-215ENST00000556587 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
SRSF5-215ENST00000556587 EIF4G3O43432 1585 aaKnown RBP21.39■■□□□ 1.01
SRSF5-215ENST00000556587 TARBP1Q13395 1621 aaKnown RBP21.36■■□□□ 1.01
SRSF5-215ENST00000556587 RIMBP3CA6NJZ7 1639 aa21.3■■□□□ 1
SRSF5-215ENST00000556587 RIMBP3BA6NNM3 1639 aa21.3■■□□□ 1
SRSF5-215ENST00000556587 RIMBP3Q9UFD9 1639 aa21.3■■□□□ 1
SRSF5-215ENST00000556587 POLA1P09884 1462 aaPredicted RBP21.3■■□□□ 1
SRSF5-215ENST00000556587 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.993e-8■■■■□ 24.7
SRSF5-215ENST00000556587 CHIC1Q5VXU3 224 aa21.25■□□□□ 0.99
SRSF5-215ENST00000556587 CHD1O14646 1710 aa21.24■□□□□ 0.99
SRSF5-215ENST00000556587 ARHGEF11O15085 1522 aa21.22■□□□□ 0.99
SRSF5-215ENST00000556587 RAD54L2Q9Y4B4 1467 aa21.2■□□□□ 0.98
SRSF5-215ENST00000556587 CUX1P39880 1505 aa21.15■□□□□ 0.98
SRSF5-215ENST00000556587 FGD5Q6ZNL6 1462 aa21.15■□□□□ 0.98
SRSF5-215ENST00000556587 SOGA1O94964 1423 aa21.14■□□□□ 0.98
SRSF5-215ENST00000556587 WDR97A6NE52 1622 aa21.13■□□□□ 0.97
SRSF5-215ENST00000556587 TDRD9Q8NDG6 1382 aaKnown RBP21.11■□□□□ 0.97
SRSF5-215ENST00000556587 SNAPC4Q5SXM2 1469 aa21.05■□□□□ 0.96
SRSF5-215ENST00000556587 FBLN2P98095 1184 aa21.03■□□□□ 0.96
SRSF5-215ENST00000556587 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
SRSF5-215ENST00000556587 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
SRSF5-215ENST00000556587 CLASP1Q7Z460 1538 aa21■□□□□ 0.95
SRSF5-215ENST00000556587 CYB5RLQ6IPT4 315 aa20.98■□□□□ 0.95
SRSF5-215ENST00000556587 GRIN2BQ13224 1484 aa20.98■□□□□ 0.95
SRSF5-215ENST00000556587 PBRM1Q86U86 1689 aa20.96■□□□□ 0.95
SRSF5-215ENST00000556587 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
SRSF5-215ENST00000556587 SYNJ2O15056 1496 aa20.93■□□□□ 0.94
SRSF5-215ENST00000556587 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
SRSF5-215ENST00000556587 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
SRSF5-215ENST00000556587 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
SRSF5-215ENST00000556587 CHMP7Q8WUX9 453 aaPredicted RBP20.9■□□□□ 0.94
SRSF5-215ENST00000556587 BIVM-ERCC5R4GMW8 1640 aa20.84■□□□□ 0.93
SRSF5-215ENST00000556587 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
SRSF5-215ENST00000556587 WRNQ14191 1432 aaPredicted RBP eCLIP20.8■□□□□ 0.92
SRSF5-215ENST00000556587 ADAMTS12P58397 1594 aa20.75■□□□□ 0.91
SRSF5-215ENST00000556587 GRIN2AQ12879 1464 aa20.74■□□□□ 0.91
SRSF5-215ENST00000556587 TRHP20396 242 aaPredicted RBP20.71■□□□□ 0.91
SRSF5-215ENST00000556587 CEP170Q5SW79 1584 aa20.69■□□□□ 0.9
SRSF5-215ENST00000556587 NUP160Q12769 1436 aa20.69■□□□□ 0.9
SRSF5-215ENST00000556587 ERCC6L2Q5T890 1561 aa20.66■□□□□ 0.9
SRSF5-215ENST00000556587 ERICH3Q5RHP9 1530 aa20.66■□□□□ 0.9
SRSF5-215ENST00000556587 FHAD1B1AJZ9 1412 aa20.64■□□□□ 0.9
SRSF5-215ENST00000556587 SHROOM2Q13796 1616 aa20.63■□□□□ 0.89
SRSF5-215ENST00000556587 RUSC2Q8N2Y8 1516 aa20.48■□□□□ 0.87
SRSF5-215ENST00000556587 PRG4Q92954 1404 aaPredicted RBP20.43■□□□□ 0.86
SRSF5-215ENST00000556587 LOC105371045A0A1W2PR82 267 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms