RNA–Protein interactions for RNA: ENST00000222247.9

RPL18A-201, Transcript of ribosomal protein L18a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL18A, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL18A-201ENST00000222247 NISCHQ9Y2I1 1504 aa37.42■■■■□ 3.58
RPL18A-201ENST00000222247 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
RPL18A-201ENST00000222247 ABCC9O60706 1549 aa31.95■■■□□ 2.71
RPL18A-201ENST00000222247 ZCCHC6Q5VYS8 1495 aaKnown RBP31.3■■■□□ 2.6
RPL18A-201ENST00000222247 DCAF8L2P0C7V8 631 aa31.02■■■□□ 2.56
RPL18A-201ENST00000222247 DCAF1Q9Y4B6 1507 aa30.95■■■□□ 2.55
RPL18A-201ENST00000222247 NACADO15069 1562 aa30.94■■■□□ 2.54
RPL18A-201ENST00000222247 MYO15BQ96JP2 1530 aa30.91■■■□□ 2.54
RPL18A-201ENST00000222247 RB1CC1Q8TDY2 1594 aa30.86■■■□□ 2.53
RPL18A-201ENST00000222247 SCRIBQ14160 1630 aa30.24■■■□□ 2.43
RPL18A-201ENST00000222247 UNC13AQ9UPW8 1703 aa30.18■■■□□ 2.42
RPL18A-201ENST00000222247 BICRAQ9NZM4 1560 aa29.99■■■□□ 2.39
RPL18A-201ENST00000222247 PABPN1Q86U42 306 aaKnown RBP eCLIP29.94■■■□□ 2.38
RPL18A-201ENST00000222247 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
RPL18A-201ENST00000222247 CECR2Q9BXF3 1484 aa29.15■■■□□ 2.26
RPL18A-201ENST00000222247 EIF4G1Q04637 1599 aaKnown RBP29.13■■■□□ 2.25
RPL18A-201ENST00000222247 DNAJC5BQ9UF47 199 aa28.95■■■□□ 2.22
RPL18A-201ENST00000222247 SMARCA4P51532 1647 aa28.94■■■□□ 2.22
RPL18A-201ENST00000222247 BAZ1AQ9NRL2 1556 aaPredicted RBP28.94■■■□□ 2.22
RPL18A-201ENST00000222247 CC2D2AQ9P2K1 1620 aa28.9■■■□□ 2.22
RPL18A-201ENST00000222247 MROH2BQ7Z745 1585 aa28.88■■■□□ 2.21
RPL18A-201ENST00000222247 RSF1Q96T23 1441 aaPredicted RBP28.7■■■□□ 2.19
RPL18A-201ENST00000222247 ATAD2BQ9ULI0 1458 aa28.68■■■□□ 2.18
RPL18A-201ENST00000222247 PEG3Q9GZU2 1588 aa28.64■■■□□ 2.18
RPL18A-201ENST00000222247 SMARCA2P51531 1590 aa28.62■■■□□ 2.17
RPL18A-201ENST00000222247 NCAPD3P42695 1498 aa28.57■■■□□ 2.16
RPL18A-201ENST00000222247 WIZO95785 1651 aa28.56■■■□□ 2.16
RPL18A-201ENST00000222247 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
RPL18A-201ENST00000222247 BAZ1BQ9UIG0 1483 aaKnown RBP28.45■■■□□ 2.14
RPL18A-201ENST00000222247 TOP2AP11388 1531 aaKnown RBP28.29■■■□□ 2.12
RPL18A-201ENST00000222247 SUPT5HO00267 1087 aaKnown RBP28.27■■■□□ 2.12
RPL18A-201ENST00000222247 CCDC88BA6NC98 1476 aa27.96■■■□□ 2.07
RPL18A-201ENST00000222247 NESP48681 1621 aa27.81■■■□□ 2.04
RPL18A-201ENST00000222247 CADPSQ9ULU8 1353 aa27.76■■■□□ 2.03
RPL18A-201ENST00000222247 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
RPL18A-201ENST00000222247 CFTRP13569 1480 aa27.71■■■□□ 2.03
RPL18A-201ENST00000222247 PDS5BQ9NTI5 1447 aa27.51■■□□□ 1.99
RPL18A-201ENST00000222247 ERCC6Q03468 1493 aa27.46■■□□□ 1.99
RPL18A-201ENST00000222247 FANCD2Q9BXW9 1451 aa27.46■■□□□ 1.99
RPL18A-201ENST00000222247 PRDM2Q13029 1718 aa27.45■■□□□ 1.99
RPL18A-201ENST00000222247 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
RPL18A-201ENST00000222247 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
RPL18A-201ENST00000222247 THOC2Q8NI27 1593 aaKnown RBP27.27■■□□□ 1.96
RPL18A-201ENST00000222247 MRC2Q9UBG0 1479 aa27.25■■□□□ 1.95
RPL18A-201ENST00000222247 URB2Q14146 1524 aaKnown RBP27.2■■□□□ 1.94
RPL18A-201ENST00000222247 WDR62O43379 1518 aa27.16■■□□□ 1.94
RPL18A-201ENST00000222247 ABCC8Q09428 1581 aa27.1■■□□□ 1.93
RPL18A-201ENST00000222247 TOPBP1Q92547 1522 aa27.08■■□□□ 1.93
RPL18A-201ENST00000222247 CUX1P39880 1505 aa27.07■■□□□ 1.92
RPL18A-201ENST00000222247 DNMBPQ6XZF7 1577 aa27.07■■□□□ 1.92
RPL18A-201ENST00000222247 WRNQ14191 1432 aaPredicted RBP eCLIP27.02■■□□□ 1.925e-6■■□□□ 12.5
RPL18A-201ENST00000222247 CUX2O14529 1486 aa27.01■■□□□ 1.91
RPL18A-201ENST00000222247 SYNJ1O43426 1573 aa26.97■■□□□ 1.91
RPL18A-201ENST00000222247 TOP2BQ02880 1626 aa26.91■■□□□ 1.9
RPL18A-201ENST00000222247 BIVM-ERCC5R4GMW8 1640 aa26.9■■□□□ 1.9
RPL18A-201ENST00000222247 POLA1P09884 1462 aaPredicted RBP26.89■■□□□ 1.9
RPL18A-201ENST00000222247 FGD5Q6ZNL6 1462 aa26.89■■□□□ 1.9
RPL18A-201ENST00000222247 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
RPL18A-201ENST00000222247 IFT140Q96RY7 1462 aa26.78■■□□□ 1.88
RPL18A-201ENST00000222247 TARBP1Q13395 1621 aaKnown RBP26.75■■□□□ 1.87
RPL18A-201ENST00000222247 SOGA1O94964 1423 aa26.74■■□□□ 1.87
RPL18A-201ENST00000222247 ZNF608Q9ULD9 1512 aaPredicted RBP26.68■■□□□ 1.86
RPL18A-201ENST00000222247 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
RPL18A-201ENST00000222247 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
RPL18A-201ENST00000222247 WDR97A6NE52 1622 aa26.64■■□□□ 1.85
RPL18A-201ENST00000222247 ABCA10Q8WWZ4 1543 aa26.64■■□□□ 1.85
RPL18A-201ENST00000222247 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.84
RPL18A-201ENST00000222247 EIF4G3O43432 1585 aaKnown RBP26.56■■□□□ 1.84
RPL18A-201ENST00000222247 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.841e-7■■■■■ 39.5
RPL18A-201ENST00000222247 ABCA5Q8WWZ7 1642 aa26.5■■□□□ 1.83
RPL18A-201ENST00000222247 GAPVD1Q14C86 1478 aa26.46■■□□□ 1.83
RPL18A-201ENST00000222247 KIF27Q86VH2 1401 aa26.39■■□□□ 1.82
RPL18A-201ENST00000222247 GRIN2BQ13224 1484 aa26.39■■□□□ 1.82
RPL18A-201ENST00000222247 RUSC2Q8N2Y8 1516 aa26.37■■□□□ 1.81
RPL18A-201ENST00000222247 PBRM1Q86U86 1689 aa26.35■■□□□ 1.81
RPL18A-201ENST00000222247 SNAPC4Q5SXM2 1469 aa26.34■■□□□ 1.81
RPL18A-201ENST00000222247 ERICH3Q5RHP9 1530 aa26.3■■□□□ 1.8
RPL18A-201ENST00000222247 IGF1RP08069 1367 aa26.27■■□□□ 1.8
RPL18A-201ENST00000222247 MAGI1Q96QZ7 1491 aaPredicted RBP26.27■■□□□ 1.8
RPL18A-201ENST00000222247 ADAMTS12P58397 1594 aa26.23■■□□□ 1.79
RPL18A-201ENST00000222247 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
RPL18A-201ENST00000222247 FHAD1B1AJZ9 1412 aa26.16■■□□□ 1.78
RPL18A-201ENST00000222247 EEA1Q15075 1411 aa26.16■■□□□ 1.78
RPL18A-201ENST00000222247 CUL7Q14999 1698 aa26.13■■□□□ 1.77
RPL18A-201ENST00000222247 FAM9AQ8IZU1 332 aaPredicted RBP26.13■■□□□ 1.77
RPL18A-201ENST00000222247 CARMIL1Q5VZK9 1371 aa26.1■■□□□ 1.77
RPL18A-201ENST00000222247 CHD1O14646 1710 aa26.1■■□□□ 1.77
RPL18A-201ENST00000222247 FBLN2P98095 1184 aa26.09■■□□□ 1.77
RPL18A-201ENST00000222247 CHMP7Q8WUX9 453 aaPredicted RBP26.08■■□□□ 1.77
RPL18A-201ENST00000222247 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
RPL18A-201ENST00000222247 CSRNP3Q8WYN3 585 aa26.07■■□□□ 1.76
RPL18A-201ENST00000222247 PRXQ9BXM0 1461 aa26.05■■□□□ 1.76
RPL18A-201ENST00000222247 RAPGEF2Q9Y4G8 1499 aa25.99■■□□□ 1.75
RPL18A-201ENST00000222247 NUP160Q12769 1436 aa25.95■■□□□ 1.74
RPL18A-201ENST00000222247 CEP170Q5SW79 1584 aa25.95■■□□□ 1.74
RPL18A-201ENST00000222247 OSCARQ8IYS5 282 aa25.92■■□□□ 1.74
RPL18A-201ENST00000222247 KIF21BO75037 1637 aa25.9■■□□□ 1.74
RPL18A-201ENST00000222247 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
RPL18A-201ENST00000222247 DNAJC5Q9H3Z4 198 aa25.8■■□□□ 1.72
RPL18A-201ENST00000222247 GOLGA3Q08378 1498 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms