RNA–Protein interactions for RNA: ENST00000553521.5

SRSF5-203, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 2,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-203ENST00000553521 NISCHQ9Y2I1 1504 aa33.96■■■■□ 3.03
SRSF5-203ENST00000553521 CCDC180Q9P1Z9 1646 aa29.53■■■□□ 2.32
SRSF5-203ENST00000553521 ZCCHC6Q5VYS8 1495 aaKnown RBP28.56■■■□□ 2.16
SRSF5-203ENST00000553521 DCAF1Q9Y4B6 1507 aa28.13■■■□□ 2.09
SRSF5-203ENST00000553521 DCAF8L2P0C7V8 631 aa27.98■■■□□ 2.07
SRSF5-203ENST00000553521 SHROOM4Q9ULL8 1493 aa27.76■■■□□ 2.03
SRSF5-203ENST00000553521 ABCC9O60706 1549 aa27.75■■■□□ 2.03
SRSF5-203ENST00000553521 MYO15BQ96JP2 1530 aa27.75■■■□□ 2.03
SRSF5-203ENST00000553521 NACADO15069 1562 aa27.5■■□□□ 1.99
SRSF5-203ENST00000553521 RB1CC1Q8TDY2 1594 aa27.2■■□□□ 1.95
SRSF5-203ENST00000553521 SCRIBQ14160 1630 aa27.13■■□□□ 1.93
SRSF5-203ENST00000553521 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
SRSF5-203ENST00000553521 UNC13AQ9UPW8 1703 aa26.58■■□□□ 1.85
SRSF5-203ENST00000553521 RSF1Q96T23 1441 aaPredicted RBP26.41■■□□□ 1.82
SRSF5-203ENST00000553521 BICRAQ9NZM4 1560 aa26.35■■□□□ 1.81
SRSF5-203ENST00000553521 CECR2Q9BXF3 1484 aa26.35■■□□□ 1.81
SRSF5-203ENST00000553521 BAZ1AQ9NRL2 1556 aaPredicted RBP26.22■■□□□ 1.79
SRSF5-203ENST00000553521 MROH2BQ7Z745 1585 aa26.22■■□□□ 1.79
SRSF5-203ENST00000553521 PABPN1Q86U42 306 aaKnown RBP eCLIP26.21■■□□□ 1.795e-9■■■■□ 23.4
SRSF5-203ENST00000553521 SMARCA4P51532 1647 aa26.05■■□□□ 1.76
SRSF5-203ENST00000553521 WIZO95785 1651 aa25.99■■□□□ 1.75
SRSF5-203ENST00000553521 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
SRSF5-203ENST00000553521 TOP2AP11388 1531 aaKnown RBP25.77■■□□□ 1.72
SRSF5-203ENST00000553521 PEG3Q9GZU2 1588 aa25.76■■□□□ 1.71
SRSF5-203ENST00000553521 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
SRSF5-203ENST00000553521 ATAD2BQ9ULI0 1458 aa25.61■■□□□ 1.69
SRSF5-203ENST00000553521 EIF4G1Q04637 1599 aaKnown RBP25.55■■□□□ 1.68
SRSF5-203ENST00000553521 CCDC88BA6NC98 1476 aa25.51■■□□□ 1.67
SRSF5-203ENST00000553521 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
SRSF5-203ENST00000553521 NCAPD3P42695 1498 aa25.39■■□□□ 1.66
SRSF5-203ENST00000553521 HMGXB3Q12766 1538 aa25.35■■□□□ 1.65
SRSF5-203ENST00000553521 TRIM41Q8WV44 630 aa25.26■■□□□ 1.63
SRSF5-203ENST00000553521 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
SRSF5-203ENST00000553521 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
SRSF5-203ENST00000553521 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
SRSF5-203ENST00000553521 CFTRP13569 1480 aa24.86■■□□□ 1.57
SRSF5-203ENST00000553521 LOC105371045A0A1W2PR82 267 aa24.78■■□□□ 1.56
SRSF5-203ENST00000553521 CADPSQ9ULU8 1353 aa24.75■■□□□ 1.55
SRSF5-203ENST00000553521 FAM9AQ8IZU1 332 aaPredicted RBP24.74■■□□□ 1.55
SRSF5-203ENST00000553521 SYNJ1O43426 1573 aa24.71■■□□□ 1.55
SRSF5-203ENST00000553521 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
SRSF5-203ENST00000553521 EEA1Q15075 1411 aa24.65■■□□□ 1.54
SRSF5-203ENST00000553521 TOP2BQ02880 1626 aa24.63■■□□□ 1.53
SRSF5-203ENST00000553521 BIVM-ERCC5R4GMW8 1640 aa24.59■■□□□ 1.53
SRSF5-203ENST00000553521 SOGA1O94964 1423 aa24.58■■□□□ 1.52
SRSF5-203ENST00000553521 CUX1P39880 1505 aa24.51■■□□□ 1.51
SRSF5-203ENST00000553521 LAMC3Q9Y6N6 1575 aa24.48■■□□□ 1.51
SRSF5-203ENST00000553521 CSRNP3Q8WYN3 585 aa24.48■■□□□ 1.51
SRSF5-203ENST00000553521 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.5
SRSF5-203ENST00000553521 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.5
SRSF5-203ENST00000553521 NESP48681 1621 aa24.4■■□□□ 1.5
SRSF5-203ENST00000553521 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
SRSF5-203ENST00000553521 EHMT2Q96KQ7 1210 aa24.34■■□□□ 1.49
SRSF5-203ENST00000553521 PDS5BQ9NTI5 1447 aa24.31■■□□□ 1.48
SRSF5-203ENST00000553521 CEP164Q9UPV0 1460 aa24.28■■□□□ 1.48
SRSF5-203ENST00000553521 GOLGA3Q08378 1498 aa24.27■■□□□ 1.48
SRSF5-203ENST00000553521 KIF21BO75037 1637 aa24.26■■□□□ 1.47
SRSF5-203ENST00000553521 DNMBPQ6XZF7 1577 aa24.26■■□□□ 1.47
SRSF5-203ENST00000553521 TNIKQ9UKE5 1360 aa24.25■■□□□ 1.47
SRSF5-203ENST00000553521 KIF27Q86VH2 1401 aa24.24■■□□□ 1.47
SRSF5-203ENST00000553521 FGD5Q6ZNL6 1462 aa24.22■■□□□ 1.47
SRSF5-203ENST00000553521 TOPBP1Q92547 1522 aa24.2■■□□□ 1.46
SRSF5-203ENST00000553521 UBTFP17480 764 aaKnown RBP24.16■■□□□ 1.46
SRSF5-203ENST00000553521 URB2Q14146 1524 aaKnown RBP24.11■■□□□ 1.45
SRSF5-203ENST00000553521 CUX2O14529 1486 aa24.11■■□□□ 1.45
SRSF5-203ENST00000553521 PRXQ9BXM0 1461 aa24.11■■□□□ 1.45
SRSF5-203ENST00000553521 KIF21AQ7Z4S6 1674 aa24.09■■□□□ 1.45
SRSF5-203ENST00000553521 CEP162Q5TB80 1403 aa24.09■■□□□ 1.45
SRSF5-203ENST00000553521 POLA1P09884 1462 aaPredicted RBP24.09■■□□□ 1.45
SRSF5-203ENST00000553521 ERICH3Q5RHP9 1530 aa24.09■■□□□ 1.45
SRSF5-203ENST00000553521 RAPGEF2Q9Y4G8 1499 aa24.07■■□□□ 1.44
SRSF5-203ENST00000553521 ABCA10Q8WWZ4 1543 aa24.04■■□□□ 1.44
SRSF5-203ENST00000553521 IGF1RP08069 1367 aa24■■□□□ 1.43
SRSF5-203ENST00000553521 RAD54L2Q9Y4B4 1467 aa23.99■■□□□ 1.43
SRSF5-203ENST00000553521 MRC2Q9UBG0 1479 aa23.96■■□□□ 1.43
SRSF5-203ENST00000553521 WDR97A6NE52 1622 aa23.89■■□□□ 1.42
SRSF5-203ENST00000553521 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.41
SRSF5-203ENST00000553521 CLIP1P30622 1438 aa23.88■■□□□ 1.41
SRSF5-203ENST00000553521 TRIM26Q12899 539 aaPredicted RBP23.85■■□□□ 1.41
SRSF5-203ENST00000553521 PCGF6Q9BYE7 350 aa23.83■■□□□ 1.41
SRSF5-203ENST00000553521 WDR62O43379 1518 aa23.81■■□□□ 1.4
SRSF5-203ENST00000553521 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
SRSF5-203ENST00000553521 ERCC6Q03468 1493 aa23.8■■□□□ 1.4
SRSF5-203ENST00000553521 ABCA5Q8WWZ7 1642 aa23.8■■□□□ 1.4
SRSF5-203ENST00000553521 CUL7Q14999 1698 aa23.78■■□□□ 1.4
SRSF5-203ENST00000553521 GAPVD1Q14C86 1478 aa23.77■■□□□ 1.4
SRSF5-203ENST00000553521 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
SRSF5-203ENST00000553521 IFT140Q96RY7 1462 aa23.71■■□□□ 1.39
SRSF5-203ENST00000553521 VPS8Q8N3P4 1428 aa23.7■■□□□ 1.38
SRSF5-203ENST00000553521 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
SRSF5-203ENST00000553521 RANGAP1P46060 587 aaPredicted RBP23.64■■□□□ 1.38
SRSF5-203ENST00000553521 ARAP1Q96P48 1450 aa23.6■■□□□ 1.37
SRSF5-203ENST00000553521 AQRO60306 1485 aaKnown RBP eCLIP23.58■■□□□ 1.363e-8■■■■□ 24.7
SRSF5-203ENST00000553521 ARHGAP35Q9NRY4 1499 aa23.58■■□□□ 1.36
SRSF5-203ENST00000553521 PPARGC1BQ86YN6 1023 aaKnown RBP23.57■■□□□ 1.36
SRSF5-203ENST00000553521 GRIN2BQ13224 1484 aa23.57■■□□□ 1.36
SRSF5-203ENST00000553521 PBRM1Q86U86 1689 aa23.57■■□□□ 1.36
SRSF5-203ENST00000553521 FHAD1B1AJZ9 1412 aa23.53■■□□□ 1.36
SRSF5-203ENST00000553521 ZNF608Q9ULD9 1512 aaPredicted RBP23.52■■□□□ 1.36
SRSF5-203ENST00000553521 APLP2Q06481 763 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms