RNA–Protein interactions for RNA: ENST00000461830.6

RFWD2-206, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 5

Gene RFWD2, Length 2,131 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-206ENST00000461830 NISCHQ9Y2I1 1504 aa17.39■□□□□ 0.37
RFWD2-206ENST00000461830 CCDC180Q9P1Z9 1646 aa15.44■□□□□ 0.06
RFWD2-206ENST00000461830 ABCC9O60706 1549 aa15.03■□□□□ -0
RFWD2-206ENST00000461830 AEBP2Q6ZN18 517 aaPredicted RBP14.56□□□□□ -0.08
RFWD2-206ENST00000461830 DCAF8L2P0C7V8 631 aa14.53□□□□□ -0.08
RFWD2-206ENST00000461830 ZCCHC6Q5VYS8 1495 aaKnown RBP14.51□□□□□ -0.09
RFWD2-206ENST00000461830 RB1CC1Q8TDY2 1594 aa14.49□□□□□ -0.09
RFWD2-206ENST00000461830 NACADO15069 1562 aa14.48□□□□□ -0.09
RFWD2-206ENST00000461830 MYO15BQ96JP2 1530 aa14.41□□□□□ -0.1
RFWD2-206ENST00000461830 DCAF1Q9Y4B6 1507 aa14.38□□□□□ -0.11
RFWD2-206ENST00000461830 UNC13AQ9UPW8 1703 aa14.14□□□□□ -0.15
RFWD2-206ENST00000461830 SCRIBQ14160 1630 aa14.11□□□□□ -0.15
RFWD2-206ENST00000461830 CHIC1Q5VXU3 224 aa14.1□□□□□ -0.15
RFWD2-206ENST00000461830 PABPN1Q86U42 306 aaKnown RBP eCLIP14.05□□□□□ -0.16
RFWD2-206ENST00000461830 BICRAQ9NZM4 1560 aa14.02□□□□□ -0.16
RFWD2-206ENST00000461830 SHROOM4Q9ULL8 1493 aa13.9□□□□□ -0.18
RFWD2-206ENST00000461830 DNAJC5BQ9UF47 199 aa13.67□□□□□ -0.22
RFWD2-206ENST00000461830 EIF4G1Q04637 1599 aaKnown RBP13.67□□□□□ -0.22
RFWD2-206ENST00000461830 CC2D2AQ9P2K1 1620 aa13.59□□□□□ -0.23
RFWD2-206ENST00000461830 CECR2Q9BXF3 1484 aa13.53□□□□□ -0.24
RFWD2-206ENST00000461830 BAZ1AQ9NRL2 1556 aaPredicted RBP13.49□□□□□ -0.25
RFWD2-206ENST00000461830 SMARCA4P51532 1647 aa13.49□□□□□ -0.25
RFWD2-206ENST00000461830 MROH2BQ7Z745 1585 aa13.4□□□□□ -0.26
RFWD2-206ENST00000461830 SMARCA2P51531 1590 aa13.38□□□□□ -0.27
RFWD2-206ENST00000461830 ATAD2BQ9ULI0 1458 aa13.38□□□□□ -0.27
RFWD2-206ENST00000461830 NCAPD3P42695 1498 aa13.35□□□□□ -0.27
RFWD2-206ENST00000461830 PEG3Q9GZU2 1588 aa13.33□□□□□ -0.28
RFWD2-206ENST00000461830 HMGXB3Q12766 1538 aa13.31□□□□□ -0.28
RFWD2-206ENST00000461830 BAZ1BQ9UIG0 1483 aaKnown RBP13.3□□□□□ -0.28
RFWD2-206ENST00000461830 WIZO95785 1651 aa13.27□□□□□ -0.28
RFWD2-206ENST00000461830 RSF1Q96T23 1441 aaPredicted RBP13.27□□□□□ -0.29
RFWD2-206ENST00000461830 TOP2AP11388 1531 aaKnown RBP13.14□□□□□ -0.31
RFWD2-206ENST00000461830 SUPT5HO00267 1087 aaKnown RBP13.03□□□□□ -0.32
RFWD2-206ENST00000461830 NESP48681 1621 aa13.02□□□□□ -0.33
RFWD2-206ENST00000461830 LAMC3Q9Y6N6 1575 aa13.01□□□□□ -0.33
RFWD2-206ENST00000461830 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
RFWD2-206ENST00000461830 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
RFWD2-206ENST00000461830 ERCC6Q03468 1493 aa12.97□□□□□ -0.33
RFWD2-206ENST00000461830 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
RFWD2-206ENST00000461830 CFTRP13569 1480 aa12.91□□□□□ -0.34
RFWD2-206ENST00000461830 KIF21AQ7Z4S6 1674 aa12.87□□□□□ -0.35
RFWD2-206ENST00000461830 FANCD2Q9BXW9 1451 aa12.84□□□□□ -0.35
RFWD2-206ENST00000461830 PRDM2Q13029 1718 aa12.83□□□□□ -0.35
RFWD2-206ENST00000461830 CEP164Q9UPV0 1460 aa12.83□□□□□ -0.36
RFWD2-206ENST00000461830 THOC2Q8NI27 1593 aaKnown RBP12.81□□□□□ -0.36
RFWD2-206ENST00000461830 MRC2Q9UBG0 1479 aa12.78□□□□□ -0.36
RFWD2-206ENST00000461830 CUX2O14529 1486 aa12.77□□□□□ -0.36
RFWD2-206ENST00000461830 WDR62O43379 1518 aa12.73□□□□□ -0.37
RFWD2-206ENST00000461830 URB2Q14146 1524 aaKnown RBP12.69□□□□□ -0.38
RFWD2-206ENST00000461830 ABCC8Q09428 1581 aa12.64□□□□□ -0.39
RFWD2-206ENST00000461830 DNMBPQ6XZF7 1577 aa12.64□□□□□ -0.39
RFWD2-206ENST00000461830 TOPBP1Q92547 1522 aa12.64□□□□□ -0.39
RFWD2-206ENST00000461830 CUX1P39880 1505 aa12.57□□□□□ -0.4
RFWD2-206ENST00000461830 IFT140Q96RY7 1462 aa12.54□□□□□ -0.4
RFWD2-206ENST00000461830 POLA1P09884 1462 aaPredicted RBP12.54□□□□□ -0.4
RFWD2-206ENST00000461830 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
RFWD2-206ENST00000461830 SLC24A1O60721 1099 aa12.53□□□□□ -0.4
RFWD2-206ENST00000461830 FGD5Q6ZNL6 1462 aa12.53□□□□□ -0.4
RFWD2-206ENST00000461830 SYNJ1O43426 1573 aa12.49□□□□□ -0.41
RFWD2-206ENST00000461830 TOP2BQ02880 1626 aa12.49□□□□□ -0.41
RFWD2-206ENST00000461830 BIVM-ERCC5R4GMW8 1640 aa12.49□□□□□ -0.41
RFWD2-206ENST00000461830 SOGA1O94964 1423 aa12.49□□□□□ -0.41
RFWD2-206ENST00000461830 TARBP1Q13395 1621 aaKnown RBP12.48□□□□□ -0.41
RFWD2-206ENST00000461830 RAD54L2Q9Y4B4 1467 aa12.48□□□□□ -0.41
RFWD2-206ENST00000461830 ZNF608Q9ULD9 1512 aaPredicted RBP12.47□□□□□ -0.41
RFWD2-206ENST00000461830 EIF4G3O43432 1585 aaKnown RBP12.44□□□□□ -0.42
RFWD2-206ENST00000461830 PHF23Q9BUL5 403 aaPredicted RBP12.44□□□□□ -0.42
RFWD2-206ENST00000461830 AQRO60306 1485 aaKnown RBP eCLIP12.42□□□□□ -0.421e-7■■■■□ 21.1
RFWD2-206ENST00000461830 WDR97A6NE52 1622 aa12.41□□□□□ -0.42
RFWD2-206ENST00000461830 TDRD9Q8NDG6 1382 aaKnown RBP12.41□□□□□ -0.42
RFWD2-206ENST00000461830 ABCA10Q8WWZ4 1543 aa12.4□□□□□ -0.42
RFWD2-206ENST00000461830 GAPVD1Q14C86 1478 aa12.35□□□□□ -0.43
RFWD2-206ENST00000461830 ABCA5Q8WWZ7 1642 aa12.35□□□□□ -0.43
RFWD2-206ENST00000461830 GRIN2BQ13224 1484 aa12.34□□□□□ -0.43
RFWD2-206ENST00000461830 PBRM1Q86U86 1689 aa12.33□□□□□ -0.44
RFWD2-206ENST00000461830 SNAPC4Q5SXM2 1469 aa12.32□□□□□ -0.44
RFWD2-206ENST00000461830 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
RFWD2-206ENST00000461830 MAGI1Q96QZ7 1491 aaPredicted RBP12.3□□□□□ -0.44
RFWD2-206ENST00000461830 SENP3Q9H4L4 574 aaPredicted RBP12.29□□□□□ -0.44
RFWD2-206ENST00000461830 FBLN2P98095 1184 aa12.27□□□□□ -0.45
RFWD2-206ENST00000461830 KIF27Q86VH2 1401 aa12.27□□□□□ -0.45
RFWD2-206ENST00000461830 CHD1O14646 1710 aa12.27□□□□□ -0.45
RFWD2-206ENST00000461830 ERICH3Q5RHP9 1530 aa12.26□□□□□ -0.45
RFWD2-206ENST00000461830 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
RFWD2-206ENST00000461830 DNAJC5Q9H3Z4 198 aa12.26□□□□□ -0.45
RFWD2-206ENST00000461830 SYNJ2O15056 1496 aa12.25□□□□□ -0.45
RFWD2-206ENST00000461830 CHMP7Q8WUX9 453 aaPredicted RBP12.24□□□□□ -0.45
RFWD2-206ENST00000461830 ADAMTS12P58397 1594 aa12.24□□□□□ -0.45
RFWD2-206ENST00000461830 FHAD1B1AJZ9 1412 aa12.21□□□□□ -0.46
RFWD2-206ENST00000461830 GRIN2AQ12879 1464 aa12.18□□□□□ -0.46
RFWD2-206ENST00000461830 IGF1RP08069 1367 aa12.18□□□□□ -0.46
RFWD2-206ENST00000461830 CUL7Q14999 1698 aa12.18□□□□□ -0.46
RFWD2-206ENST00000461830 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
RFWD2-206ENST00000461830 CARMIL1Q5VZK9 1371 aa12.13□□□□□ -0.47
RFWD2-206ENST00000461830 CLASP1Q7Z460 1538 aa12.12□□□□□ -0.47
RFWD2-206ENST00000461830 CEP170Q5SW79 1584 aa12.11□□□□□ -0.47
RFWD2-206ENST00000461830 NUP160Q12769 1436 aa12.11□□□□□ -0.47
RFWD2-206ENST00000461830 EEA1Q15075 1411 aa12.09□□□□□ -0.47
RFWD2-206ENST00000461830 RAPGEF2Q9Y4G8 1499 aa12.07□□□□□ -0.48
RFWD2-206ENST00000461830 ARHGEF11O15085 1522 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms