RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 NISCHQ9Y2I1 1504 aa41.95■■■■■ 4.31
C6orf48-207ENST00000375642 CCDC180Q9P1Z9 1646 aa37.14■■■■□ 3.54
C6orf48-207ENST00000375642 ABCC9O60706 1549 aa36.91■■■■□ 3.5
C6orf48-207ENST00000375642 DCAF8L2P0C7V8 631 aa35.13■■■■□ 3.21
C6orf48-207ENST00000375642 DNAJC5BQ9UF47 199 aa35.02■■■■□ 3.2
C6orf48-207ENST00000375642 NACADO15069 1562 aa34.96■■■■□ 3.19
C6orf48-207ENST00000375642 RB1CC1Q8TDY2 1594 aa34.96■■■■□ 3.19
C6orf48-207ENST00000375642 ZCCHC6Q5VYS8 1495 aaKnown RBP34.95■■■■□ 3.19
C6orf48-207ENST00000375642 MYO15BQ96JP2 1530 aa34.79■■■■□ 3.16
C6orf48-207ENST00000375642 DCAF1Q9Y4B6 1507 aa34.7■■■■□ 3.14
C6orf48-207ENST00000375642 PABPN1Q86U42 306 aaKnown RBP eCLIP34.23■■■■□ 3.07
C6orf48-207ENST00000375642 UNC13AQ9UPW8 1703 aa34.05■■■■□ 3.04
C6orf48-207ENST00000375642 SCRIBQ14160 1630 aa33.96■■■■□ 3.03
C6orf48-207ENST00000375642 BICRAQ9NZM4 1560 aa33.86■■■■□ 3.01
C6orf48-207ENST00000375642 SHROOM4Q9ULL8 1493 aa33.55■■■□□ 2.96
C6orf48-207ENST00000375642 CECR2Q9BXF3 1484 aa33.32■■■□□ 2.92
C6orf48-207ENST00000375642 CC2D2AQ9P2K1 1620 aa33.29■■■□□ 2.92
C6orf48-207ENST00000375642 EIF4G1Q04637 1599 aaKnown RBP33.09■■■□□ 2.89
C6orf48-207ENST00000375642 DNAJC5Q9H3Z4 198 aa32.68■■■□□ 2.82
C6orf48-207ENST00000375642 BAZ1AQ9NRL2 1556 aaPredicted RBP32.49■■■□□ 2.79
C6orf48-207ENST00000375642 SMARCA4P51532 1647 aa32.48■■■□□ 2.79
C6orf48-207ENST00000375642 MROH2BQ7Z745 1585 aa32.32■■■□□ 2.77
C6orf48-207ENST00000375642 ATAD2BQ9ULI0 1458 aa32.32■■■□□ 2.76
C6orf48-207ENST00000375642 NCAPD3P42695 1498 aa32.29■■■□□ 2.76
C6orf48-207ENST00000375642 SMARCA2P51531 1590 aa32.27■■■□□ 2.76
C6orf48-207ENST00000375642 PEG3Q9GZU2 1588 aa32.15■■■□□ 2.74
C6orf48-207ENST00000375642 CUX2O14529 1486 aa32.1■■■□□ 2.73
C6orf48-207ENST00000375642 HMGXB3Q12766 1538 aa32.09■■■□□ 2.73
C6orf48-207ENST00000375642 BAZ1BQ9UIG0 1483 aaKnown RBP32.07■■■□□ 2.72
C6orf48-207ENST00000375642 RSF1Q96T23 1441 aaPredicted RBP32.05■■■□□ 2.72
C6orf48-207ENST00000375642 ERCC6Q03468 1493 aa31.99■■■□□ 2.71
C6orf48-207ENST00000375642 WIZO95785 1651 aa31.95■■■□□ 2.7
C6orf48-207ENST00000375642 TOP2AP11388 1531 aaKnown RBP31.65■■■□□ 2.66
C6orf48-207ENST00000375642 NESP48681 1621 aa31.49■■■□□ 2.63
C6orf48-207ENST00000375642 SUPT5HO00267 1087 aaKnown RBP31.42■■■□□ 2.62
C6orf48-207ENST00000375642 CADPSQ9ULU8 1353 aa31.38■■■□□ 2.61
C6orf48-207ENST00000375642 LAMC3Q9Y6N6 1575 aa31.37■■■□□ 2.61
C6orf48-207ENST00000375642 THOC2Q8NI27 1593 aaKnown RBP31.33■■■□□ 2.61
C6orf48-207ENST00000375642 CCDC88BA6NC98 1476 aa31.31■■■□□ 2.6
C6orf48-207ENST00000375642 PDS5BQ9NTI5 1447 aa31.23■■■□□ 2.59
C6orf48-207ENST00000375642 CFTRP13569 1480 aa31.2■■■□□ 2.58
C6orf48-207ENST00000375642 TRIM41Q8WV44 630 aa31.08■■■□□ 2.57
C6orf48-207ENST00000375642 KIF21AQ7Z4S6 1674 aa31.08■■■□□ 2.57
C6orf48-207ENST00000375642 FANCD2Q9BXW9 1451 aa31■■■□□ 2.55
C6orf48-207ENST00000375642 CEP164Q9UPV0 1460 aa30.94■■■□□ 2.54
C6orf48-207ENST00000375642 MRC2Q9UBG0 1479 aa30.86■■■□□ 2.53
C6orf48-207ENST00000375642 PRDM2Q13029 1718 aa30.82■■■□□ 2.52
C6orf48-207ENST00000375642 WDR62O43379 1518 aa30.78■■■□□ 2.52
C6orf48-207ENST00000375642 URB2Q14146 1524 aaKnown RBP30.65■■■□□ 2.5
C6orf48-207ENST00000375642 ABCC8Q09428 1581 aa30.54■■■□□ 2.48
C6orf48-207ENST00000375642 OSCARQ8IYS5 282 aa30.5■■■□□ 2.47
C6orf48-207ENST00000375642 TOPBP1Q92547 1522 aa30.5■■■□□ 2.47
C6orf48-207ENST00000375642 DNMBPQ6XZF7 1577 aa30.45■■■□□ 2.47
C6orf48-207ENST00000375642 CUX1P39880 1505 aa30.31■■■□□ 2.44
C6orf48-207ENST00000375642 IFT140Q96RY7 1462 aa30.29■■■□□ 2.44
C6orf48-207ENST00000375642 POLA1P09884 1462 aaPredicted RBP30.25■■■□□ 2.43
C6orf48-207ENST00000375642 WRNQ14191 1432 aaPredicted RBP eCLIP30.22■■■□□ 2.435e-10■□□□□ 9.6
C6orf48-207ENST00000375642 FGD5Q6ZNL6 1462 aa30.2■■■□□ 2.43
C6orf48-207ENST00000375642 SOGA1O94964 1423 aa30.18■■■□□ 2.42
C6orf48-207ENST00000375642 RIMBP3CA6NJZ7 1639 aa30.16■■■□□ 2.42
C6orf48-207ENST00000375642 RIMBP3BA6NNM3 1639 aa30.16■■■□□ 2.42
C6orf48-207ENST00000375642 RIMBP3Q9UFD9 1639 aa30.16■■■□□ 2.42
C6orf48-207ENST00000375642 RAD54L2Q9Y4B4 1467 aa30.14■■■□□ 2.42
C6orf48-207ENST00000375642 ZNF608Q9ULD9 1512 aaPredicted RBP30.13■■■□□ 2.41
C6orf48-207ENST00000375642 TARBP1Q13395 1621 aaKnown RBP30.11■■■□□ 2.41
C6orf48-207ENST00000375642 TOP2BQ02880 1626 aa30.07■■■□□ 2.4
C6orf48-207ENST00000375642 SYNJ1O43426 1573 aa30.07■■■□□ 2.4
C6orf48-207ENST00000375642 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
C6orf48-207ENST00000375642 ARHGEF11O15085 1522 aa30.01■■■□□ 2.4
C6orf48-207ENST00000375642 AQRO60306 1485 aaKnown RBP eCLIP30.01■■■□□ 2.42e-13■■■■■ 92.3
C6orf48-207ENST00000375642 TDRD9Q8NDG6 1382 aaKnown RBP30.01■■■□□ 2.39
C6orf48-207ENST00000375642 EIF4G3O43432 1585 aaKnown RBP29.96■■■□□ 2.39
C6orf48-207ENST00000375642 ABCA10Q8WWZ4 1543 aa29.91■■■□□ 2.38
C6orf48-207ENST00000375642 WDR97A6NE52 1622 aa29.89■■■□□ 2.37
C6orf48-207ENST00000375642 CYB5RLQ6IPT4 315 aa29.82■■■□□ 2.36
C6orf48-207ENST00000375642 GAPVD1Q14C86 1478 aa29.8■■■□□ 2.36
C6orf48-207ENST00000375642 GRIN2BQ13224 1484 aa29.79■■■□□ 2.36
C6orf48-207ENST00000375642 TRHP20396 242 aaPredicted RBP29.75■■■□□ 2.35
C6orf48-207ENST00000375642 ABCA5Q8WWZ7 1642 aa29.73■■■□□ 2.35
C6orf48-207ENST00000375642 SNAPC4Q5SXM2 1469 aa29.71■■■□□ 2.35
C6orf48-207ENST00000375642 CHD1O14646 1710 aa29.69■■■□□ 2.34
C6orf48-207ENST00000375642 FBLN2P98095 1184 aa29.69■■■□□ 2.34
C6orf48-207ENST00000375642 MAGI1Q96QZ7 1491 aaPredicted RBP29.68■■■□□ 2.34
C6orf48-207ENST00000375642 ARAP1Q96P48 1450 aa29.67■■■□□ 2.34
C6orf48-207ENST00000375642 CHMP7Q8WUX9 453 aaPredicted RBP29.63■■■□□ 2.33
C6orf48-207ENST00000375642 PBRM1Q86U86 1689 aa29.63■■■□□ 2.33
C6orf48-207ENST00000375642 KIF27Q86VH2 1401 aa29.59■■■□□ 2.33
C6orf48-207ENST00000375642 SYNJ2O15056 1496 aa29.56■■■□□ 2.32
C6orf48-207ENST00000375642 ERICH3Q5RHP9 1530 aa29.55■■■□□ 2.32
C6orf48-207ENST00000375642 FHAD1B1AJZ9 1412 aa29.48■■■□□ 2.31
C6orf48-207ENST00000375642 IGF1RP08069 1367 aa29.47■■■□□ 2.31
C6orf48-207ENST00000375642 ADAMTS12P58397 1594 aa29.45■■■□□ 2.31
C6orf48-207ENST00000375642 GRIN2AQ12879 1464 aa29.39■■■□□ 2.3
C6orf48-207ENST00000375642 CHIC1Q5VXU3 224 aa29.38■■■□□ 2.29
C6orf48-207ENST00000375642 AEBP2Q6ZN18 517 aaPredicted RBP29.38■■■□□ 2.29
C6orf48-207ENST00000375642 CLASP1Q7Z460 1538 aa29.34■■■□□ 2.29
C6orf48-207ENST00000375642 RUSC2Q8N2Y8 1516 aa29.33■■■□□ 2.29
C6orf48-207ENST00000375642 CARMIL1Q5VZK9 1371 aa29.29■■■□□ 2.28
C6orf48-207ENST00000375642 CUL7Q14999 1698 aa29.28■■■□□ 2.28
C6orf48-207ENST00000375642 NUP160Q12769 1436 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms