RNA–Protein interactions for RNA: ENST00000511032.5

DHFR-205, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-205ENST00000511032 NISCHQ9Y2I1 1504 aa24.13■■□□□ 1.45
DHFR-205ENST00000511032 AEBP2Q6ZN18 517 aaPredicted RBP23.65■■□□□ 1.38
DHFR-205ENST00000511032 CHIC1Q5VXU3 224 aa22.44■■□□□ 1.18
DHFR-205ENST00000511032 CCDC180Q9P1Z9 1646 aa21.18■□□□□ 0.98
DHFR-205ENST00000511032 ZCCHC6Q5VYS8 1495 aaKnown RBP20.26■□□□□ 0.83
DHFR-205ENST00000511032 SENP3Q9H4L4 574 aaPredicted RBP20.2■□□□□ 0.82
DHFR-205ENST00000511032 DCAF1Q9Y4B6 1507 aa20.03■□□□□ 0.8
DHFR-205ENST00000511032 ABCC9O60706 1549 aa19.95■□□□□ 0.78
DHFR-205ENST00000511032 DCAF8L2P0C7V8 631 aa19.94■□□□□ 0.78
DHFR-205ENST00000511032 PHF23Q9BUL5 403 aaPredicted RBP19.92■□□□□ 0.78
DHFR-205ENST00000511032 MYO15BQ96JP2 1530 aa19.84■□□□□ 0.77
DHFR-205ENST00000511032 NACADO15069 1562 aa19.73■□□□□ 0.75
DHFR-205ENST00000511032 RB1CC1Q8TDY2 1594 aa19.59■□□□□ 0.73
DHFR-205ENST00000511032 SHROOM4Q9ULL8 1493 aa19.55■□□□□ 0.72
DHFR-205ENST00000511032 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
DHFR-205ENST00000511032 UNC13AQ9UPW8 1703 aa19.07■□□□□ 0.64
DHFR-205ENST00000511032 BICRAQ9NZM4 1560 aa18.84■□□□□ 0.61
DHFR-205ENST00000511032 SUPT5HO00267 1087 aaKnown RBP18.83■□□□□ 0.6
DHFR-205ENST00000511032 FOXD1Q16676 465 aa18.81■□□□□ 0.6
DHFR-205ENST00000511032 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.591e-6■■■■■ 27.9
DHFR-205ENST00000511032 BAZ1AQ9NRL2 1556 aaPredicted RBP18.71■□□□□ 0.59
DHFR-205ENST00000511032 CECR2Q9BXF3 1484 aa18.66■□□□□ 0.58
DHFR-205ENST00000511032 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
DHFR-205ENST00000511032 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
DHFR-205ENST00000511032 SMARCA4P51532 1647 aa18.58■□□□□ 0.57
DHFR-205ENST00000511032 WIZO95785 1651 aa18.45■□□□□ 0.54
DHFR-205ENST00000511032 PEG3Q9GZU2 1588 aa18.37■□□□□ 0.53
DHFR-205ENST00000511032 SMARCA2P51531 1590 aa18.35■□□□□ 0.53
DHFR-205ENST00000511032 EIF4G1Q04637 1599 aaKnown RBP18.35■□□□□ 0.53
DHFR-205ENST00000511032 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.52
DHFR-205ENST00000511032 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
DHFR-205ENST00000511032 BAZ1BQ9UIG0 1483 aaKnown RBP18.22■□□□□ 0.51
DHFR-205ENST00000511032 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
DHFR-205ENST00000511032 NCAPD3P42695 1498 aa18.14■□□□□ 0.49
DHFR-205ENST00000511032 CC2D2AQ9P2K1 1620 aa18.08■□□□□ 0.49
DHFR-205ENST00000511032 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
DHFR-205ENST00000511032 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
DHFR-205ENST00000511032 PLPPR3Q6T4P5 718 aa17.92■□□□□ 0.46
DHFR-205ENST00000511032 TRIM41Q8WV44 630 aa17.79■□□□□ 0.44
DHFR-205ENST00000511032 PRDM2Q13029 1718 aa17.72■□□□□ 0.43
DHFR-205ENST00000511032 CFTRP13569 1480 aa17.72■□□□□ 0.43
DHFR-205ENST00000511032 CADPSQ9ULU8 1353 aa17.67■□□□□ 0.42
DHFR-205ENST00000511032 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
DHFR-205ENST00000511032 MSH5O43196 834 aa17.64■□□□□ 0.41
DHFR-205ENST00000511032 WRNQ14191 1432 aaPredicted RBP eCLIP17.63■□□□□ 0.41
DHFR-205ENST00000511032 LAMC3Q9Y6N6 1575 aa17.61■□□□□ 0.41
DHFR-205ENST00000511032 PIAS4Q8N2W9 510 aaPredicted RBP17.56■□□□□ 0.4
DHFR-205ENST00000511032 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
DHFR-205ENST00000511032 SYNJ1O43426 1573 aa17.49■□□□□ 0.39
DHFR-205ENST00000511032 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
DHFR-205ENST00000511032 BIVM-ERCC5R4GMW8 1640 aa17.49■□□□□ 0.39
DHFR-205ENST00000511032 ADRA2BP18089 450 aa17.49■□□□□ 0.39
DHFR-205ENST00000511032 FANCD2Q9BXW9 1451 aa17.48■□□□□ 0.39
DHFR-205ENST00000511032 PDS5BQ9NTI5 1447 aa17.48■□□□□ 0.39
DHFR-205ENST00000511032 EEA1Q15075 1411 aa17.45■□□□□ 0.38
DHFR-205ENST00000511032 NESP48681 1621 aa17.44■□□□□ 0.38
DHFR-205ENST00000511032 CEP164Q9UPV0 1460 aa17.43■□□□□ 0.38
DHFR-205ENST00000511032 CUX1P39880 1505 aa17.4■□□□□ 0.38
DHFR-205ENST00000511032 FAM9AQ8IZU1 332 aaPredicted RBP17.37■□□□□ 0.37
DHFR-205ENST00000511032 POTEDQ86YR6 584 aa17.35■□□□□ 0.37
DHFR-205ENST00000511032 DNMBPQ6XZF7 1577 aa17.35■□□□□ 0.37
DHFR-205ENST00000511032 KIF21AQ7Z4S6 1674 aa17.31■□□□□ 0.36
DHFR-205ENST00000511032 SOGA1O94964 1423 aa17.29■□□□□ 0.36
DHFR-205ENST00000511032 TOPBP1Q92547 1522 aa17.27■□□□□ 0.36
DHFR-205ENST00000511032 FGD5Q6ZNL6 1462 aa17.26■□□□□ 0.35
DHFR-205ENST00000511032 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
DHFR-205ENST00000511032 KIF27Q86VH2 1401 aa17.24■□□□□ 0.35
DHFR-205ENST00000511032 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
DHFR-205ENST00000511032 LOC105371045A0A1W2PR82 267 aa17.22■□□□□ 0.35
DHFR-205ENST00000511032 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
DHFR-205ENST00000511032 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.35
DHFR-205ENST00000511032 RUSC2Q8N2Y8 1516 aa17.18■□□□□ 0.34
DHFR-205ENST00000511032 DNAJC5Q9H3Z4 198 aa17.18■□□□□ 0.34
DHFR-205ENST00000511032 POLA1P09884 1462 aaPredicted RBP17.17■□□□□ 0.34
DHFR-205ENST00000511032 CUX2O14529 1486 aa17.16■□□□□ 0.34
DHFR-205ENST00000511032 KIF21BO75037 1637 aa17.15■□□□□ 0.34
DHFR-205ENST00000511032 GOLGA3Q08378 1498 aa17.15■□□□□ 0.34
DHFR-205ENST00000511032 ABCA10Q8WWZ4 1543 aa17.13■□□□□ 0.33
DHFR-205ENST00000511032 WDR62O43379 1518 aa17.11■□□□□ 0.33
DHFR-205ENST00000511032 EHMT2Q96KQ7 1210 aa17.07■□□□□ 0.32
DHFR-205ENST00000511032 ERICH3Q5RHP9 1530 aa17.07■□□□□ 0.32
DHFR-205ENST00000511032 RAD54L2Q9Y4B4 1467 aa17.07■□□□□ 0.32
DHFR-205ENST00000511032 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
DHFR-205ENST00000511032 UBTFP17480 764 aaKnown RBP17.05■□□□□ 0.32
DHFR-205ENST00000511032 TNIKQ9UKE5 1360 aa17.04■□□□□ 0.32
DHFR-205ENST00000511032 THOC2Q8NI27 1593 aaKnown RBP17.04■□□□□ 0.32
DHFR-205ENST00000511032 PRXQ9BXM0 1461 aa17.02■□□□□ 0.32
DHFR-205ENST00000511032 IFT140Q96RY7 1462 aa17.01■□□□□ 0.31
DHFR-205ENST00000511032 TARBP1Q13395 1621 aaKnown RBP17■□□□□ 0.31
DHFR-205ENST00000511032 CUL7Q14999 1698 aa17■□□□□ 0.31
DHFR-205ENST00000511032 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
DHFR-205ENST00000511032 IGF1RP08069 1367 aa16.98■□□□□ 0.31
DHFR-205ENST00000511032 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
DHFR-205ENST00000511032 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
DHFR-205ENST00000511032 CARMIL1Q5VZK9 1371 aa16.95■□□□□ 0.3
DHFR-205ENST00000511032 CEP162Q5TB80 1403 aa16.92■□□□□ 0.3
DHFR-205ENST00000511032 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
DHFR-205ENST00000511032 PBRM1Q86U86 1689 aa16.9■□□□□ 0.3
DHFR-205ENST00000511032 GRIN2BQ13224 1484 aa16.87■□□□□ 0.29
DHFR-205ENST00000511032 CLIP1P30622 1438 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms