RNA–Protein interactions for RNA: ENST00000356861.9

TNPO2-201, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 4,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-201ENST00000356861 DCAF8L2P0C7V8 631 aa31.47■■■□□ 2.63
TNPO2-201ENST00000356861 NISCHQ9Y2I1 1504 aa31.35■■■□□ 2.61
TNPO2-201ENST00000356861 SUPT5HO00267 1087 aaKnown RBP30.24■■■□□ 2.43
TNPO2-201ENST00000356861 SHROOM4Q9ULL8 1493 aa29.83■■■□□ 2.37
TNPO2-201ENST00000356861 EHMT2Q96KQ7 1210 aa28.88■■■□□ 2.21
TNPO2-201ENST00000356861 FAM9AQ8IZU1 332 aaPredicted RBP28.41■■■□□ 2.14
TNPO2-201ENST00000356861 APLP2Q06481 763 aa28.34■■■□□ 2.13
TNPO2-201ENST00000356861 PCGF6Q9BYE7 350 aa28.27■■■□□ 2.12
TNPO2-201ENST00000356861 TRIM41Q8WV44 630 aa28.07■■■□□ 2.08
TNPO2-201ENST00000356861 TTBK1Q5TCY1 1321 aaPredicted RBP27.93■■■□□ 2.06
TNPO2-201ENST00000356861 PELP1Q8IZL8 1130 aaKnown RBP27.9■■■□□ 2.06
TNPO2-201ENST00000356861 ZEB1P37275 1124 aaPredicted RBP27.76■■■□□ 2.03
TNPO2-201ENST00000356861 RANGAP1P46060 587 aaPredicted RBP27.63■■■□□ 2.01
TNPO2-201ENST00000356861 CCER1Q8TC90 406 aaPredicted RBP27.6■■■□□ 2.01
TNPO2-201ENST00000356861 UBTFP17480 764 aaKnown RBP27.57■■■□□ 2
TNPO2-201ENST00000356861 CENPBP07199 599 aaPredicted RBP27.4■■□□□ 1.98
TNPO2-201ENST00000356861 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
TNPO2-201ENST00000356861 ATP1B4Q9UN42 357 aaPredicted RBP27.29■■□□□ 1.96
TNPO2-201ENST00000356861 TRIM26Q12899 539 aaPredicted RBP27.24■■□□□ 1.95
TNPO2-201ENST00000356861 PPARGC1BQ86YN6 1023 aaKnown RBP27.15■■□□□ 1.94
TNPO2-201ENST00000356861 LOC105371045A0A1W2PR82 267 aa27.09■■□□□ 1.93
TNPO2-201ENST00000356861 HRCP23327 699 aa27.04■■□□□ 1.92
TNPO2-201ENST00000356861 YTHDC1Q96MU7 727 aaKnown RBP26.79■■□□□ 1.88
TNPO2-201ENST00000356861 NEFLP07196 543 aa26.65■■□□□ 1.86
TNPO2-201ENST00000356861 ERICH6Q7L0X2 663 aa26.62■■□□□ 1.85
TNPO2-201ENST00000356861 ITGAEP38570 1179 aa26.58■■□□□ 1.84
TNPO2-201ENST00000356861 HNRNPUL2Q1KMD3 747 aaKnown RBP26.56■■□□□ 1.84
TNPO2-201ENST00000356861 ABCC9O60706 1549 aa26.55■■□□□ 1.84
TNPO2-201ENST00000356861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.35■■□□□ 1.81
TNPO2-201ENST00000356861 PABPN1Q86U42 306 aaKnown RBP eCLIP26.35■■□□□ 1.818e-7■■□□□ 14.5
TNPO2-201ENST00000356861 DIEXFQ68CQ4 756 aaKnown RBP26.13■■□□□ 1.77
TNPO2-201ENST00000356861 POLR3GLQ9BT43 218 aa26.07■■□□□ 1.76
TNPO2-201ENST00000356861 MYT1Q01538 1121 aa26.07■■□□□ 1.76
TNPO2-201ENST00000356861 ZCCHC6Q5VYS8 1495 aaKnown RBP26.02■■□□□ 1.76
TNPO2-201ENST00000356861 MYT1LQ9UL68 1186 aa26■■□□□ 1.75
TNPO2-201ENST00000356861 FAM50AQ14320 339 aaKnown RBP25.98■■□□□ 1.75
TNPO2-201ENST00000356861 CSRNP3Q8WYN3 585 aa25.87■■□□□ 1.73
TNPO2-201ENST00000356861 CNGB1Q14028 1251 aaPredicted RBP25.82■■□□□ 1.72
TNPO2-201ENST00000356861 TRIM52Q96A61 297 aa25.74■■□□□ 1.71
TNPO2-201ENST00000356861 NEUROD1Q13562 356 aa25.73■■□□□ 1.71
TNPO2-201ENST00000356861 SCRIBQ14160 1630 aa25.7■■□□□ 1.7
TNPO2-201ENST00000356861 ZNF316A6NFI3 1004 aaPredicted RBP25.63■■□□□ 1.69
TNPO2-201ENST00000356861 CCDC180Q9P1Z9 1646 aa25.62■■□□□ 1.69
TNPO2-201ENST00000356861 DAXXQ9UER7 740 aaPredicted RBP25.62■■□□□ 1.69
TNPO2-201ENST00000356861 DCAF1Q9Y4B6 1507 aa25.57■■□□□ 1.68
TNPO2-201ENST00000356861 GTF3C3Q9Y5Q9 886 aa25.51■■□□□ 1.67
TNPO2-201ENST00000356861 P3H3Q8IVL6 736 aa25.48■■□□□ 1.67
TNPO2-201ENST00000356861 ANP32CO43423 234 aa25.48■■□□□ 1.67
TNPO2-201ENST00000356861 SLC4A1APQ9BWU0 796 aaKnown RBP25.43■■□□□ 1.66
TNPO2-201ENST00000356861 FBLN2P98095 1184 aa25.41■■□□□ 1.66
TNPO2-201ENST00000356861 ZNF326Q5BKZ1 582 aaKnown RBP25.37■■□□□ 1.65
TNPO2-201ENST00000356861 ACIN1Q9UKV3 1341 aaKnown RBP25.29■■□□□ 1.64
TNPO2-201ENST00000356861 BCANQ96GW7 911 aa25.28■■□□□ 1.64
TNPO2-201ENST00000356861 ARID3CA6NKF2 412 aa25.25■■□□□ 1.63
TNPO2-201ENST00000356861 CLSPNQ9HAW4 1339 aa25.21■■□□□ 1.63
TNPO2-201ENST00000356861 RSF1Q96T23 1441 aaPredicted RBP25.18■■□□□ 1.62
TNPO2-201ENST00000356861 CDK11AQ9UQ88 783 aaPredicted RBP25.16■■□□□ 1.62
TNPO2-201ENST00000356861 RTL5Q5HYW3 569 aaPredicted RBP25.14■■□□□ 1.61
TNPO2-201ENST00000356861 MYO15BQ96JP2 1530 aa25.11■■□□□ 1.61
TNPO2-201ENST00000356861 ZNF777Q9ULD5 760 aaPredicted RBP25.08■■□□□ 1.61
TNPO2-201ENST00000356861 TONSLQ96HA7 1378 aa25.04■■□□□ 1.6
TNPO2-201ENST00000356861 RB1CC1Q8TDY2 1594 aa25■■□□□ 1.59
TNPO2-201ENST00000356861 CLIP1P30622 1438 aa24.99■■□□□ 1.59
TNPO2-201ENST00000356861 EEA1Q15075 1411 aa24.96■■□□□ 1.59
TNPO2-201ENST00000356861 NACADO15069 1562 aa24.89■■□□□ 1.58
TNPO2-201ENST00000356861 DDX10Q13206 875 aaKnown RBP24.88■■□□□ 1.57
TNPO2-201ENST00000356861 CEP162Q5TB80 1403 aa24.86■■□□□ 1.57
TNPO2-201ENST00000356861 GOLGA3Q08378 1498 aa24.84■■□□□ 1.57
TNPO2-201ENST00000356861 WRNQ14191 1432 aaPredicted RBP eCLIP24.8■■□□□ 1.56
TNPO2-201ENST00000356861 CHIC2Q9UKJ5 165 aa24.8■■□□□ 1.56
TNPO2-201ENST00000356861 MTUS2Q5JR59 1369 aa24.8■■□□□ 1.56
TNPO2-201ENST00000356861 CANXP27824 592 aaKnown RBP24.75■■□□□ 1.55
TNPO2-201ENST00000356861 HNRNPUQ00839 825 aaKnown RBP eCLIP24.75■■□□□ 1.55
TNPO2-201ENST00000356861 FKBP8Q14318 412 aa24.75■■□□□ 1.55
TNPO2-201ENST00000356861 TNIKQ9UKE5 1360 aa24.71■■□□□ 1.55
TNPO2-201ENST00000356861 ZBTB47Q9UFB7 747 aaPredicted RBP24.69■■□□□ 1.54
TNPO2-201ENST00000356861 NEFMP07197 916 aa24.68■■□□□ 1.54
TNPO2-201ENST00000356861 BAZ1BQ9UIG0 1483 aaKnown RBP24.67■■□□□ 1.54
TNPO2-201ENST00000356861 MIER1Q8N108 512 aa24.66■■□□□ 1.54
TNPO2-201ENST00000356861 FAM9BQ8IZU0 186 aa24.65■■□□□ 1.54
TNPO2-201ENST00000356861 BAZ1AQ9NRL2 1556 aaPredicted RBP24.62■■□□□ 1.53
TNPO2-201ENST00000356861 CEP164Q9UPV0 1460 aa24.62■■□□□ 1.53
TNPO2-201ENST00000356861 TSPY4P0CV99 314 aa24.62■■□□□ 1.53
TNPO2-201ENST00000356861 TSPY10P0CW01 314 aa24.62■■□□□ 1.53
TNPO2-201ENST00000356861 ANP32AP39687 249 aaKnown RBP24.61■■□□□ 1.53
TNPO2-201ENST00000356861 CECR2Q9BXF3 1484 aa24.59■■□□□ 1.53
TNPO2-201ENST00000356861 KIF27Q86VH2 1401 aa24.58■■□□□ 1.53
TNPO2-201ENST00000356861 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
TNPO2-201ENST00000356861 CHGAP10645 457 aaKnown RBP24.54■■□□□ 1.52
TNPO2-201ENST00000356861 TMC1Q8TDI8 760 aa24.52■■□□□ 1.52
TNPO2-201ENST00000356861 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.52■■□□□ 1.528e-8■■□□□ 13.2
TNPO2-201ENST00000356861 SCAF1Q9H7N4 1312 aaKnown RBP24.51■■□□□ 1.51
TNPO2-201ENST00000356861 RRP7BPQ9NSQ0 103 aa24.5■■□□□ 1.51
TNPO2-201ENST00000356861 HIRIP3Q9BW71 556 aaPredicted RBP24.5■■□□□ 1.51
TNPO2-201ENST00000356861 NPM1P06748 294 aaKnown RBP eCLIP24.5■■□□□ 1.51
TNPO2-201ENST00000356861 MRS2Q9HD23 443 aa24.49■■□□□ 1.51
TNPO2-201ENST00000356861 EIF4G2P78344 907 aaKnown RBP eCLIP24.47■■□□□ 1.51
TNPO2-201ENST00000356861 KDM2AQ9Y2K7 1162 aa24.45■■□□□ 1.5
TNPO2-201ENST00000356861 SLC24A1O60721 1099 aa24.43■■□□□ 1.5
TNPO2-201ENST00000356861 NPM2Q86SE8 214 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms