RNA–Protein interactions for RNA: ENST00000367669.7

RFWD2-204, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFWD2, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-204ENST00000367669 NISCHQ9Y2I1 1504 aa33.78■■■■□ 3
RFWD2-204ENST00000367669 SHROOM4Q9ULL8 1493 aa29.61■■■□□ 2.33
RFWD2-204ENST00000367669 DCAF8L2P0C7V8 631 aa29.18■■■□□ 2.26
RFWD2-204ENST00000367669 SUPT5HO00267 1087 aaKnown RBP28.97■■■□□ 2.23
RFWD2-204ENST00000367669 ZCCHC6Q5VYS8 1495 aaKnown RBP28.45■■■□□ 2.15
RFWD2-204ENST00000367669 CCDC180Q9P1Z9 1646 aa28.42■■■□□ 2.14
RFWD2-204ENST00000367669 CHIC1Q5VXU3 224 aa27.65■■■□□ 2.02
RFWD2-204ENST00000367669 MYO15BQ96JP2 1530 aa27.49■■□□□ 1.99
RFWD2-204ENST00000367669 ABCC9O60706 1549 aa27.33■■□□□ 1.97
RFWD2-204ENST00000367669 DCAF1Q9Y4B6 1507 aa27.28■■□□□ 1.96
RFWD2-204ENST00000367669 SCRIBQ14160 1630 aa27.28■■□□□ 1.96
RFWD2-204ENST00000367669 LOC105371045A0A1W2PR82 267 aa27.2■■□□□ 1.94
RFWD2-204ENST00000367669 EHMT2Q96KQ7 1210 aa27.07■■□□□ 1.92
RFWD2-204ENST00000367669 PCGF6Q9BYE7 350 aa27■■□□□ 1.91
RFWD2-204ENST00000367669 FAM9AQ8IZU1 332 aaPredicted RBP26.93■■□□□ 1.9
RFWD2-204ENST00000367669 RSF1Q96T23 1441 aaPredicted RBP26.83■■□□□ 1.89
RFWD2-204ENST00000367669 TRIM41Q8WV44 630 aa26.72■■□□□ 1.87
RFWD2-204ENST00000367669 CECR2Q9BXF3 1484 aa26.68■■□□□ 1.86
RFWD2-204ENST00000367669 RB1CC1Q8TDY2 1594 aa26.59■■□□□ 1.85
RFWD2-204ENST00000367669 HRCP23327 699 aa26.49■■□□□ 1.83
RFWD2-204ENST00000367669 NACADO15069 1562 aa26.48■■□□□ 1.83
RFWD2-204ENST00000367669 PPARGC1BQ86YN6 1023 aaKnown RBP26.47■■□□□ 1.83
RFWD2-204ENST00000367669 MROH2BQ7Z745 1585 aa26.45■■□□□ 1.82
RFWD2-204ENST00000367669 PABPN1Q86U42 306 aaKnown RBP eCLIP26.38■■□□□ 1.81
RFWD2-204ENST00000367669 WIZO95785 1651 aa26.32■■□□□ 1.8
RFWD2-204ENST00000367669 TRIM26Q12899 539 aaPredicted RBP26.11■■□□□ 1.77
RFWD2-204ENST00000367669 TTBK1Q5TCY1 1321 aaPredicted RBP26.07■■□□□ 1.76
RFWD2-204ENST00000367669 BAZ1AQ9NRL2 1556 aaPredicted RBP25.91■■□□□ 1.74
RFWD2-204ENST00000367669 ABCC8Q09428 1581 aa25.85■■□□□ 1.73
RFWD2-204ENST00000367669 UNC13AQ9UPW8 1703 aa25.82■■□□□ 1.72
RFWD2-204ENST00000367669 CCDC88BA6NC98 1476 aa25.77■■□□□ 1.72
RFWD2-204ENST00000367669 SMARCA4P51532 1647 aa25.75■■□□□ 1.71
RFWD2-204ENST00000367669 TOP2AP11388 1531 aaKnown RBP25.64■■□□□ 1.69
RFWD2-204ENST00000367669 RANGAP1P46060 587 aaPredicted RBP25.63■■□□□ 1.69
RFWD2-204ENST00000367669 UBTFP17480 764 aaKnown RBP25.62■■□□□ 1.69
RFWD2-204ENST00000367669 SOGA1O94964 1423 aa25.59■■□□□ 1.69
RFWD2-204ENST00000367669 SMARCA2P51531 1590 aa25.58■■□□□ 1.69
RFWD2-204ENST00000367669 BICRAQ9NZM4 1560 aa25.53■■□□□ 1.68
RFWD2-204ENST00000367669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.52■■□□□ 1.68
RFWD2-204ENST00000367669 RUSC2Q8N2Y8 1516 aa25.51■■□□□ 1.67
RFWD2-204ENST00000367669 EIF4G1Q04637 1599 aaKnown RBP25.48■■□□□ 1.67
RFWD2-204ENST00000367669 CSRNP3Q8WYN3 585 aa25.4■■□□□ 1.66
RFWD2-204ENST00000367669 CCER1Q8TC90 406 aaPredicted RBP25.34■■□□□ 1.65
RFWD2-204ENST00000367669 CEP162Q5TB80 1403 aa25.28■■□□□ 1.64
RFWD2-204ENST00000367669 ZEB1P37275 1124 aaPredicted RBP25.26■■□□□ 1.63
RFWD2-204ENST00000367669 WRNQ14191 1432 aaPredicted RBP eCLIP25.26■■□□□ 1.63
RFWD2-204ENST00000367669 BAZ1BQ9UIG0 1483 aaKnown RBP25.24■■□□□ 1.63
RFWD2-204ENST00000367669 ATAD2BQ9ULI0 1458 aa25.22■■□□□ 1.63
RFWD2-204ENST00000367669 SYNJ1O43426 1573 aa25.09■■□□□ 1.61
RFWD2-204ENST00000367669 TNIKQ9UKE5 1360 aa25.08■■□□□ 1.6
RFWD2-204ENST00000367669 HNRNPUL2Q1KMD3 747 aaKnown RBP25.07■■□□□ 1.6
RFWD2-204ENST00000367669 SLC24A1O60721 1099 aa25.05■■□□□ 1.6
RFWD2-204ENST00000367669 GOLGA3Q08378 1498 aa24.99■■□□□ 1.59
RFWD2-204ENST00000367669 PEG3Q9GZU2 1588 aa24.95■■□□□ 1.58
RFWD2-204ENST00000367669 EEA1Q15075 1411 aa24.92■■□□□ 1.58
RFWD2-204ENST00000367669 APLP2Q06481 763 aa24.91■■□□□ 1.58
RFWD2-204ENST00000367669 RAPGEF2Q9Y4G8 1499 aa24.88■■□□□ 1.57
RFWD2-204ENST00000367669 CLIP1P30622 1438 aa24.86■■□□□ 1.57
RFWD2-204ENST00000367669 CEP164Q9UPV0 1460 aa24.83■■□□□ 1.56
RFWD2-204ENST00000367669 ITGAEP38570 1179 aa24.64■■□□□ 1.54
RFWD2-204ENST00000367669 DIEXFQ68CQ4 756 aaKnown RBP24.62■■□□□ 1.53
RFWD2-204ENST00000367669 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
RFWD2-204ENST00000367669 TOP2BQ02880 1626 aa24.59■■□□□ 1.53
RFWD2-204ENST00000367669 KIF21BO75037 1637 aa24.59■■□□□ 1.53
RFWD2-204ENST00000367669 VPS8Q8N3P4 1428 aa24.58■■□□□ 1.53
RFWD2-204ENST00000367669 KANK4Q5T7N3 995 aaPredicted RBP24.57■■□□□ 1.52
RFWD2-204ENST00000367669 CUX1P39880 1505 aa24.57■■□□□ 1.52
RFWD2-204ENST00000367669 ATP1B4Q9UN42 357 aaPredicted RBP24.57■■□□□ 1.52
RFWD2-204ENST00000367669 P3H3Q8IVL6 736 aa24.55■■□□□ 1.52
RFWD2-204ENST00000367669 SCAF1Q9H7N4 1312 aaKnown RBP24.48■■□□□ 1.51
RFWD2-204ENST00000367669 YTHDC1Q96MU7 727 aaKnown RBP24.47■■□□□ 1.51
RFWD2-204ENST00000367669 KIF27Q86VH2 1401 aa24.46■■□□□ 1.51
RFWD2-204ENST00000367669 HMGXB3Q12766 1538 aa24.45■■□□□ 1.5
RFWD2-204ENST00000367669 CFTRP13569 1480 aa24.43■■□□□ 1.5
RFWD2-204ENST00000367669 CUX2O14529 1486 aa24.41■■□□□ 1.5
RFWD2-204ENST00000367669 BIVM-ERCC5R4GMW8 1640 aa24.4■■□□□ 1.5
RFWD2-204ENST00000367669 PRXQ9BXM0 1461 aa24.38■■□□□ 1.49
RFWD2-204ENST00000367669 ARAP1Q96P48 1450 aa24.36■■□□□ 1.49
RFWD2-204ENST00000367669 ZNF316A6NFI3 1004 aaPredicted RBP24.36■■□□□ 1.49
RFWD2-204ENST00000367669 NEUROD1Q13562 356 aa24.35■■□□□ 1.49
RFWD2-204ENST00000367669 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
RFWD2-204ENST00000367669 DNAJC5BQ9UF47 199 aa24.32■■□□□ 1.48
RFWD2-204ENST00000367669 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
RFWD2-204ENST00000367669 NESP48681 1621 aa24.26■■□□□ 1.47
RFWD2-204ENST00000367669 IGF1RP08069 1367 aa24.25■■□□□ 1.47
RFWD2-204ENST00000367669 FGD5Q6ZNL6 1462 aa24.24■■□□□ 1.47
RFWD2-204ENST00000367669 CARMIL1Q5VZK9 1371 aa24.22■■□□□ 1.47
RFWD2-204ENST00000367669 ERICH3Q5RHP9 1530 aa24.2■■□□□ 1.46
RFWD2-204ENST00000367669 RAD54L2Q9Y4B4 1467 aa24.2■■□□□ 1.46
RFWD2-204ENST00000367669 ARHGAP35Q9NRY4 1499 aa24.19■■□□□ 1.46
RFWD2-204ENST00000367669 MIER1Q8N108 512 aa24.19■■□□□ 1.46
RFWD2-204ENST00000367669 ACIN1Q9UKV3 1341 aaKnown RBP24.18■■□□□ 1.46
RFWD2-204ENST00000367669 FAM50AQ14320 339 aaKnown RBP24.18■■□□□ 1.46
RFWD2-204ENST00000367669 FANCD2Q9BXW9 1451 aa24.14■■□□□ 1.46
RFWD2-204ENST00000367669 GTF3C3Q9Y5Q9 886 aa24.12■■□□□ 1.45
RFWD2-204ENST00000367669 CENPBP07199 599 aaPredicted RBP24.08■■□□□ 1.44
RFWD2-204ENST00000367669 DHX57Q6P158 1386 aaKnown RBP24.04■■□□□ 1.44
RFWD2-204ENST00000367669 CCNB3Q8WWL7 1395 aa24.03■■□□□ 1.44
RFWD2-204ENST00000367669 TDRD9Q8NDG6 1382 aaKnown RBP24.02■■□□□ 1.44
RFWD2-204ENST00000367669 ARID3CA6NKF2 412 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms