RNA–Protein interactions for RNA: ENST00000554021.1

SRSF5-206, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 4 BASIC

Gene SRSF5, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-206ENST00000554021 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
SRSF5-206ENST00000554021 CCDC180Q9P1Z9 1646 aa17.48■□□□□ 0.39
SRSF5-206ENST00000554021 ABCC9O60706 1549 aa16.71■□□□□ 0.27
SRSF5-206ENST00000554021 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
SRSF5-206ENST00000554021 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
SRSF5-206ENST00000554021 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
SRSF5-206ENST00000554021 NACADO15069 1562 aa16.39■□□□□ 0.21
SRSF5-206ENST00000554021 RB1CC1Q8TDY2 1594 aa16.31■□□□□ 0.2
SRSF5-206ENST00000554021 DCAF8L2P0C7V8 631 aa16.15■□□□□ 0.18
SRSF5-206ENST00000554021 SHROOM4Q9ULL8 1493 aa15.84■□□□□ 0.13
SRSF5-206ENST00000554021 UNC13AQ9UPW8 1703 aa15.84■□□□□ 0.13
SRSF5-206ENST00000554021 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
SRSF5-206ENST00000554021 BICRAQ9NZM4 1560 aa15.79■□□□□ 0.12
SRSF5-206ENST00000554021 PABPN1Q86U42 306 aaKnown RBP eCLIP15.62■□□□□ 0.09
SRSF5-206ENST00000554021 EIF4G1Q04637 1599 aaKnown RBP15.35■□□□□ 0.05
SRSF5-206ENST00000554021 BAZ1AQ9NRL2 1556 aaPredicted RBP15.28■□□□□ 0.04
SRSF5-206ENST00000554021 CECR2Q9BXF3 1484 aa15.25■□□□□ 0.03
SRSF5-206ENST00000554021 SMARCA4P51532 1647 aa15.22■□□□□ 0.03
SRSF5-206ENST00000554021 CC2D2AQ9P2K1 1620 aa15.19■□□□□ 0.02
SRSF5-206ENST00000554021 PEG3Q9GZU2 1588 aa15.19■□□□□ 0.02
SRSF5-206ENST00000554021 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
SRSF5-206ENST00000554021 SMARCA2P51531 1590 aa15.15■□□□□ 0.02
SRSF5-206ENST00000554021 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
SRSF5-206ENST00000554021 MROH2BQ7Z745 1585 aa15.13■□□□□ 0.01
SRSF5-206ENST00000554021 ATAD2BQ9ULI0 1458 aa15.11■□□□□ 0.01
SRSF5-206ENST00000554021 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
SRSF5-206ENST00000554021 HMGXB3Q12766 1538 aa15.07■□□□□ 0
SRSF5-206ENST00000554021 BAZ1BQ9UIG0 1483 aaKnown RBP14.97□□□□□ -0.01
SRSF5-206ENST00000554021 WIZO95785 1651 aa14.93□□□□□ -0.02
SRSF5-206ENST00000554021 TOP2AP11388 1531 aaKnown RBP14.89□□□□□ -0.03
SRSF5-206ENST00000554021 SUPT5HO00267 1087 aaKnown RBP14.67□□□□□ -0.06
SRSF5-206ENST00000554021 CCDC88BA6NC98 1476 aa14.67□□□□□ -0.06
SRSF5-206ENST00000554021 LAMC3Q9Y6N6 1575 aa14.67□□□□□ -0.06
SRSF5-206ENST00000554021 CADPSQ9ULU8 1353 aa14.66□□□□□ -0.06
SRSF5-206ENST00000554021 CFTRP13569 1480 aa14.64□□□□□ -0.07
SRSF5-206ENST00000554021 PDS5BQ9NTI5 1447 aa14.57□□□□□ -0.08
SRSF5-206ENST00000554021 NESP48681 1621 aa14.53□□□□□ -0.08
SRSF5-206ENST00000554021 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
SRSF5-206ENST00000554021 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
SRSF5-206ENST00000554021 ERCC6Q03468 1493 aa14.44□□□□□ -0.1
SRSF5-206ENST00000554021 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
SRSF5-206ENST00000554021 KIF21AQ7Z4S6 1674 aa14.37□□□□□ -0.11
SRSF5-206ENST00000554021 MRC2Q9UBG0 1479 aa14.37□□□□□ -0.11
SRSF5-206ENST00000554021 ABCC8Q09428 1581 aa14.36□□□□□ -0.11
SRSF5-206ENST00000554021 THOC2Q8NI27 1593 aaKnown RBP14.34□□□□□ -0.11
SRSF5-206ENST00000554021 WDR62O43379 1518 aa14.34□□□□□ -0.11
SRSF5-206ENST00000554021 CUX2O14529 1486 aa14.33□□□□□ -0.12
SRSF5-206ENST00000554021 URB2Q14146 1524 aaKnown RBP14.27□□□□□ -0.12
SRSF5-206ENST00000554021 DNMBPQ6XZF7 1577 aa14.26□□□□□ -0.13
SRSF5-206ENST00000554021 TOPBP1Q92547 1522 aa14.24□□□□□ -0.13
SRSF5-206ENST00000554021 WRNQ14191 1432 aaPredicted RBP eCLIP14.21□□□□□ -0.13
SRSF5-206ENST00000554021 CUX1P39880 1505 aa14.2□□□□□ -0.14
SRSF5-206ENST00000554021 TOP2BQ02880 1626 aa14.18□□□□□ -0.14
SRSF5-206ENST00000554021 BIVM-ERCC5R4GMW8 1640 aa14.16□□□□□ -0.14
SRSF5-206ENST00000554021 IFT140Q96RY7 1462 aa14.15□□□□□ -0.14
SRSF5-206ENST00000554021 POLA1P09884 1462 aaPredicted RBP14.14□□□□□ -0.15
SRSF5-206ENST00000554021 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
SRSF5-206ENST00000554021 SYNJ1O43426 1573 aa14.11□□□□□ -0.15
SRSF5-206ENST00000554021 FGD5Q6ZNL6 1462 aa14.11□□□□□ -0.15
SRSF5-206ENST00000554021 TARBP1Q13395 1621 aaKnown RBP14.08□□□□□ -0.15
SRSF5-206ENST00000554021 SOGA1O94964 1423 aa14.07□□□□□ -0.16
SRSF5-206ENST00000554021 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
SRSF5-206ENST00000554021 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
SRSF5-206ENST00000554021 ZNF608Q9ULD9 1512 aaPredicted RBP13.96□□□□□ -0.17
SRSF5-206ENST00000554021 ABCA5Q8WWZ7 1642 aa13.95□□□□□ -0.18
SRSF5-206ENST00000554021 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
SRSF5-206ENST00000554021 TRIM41Q8WV44 630 aa13.94□□□□□ -0.18
SRSF5-206ENST00000554021 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
SRSF5-206ENST00000554021 CHIC1Q5VXU3 224 aa13.92□□□□□ -0.18
SRSF5-206ENST00000554021 TDRD9Q8NDG6 1382 aaKnown RBP13.92□□□□□ -0.18
SRSF5-206ENST00000554021 GRIN2BQ13224 1484 aa13.92□□□□□ -0.18
SRSF5-206ENST00000554021 KIF27Q86VH2 1401 aa13.91□□□□□ -0.18
SRSF5-206ENST00000554021 ERICH3Q5RHP9 1530 aa13.91□□□□□ -0.18
SRSF5-206ENST00000554021 AQRO60306 1485 aaKnown RBP eCLIP13.91□□□□□ -0.185e-8■■■■■ 32.3
SRSF5-206ENST00000554021 MAGI1Q96QZ7 1491 aaPredicted RBP13.9□□□□□ -0.18
SRSF5-206ENST00000554021 EEA1Q15075 1411 aa13.86□□□□□ -0.19
SRSF5-206ENST00000554021 IGF1RP08069 1367 aa13.83□□□□□ -0.2
SRSF5-206ENST00000554021 PBRM1Q86U86 1689 aa13.82□□□□□ -0.2
SRSF5-206ENST00000554021 SYNJ2O15056 1496 aa13.82□□□□□ -0.2
SRSF5-206ENST00000554021 FHAD1B1AJZ9 1412 aa13.81□□□□□ -0.2
SRSF5-206ENST00000554021 SNAPC4Q5SXM2 1469 aa13.8□□□□□ -0.2
SRSF5-206ENST00000554021 CUL7Q14999 1698 aa13.79□□□□□ -0.2
SRSF5-206ENST00000554021 ADAMTS12P58397 1594 aa13.78□□□□□ -0.2
SRSF5-206ENST00000554021 CARMIL1Q5VZK9 1371 aa13.73□□□□□ -0.21
SRSF5-206ENST00000554021 DNAJC5Q9H3Z4 198 aa13.73□□□□□ -0.21
SRSF5-206ENST00000554021 PRXQ9BXM0 1461 aa13.73□□□□□ -0.21
SRSF5-206ENST00000554021 OSCARQ8IYS5 282 aa13.72□□□□□ -0.21
SRSF5-206ENST00000554021 CHMP7Q8WUX9 453 aaPredicted RBP13.72□□□□□ -0.21
SRSF5-206ENST00000554021 RUSC2Q8N2Y8 1516 aa13.72□□□□□ -0.21
SRSF5-206ENST00000554021 GRIN2AQ12879 1464 aa13.72□□□□□ -0.21
SRSF5-206ENST00000554021 CSRNP3Q8WYN3 585 aa13.71□□□□□ -0.21
SRSF5-206ENST00000554021 NUP160Q12769 1436 aa13.71□□□□□ -0.22
SRSF5-206ENST00000554021 RAPGEF2Q9Y4G8 1499 aa13.68□□□□□ -0.22
SRSF5-206ENST00000554021 CHD1O14646 1710 aa13.67□□□□□ -0.22
SRSF5-206ENST00000554021 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
SRSF5-206ENST00000554021 KIF21BO75037 1637 aa13.63□□□□□ -0.23
SRSF5-206ENST00000554021 FBLN2P98095 1184 aa13.62□□□□□ -0.23
SRSF5-206ENST00000554021 KIAA0586Q9BVV6 1533 aa13.62□□□□□ -0.23
SRSF5-206ENST00000554021 CEP170Q5SW79 1584 aa13.61□□□□□ -0.23
SRSF5-206ENST00000554021 SHROOM2Q13796 1616 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms