RNA–Protein interactions for RNA: ENST00000600147.5

RPL18A-205, Transcript of ribosomal protein L18a, humanhuman

TSL 5 BASIC

Gene RPL18A, Length 1,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL18A-205ENST00000600147 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
RPL18A-205ENST00000600147 CCDC180Q9P1Z9 1646 aa29.62■■■□□ 2.33
RPL18A-205ENST00000600147 ABCC9O60706 1549 aa28.5■■■□□ 2.15
RPL18A-205ENST00000600147 ZCCHC6Q5VYS8 1495 aaKnown RBP27.88■■■□□ 2.05
RPL18A-205ENST00000600147 NACADO15069 1562 aa27.67■■■□□ 2.02
RPL18A-205ENST00000600147 RB1CC1Q8TDY2 1594 aa27.63■■■□□ 2.01
RPL18A-205ENST00000600147 DCAF1Q9Y4B6 1507 aa27.63■■■□□ 2.01
RPL18A-205ENST00000600147 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
RPL18A-205ENST00000600147 DCAF8L2P0C7V8 631 aa27.51■■□□□ 1.99
RPL18A-205ENST00000600147 UNC13AQ9UPW8 1703 aa27.14■■□□□ 1.94
RPL18A-205ENST00000600147 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
RPL18A-205ENST00000600147 BICRAQ9NZM4 1560 aa26.8■■□□□ 1.88
RPL18A-205ENST00000600147 PABPN1Q86U42 306 aaKnown RBP eCLIP26.58■■□□□ 1.85
RPL18A-205ENST00000600147 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
RPL18A-205ENST00000600147 EIF4G1Q04637 1599 aaKnown RBP26.05■■□□□ 1.76
RPL18A-205ENST00000600147 CECR2Q9BXF3 1484 aa25.9■■□□□ 1.74
RPL18A-205ENST00000600147 CC2D2AQ9P2K1 1620 aa25.86■■□□□ 1.73
RPL18A-205ENST00000600147 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
RPL18A-205ENST00000600147 BAZ1AQ9NRL2 1556 aaPredicted RBP25.84■■□□□ 1.73
RPL18A-205ENST00000600147 DNAJC5BQ9UF47 199 aa25.75■■□□□ 1.71
RPL18A-205ENST00000600147 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
RPL18A-205ENST00000600147 PEG3Q9GZU2 1588 aa25.6■■□□□ 1.69
RPL18A-205ENST00000600147 SMARCA2P51531 1590 aa25.57■■□□□ 1.68
RPL18A-205ENST00000600147 ATAD2BQ9ULI0 1458 aa25.55■■□□□ 1.68
RPL18A-205ENST00000600147 WIZO95785 1651 aa25.48■■□□□ 1.67
RPL18A-205ENST00000600147 RSF1Q96T23 1441 aaPredicted RBP25.48■■□□□ 1.67
RPL18A-205ENST00000600147 NCAPD3P42695 1498 aa25.47■■□□□ 1.67
RPL18A-205ENST00000600147 HMGXB3Q12766 1538 aa25.46■■□□□ 1.67
RPL18A-205ENST00000600147 BAZ1BQ9UIG0 1483 aaKnown RBP25.38■■□□□ 1.65
RPL18A-205ENST00000600147 TOP2AP11388 1531 aaKnown RBP25.23■■□□□ 1.63
RPL18A-205ENST00000600147 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
RPL18A-205ENST00000600147 CCDC88BA6NC98 1476 aa24.86■■□□□ 1.57
RPL18A-205ENST00000600147 LAMC3Q9Y6N6 1575 aa24.82■■□□□ 1.56
RPL18A-205ENST00000600147 NESP48681 1621 aa24.77■■□□□ 1.56
RPL18A-205ENST00000600147 PRDM2Q13029 1718 aa24.73■■□□□ 1.55
RPL18A-205ENST00000600147 CADPSQ9ULU8 1353 aa24.71■■□□□ 1.55
RPL18A-205ENST00000600147 CFTRP13569 1480 aa24.68■■□□□ 1.54
RPL18A-205ENST00000600147 KIF21AQ7Z4S6 1674 aa24.61■■□□□ 1.53
RPL18A-205ENST00000600147 PDS5BQ9NTI5 1447 aa24.55■■□□□ 1.52
RPL18A-205ENST00000600147 ERCC6Q03468 1493 aa24.53■■□□□ 1.52
RPL18A-205ENST00000600147 FANCD2Q9BXW9 1451 aa24.48■■□□□ 1.51
RPL18A-205ENST00000600147 CEP164Q9UPV0 1460 aa24.44■■□□□ 1.5
RPL18A-205ENST00000600147 THOC2Q8NI27 1593 aaKnown RBP24.43■■□□□ 1.5
RPL18A-205ENST00000600147 MRC2Q9UBG0 1479 aa24.33■■□□□ 1.49
RPL18A-205ENST00000600147 WDR62O43379 1518 aa24.28■■□□□ 1.48
RPL18A-205ENST00000600147 URB2Q14146 1524 aaKnown RBP24.23■■□□□ 1.47
RPL18A-205ENST00000600147 CUX2O14529 1486 aa24.19■■□□□ 1.46
RPL18A-205ENST00000600147 DNMBPQ6XZF7 1577 aa24.19■■□□□ 1.46
RPL18A-205ENST00000600147 TOPBP1Q92547 1522 aa24.14■■□□□ 1.46
RPL18A-205ENST00000600147 ABCC8Q09428 1581 aa24.14■■□□□ 1.46
RPL18A-205ENST00000600147 CUX1P39880 1505 aa24.1■■□□□ 1.45
RPL18A-205ENST00000600147 BIVM-ERCC5R4GMW8 1640 aa24.05■■□□□ 1.44
RPL18A-205ENST00000600147 SYNJ1O43426 1573 aa24.02■■□□□ 1.44
RPL18A-205ENST00000600147 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.445e-6■■□□□ 12.5
RPL18A-205ENST00000600147 TOP2BQ02880 1626 aa24.01■■□□□ 1.43
RPL18A-205ENST00000600147 POLA1P09884 1462 aaPredicted RBP23.95■■□□□ 1.42
RPL18A-205ENST00000600147 FGD5Q6ZNL6 1462 aa23.95■■□□□ 1.42
RPL18A-205ENST00000600147 DNAJC5Q9H3Z4 198 aa23.91■■□□□ 1.42
RPL18A-205ENST00000600147 TARBP1Q13395 1621 aaKnown RBP23.91■■□□□ 1.42
RPL18A-205ENST00000600147 IFT140Q96RY7 1462 aa23.89■■□□□ 1.42
RPL18A-205ENST00000600147 WDR97A6NE52 1622 aa23.87■■□□□ 1.41
RPL18A-205ENST00000600147 RAD54L2Q9Y4B4 1467 aa23.81■■□□□ 1.4
RPL18A-205ENST00000600147 SOGA1O94964 1423 aa23.79■■□□□ 1.4
RPL18A-205ENST00000600147 EIF4G3O43432 1585 aaKnown RBP23.77■■□□□ 1.4
RPL18A-205ENST00000600147 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
RPL18A-205ENST00000600147 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
RPL18A-205ENST00000600147 ABCA5Q8WWZ7 1642 aa23.69■■□□□ 1.38
RPL18A-205ENST00000600147 TRIM41Q8WV44 630 aa23.65■■□□□ 1.38
RPL18A-205ENST00000600147 PBRM1Q86U86 1689 aa23.65■■□□□ 1.38
RPL18A-205ENST00000600147 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
RPL18A-205ENST00000600147 AQRO60306 1485 aaKnown RBP eCLIP23.61■■□□□ 1.371e-7■■■■■ 39.5
RPL18A-205ENST00000600147 TDRD9Q8NDG6 1382 aaKnown RBP23.6■■□□□ 1.37
RPL18A-205ENST00000600147 GAPVD1Q14C86 1478 aa23.57■■□□□ 1.36
RPL18A-205ENST00000600147 GRIN2BQ13224 1484 aa23.53■■□□□ 1.36
RPL18A-205ENST00000600147 KIF27Q86VH2 1401 aa23.48■■□□□ 1.35
RPL18A-205ENST00000600147 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
RPL18A-205ENST00000600147 SNAPC4Q5SXM2 1469 aa23.47■■□□□ 1.35
RPL18A-205ENST00000600147 MAGI1Q96QZ7 1491 aaPredicted RBP23.45■■□□□ 1.35
RPL18A-205ENST00000600147 CHD1O14646 1710 aa23.44■■□□□ 1.34
RPL18A-205ENST00000600147 ADAMTS12P58397 1594 aa23.44■■□□□ 1.34
RPL18A-205ENST00000600147 CUL7Q14999 1698 aa23.39■■□□□ 1.34
RPL18A-205ENST00000600147 RUSC2Q8N2Y8 1516 aa23.37■■□□□ 1.33
RPL18A-205ENST00000600147 SYNJ2O15056 1496 aa23.35■■□□□ 1.33
RPL18A-205ENST00000600147 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
RPL18A-205ENST00000600147 IGF1RP08069 1367 aa23.29■■□□□ 1.32
RPL18A-205ENST00000600147 EEA1Q15075 1411 aa23.28■■□□□ 1.32
RPL18A-205ENST00000600147 GRIN2AQ12879 1464 aa23.25■■□□□ 1.31
RPL18A-205ENST00000600147 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
RPL18A-205ENST00000600147 FBLN2P98095 1184 aa23.18■■□□□ 1.3
RPL18A-205ENST00000600147 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
RPL18A-205ENST00000600147 CEP170Q5SW79 1584 aa23.16■■□□□ 1.3
RPL18A-205ENST00000600147 CLASP1Q7Z460 1538 aa23.14■■□□□ 1.3
RPL18A-205ENST00000600147 PRXQ9BXM0 1461 aa23.14■■□□□ 1.29
RPL18A-205ENST00000600147 RAPGEF2Q9Y4G8 1499 aa23.12■■□□□ 1.29
RPL18A-205ENST00000600147 NUP160Q12769 1436 aa23.12■■□□□ 1.29
RPL18A-205ENST00000600147 OSCARQ8IYS5 282 aa23.11■■□□□ 1.29
RPL18A-205ENST00000600147 KIF21BO75037 1637 aa23.09■■□□□ 1.29
RPL18A-205ENST00000600147 CSRNP3Q8WYN3 585 aa23.09■■□□□ 1.29
RPL18A-205ENST00000600147 FAM9AQ8IZU1 332 aaPredicted RBP23.07■■□□□ 1.28
RPL18A-205ENST00000600147 CTTNBP2Q8WZ74 1663 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms