RNA–Protein interactions for RNA: ENST00000419338.5

DDX39B-206, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-206ENST00000419338 NISCHQ9Y2I1 1504 aa35.79■■■■□ 3.32
DDX39B-206ENST00000419338 ABCC9O60706 1549 aa32.57■■■□□ 2.8
DDX39B-206ENST00000419338 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
DDX39B-206ENST00000419338 RB1CC1Q8TDY2 1594 aa30.94■■■□□ 2.54
DDX39B-206ENST00000419338 DNAJC5BQ9UF47 199 aa30.86■■■□□ 2.53
DDX39B-206ENST00000419338 NACADO15069 1562 aa30.66■■■□□ 2.5
DDX39B-206ENST00000419338 DCAF8L2P0C7V8 631 aa30.25■■■□□ 2.43
DDX39B-206ENST00000419338 PABPN1Q86U42 306 aaKnown RBP eCLIP30.23■■■□□ 2.43
DDX39B-206ENST00000419338 UNC13AQ9UPW8 1703 aa30.18■■■□□ 2.42
DDX39B-206ENST00000419338 MYO15BQ96JP2 1530 aa30.17■■■□□ 2.42
DDX39B-206ENST00000419338 BICRAQ9NZM4 1560 aa30.01■■■□□ 2.39
DDX39B-206ENST00000419338 SHROOM4Q9ULL8 1493 aa29.71■■■□□ 2.35
DDX39B-206ENST00000419338 DCAF1Q9Y4B6 1507 aa29.62■■■□□ 2.33
DDX39B-206ENST00000419338 ZCCHC6Q5VYS8 1495 aaKnown RBP29.6■■■□□ 2.33
DDX39B-206ENST00000419338 CC2D2AQ9P2K1 1620 aa29.45■■■□□ 2.31
DDX39B-206ENST00000419338 CECR2Q9BXF3 1484 aa29.43■■■□□ 2.3
DDX39B-206ENST00000419338 SCRIBQ14160 1630 aa29.33■■■□□ 2.29
DDX39B-206ENST00000419338 EIF4G1Q04637 1599 aaKnown RBP29.32■■■□□ 2.28
DDX39B-206ENST00000419338 DNAJC5Q9H3Z4 198 aa28.7■■■□□ 2.18
DDX39B-206ENST00000419338 CUX2O14529 1486 aa28.35■■■□□ 2.13
DDX39B-206ENST00000419338 NCAPD3P42695 1498 aa28.3■■■□□ 2.12
DDX39B-206ENST00000419338 ERCC6Q03468 1493 aa28.2■■■□□ 2.1
DDX39B-206ENST00000419338 ATAD2BQ9ULI0 1458 aa28.13■■■□□ 2.09
DDX39B-206ENST00000419338 HMGXB3Q12766 1538 aa28.07■■■□□ 2.08
DDX39B-206ENST00000419338 SMARCA2P51531 1590 aa28.07■■■□□ 2.08
DDX39B-206ENST00000419338 SMARCA4P51532 1647 aa28■■■□□ 2.07
DDX39B-206ENST00000419338 NESP48681 1621 aa27.87■■■□□ 2.05
DDX39B-206ENST00000419338 BAZ1AQ9NRL2 1556 aaPredicted RBP27.84■■■□□ 2.05
DDX39B-206ENST00000419338 BAZ1BQ9UIG0 1483 aaKnown RBP27.83■■■□□ 2.04
DDX39B-206ENST00000419338 PEG3Q9GZU2 1588 aa27.78■■■□□ 2.04
DDX39B-206ENST00000419338 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
DDX39B-206ENST00000419338 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
DDX39B-206ENST00000419338 PDS5BQ9NTI5 1447 aa27.58■■■□□ 2
DDX39B-206ENST00000419338 MROH2BQ7Z745 1585 aa27.53■■■□□ 2
DDX39B-206ENST00000419338 KIF21AQ7Z4S6 1674 aa27.52■■■□□ 2
DDX39B-206ENST00000419338 CADPSQ9ULU8 1353 aa27.4■■□□□ 1.98
DDX39B-206ENST00000419338 MRC2Q9UBG0 1479 aa27.33■■□□□ 1.97
DDX39B-206ENST00000419338 WDR62O43379 1518 aa27.29■■□□□ 1.96
DDX39B-206ENST00000419338 TRIM41Q8WV44 630 aa27.19■■□□□ 1.94
DDX39B-206ENST00000419338 WIZO95785 1651 aa27.17■■□□□ 1.94
DDX39B-206ENST00000419338 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
DDX39B-206ENST00000419338 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
DDX39B-206ENST00000419338 CFTRP13569 1480 aa27.01■■□□□ 1.91
DDX39B-206ENST00000419338 OSCARQ8IYS5 282 aa26.94■■□□□ 1.9
DDX39B-206ENST00000419338 TOP2AP11388 1531 aaKnown RBP26.86■■□□□ 1.89
DDX39B-206ENST00000419338 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
DDX39B-206ENST00000419338 RSF1Q96T23 1441 aaPredicted RBP26.84■■□□□ 1.89
DDX39B-206ENST00000419338 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
DDX39B-206ENST00000419338 IFT140Q96RY7 1462 aa26.64■■□□□ 1.86
DDX39B-206ENST00000419338 RIMBP3CA6NJZ7 1639 aa26.61■■□□□ 1.85
DDX39B-206ENST00000419338 RIMBP3BA6NNM3 1639 aa26.61■■□□□ 1.85
DDX39B-206ENST00000419338 RIMBP3Q9UFD9 1639 aa26.61■■□□□ 1.85
DDX39B-206ENST00000419338 ZNF608Q9ULD9 1512 aaPredicted RBP26.56■■□□□ 1.84
DDX39B-206ENST00000419338 CCDC88BA6NC98 1476 aa26.53■■□□□ 1.84
DDX39B-206ENST00000419338 TOPBP1Q92547 1522 aa26.51■■□□□ 1.83
DDX39B-206ENST00000419338 ABCC8Q09428 1581 aa26.5■■□□□ 1.83
DDX39B-206ENST00000419338 ARHGEF11O15085 1522 aa26.5■■□□□ 1.83
DDX39B-206ENST00000419338 EIF4G3O43432 1585 aaKnown RBP26.43■■□□□ 1.82
DDX39B-206ENST00000419338 DNMBPQ6XZF7 1577 aa26.4■■□□□ 1.82
DDX39B-206ENST00000419338 TARBP1Q13395 1621 aaKnown RBP26.32■■□□□ 1.8
DDX39B-206ENST00000419338 CHD1O14646 1710 aa26.28■■□□□ 1.8
DDX39B-206ENST00000419338 CYB5RLQ6IPT4 315 aa26.28■■□□□ 1.8
DDX39B-206ENST00000419338 AQRO60306 1485 aaKnown RBP eCLIP26.27■■□□□ 1.85e-9■■■■■ 33.3
DDX39B-206ENST00000419338 POLA1P09884 1462 aaPredicted RBP26.22■■□□□ 1.79
DDX39B-206ENST00000419338 ARAP1Q96P48 1450 aa26.2■■□□□ 1.78
DDX39B-206ENST00000419338 FBLN2P98095 1184 aa26.14■■□□□ 1.78
DDX39B-206ENST00000419338 WDR97A6NE52 1622 aa26.12■■□□□ 1.77
DDX39B-206ENST00000419338 TRHP20396 242 aaPredicted RBP26.1■■□□□ 1.77
DDX39B-206ENST00000419338 SOGA1O94964 1423 aa26.08■■□□□ 1.77
DDX39B-206ENST00000419338 RAD54L2Q9Y4B4 1467 aa26.08■■□□□ 1.77
DDX39B-206ENST00000419338 TDRD9Q8NDG6 1382 aaKnown RBP26.04■■□□□ 1.76
DDX39B-206ENST00000419338 SNAPC4Q5SXM2 1469 aa26.02■■□□□ 1.76
DDX39B-206ENST00000419338 CLASP1Q7Z460 1538 aa26.02■■□□□ 1.76
DDX39B-206ENST00000419338 MAGI1Q96QZ7 1491 aaPredicted RBP25.99■■□□□ 1.75
DDX39B-206ENST00000419338 SYNJ1O43426 1573 aa25.99■■□□□ 1.75
DDX39B-206ENST00000419338 FGD5Q6ZNL6 1462 aa25.98■■□□□ 1.75
DDX39B-206ENST00000419338 CHMP7Q8WUX9 453 aaPredicted RBP25.95■■□□□ 1.74
DDX39B-206ENST00000419338 GRIN2BQ13224 1484 aa25.93■■□□□ 1.74
DDX39B-206ENST00000419338 CUX1P39880 1505 aa25.9■■□□□ 1.74
DDX39B-206ENST00000419338 SYNJ2O15056 1496 aa25.89■■□□□ 1.73
DDX39B-206ENST00000419338 GAPVD1Q14C86 1478 aa25.78■■□□□ 1.72
DDX39B-206ENST00000419338 PBRM1Q86U86 1689 aa25.77■■□□□ 1.72
DDX39B-206ENST00000419338 ABCA10Q8WWZ4 1543 aa25.72■■□□□ 1.71
DDX39B-206ENST00000419338 ABCA5Q8WWZ7 1642 aa25.7■■□□□ 1.7
DDX39B-206ENST00000419338 AEBP2Q6ZN18 517 aaPredicted RBP25.64■■□□□ 1.7
DDX39B-206ENST00000419338 GRIN2AQ12879 1464 aa25.59■■□□□ 1.69
DDX39B-206ENST00000419338 NUP160Q12769 1436 aa25.54■■□□□ 1.68
DDX39B-206ENST00000419338 WRNQ14191 1432 aaPredicted RBP eCLIP25.53■■□□□ 1.68
DDX39B-206ENST00000419338 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
DDX39B-206ENST00000419338 ERCC6L2Q5T890 1561 aa25.51■■□□□ 1.67
DDX39B-206ENST00000419338 CEP170Q5SW79 1584 aa25.5■■□□□ 1.67
DDX39B-206ENST00000419338 SHROOM2Q13796 1616 aa25.46■■□□□ 1.67
DDX39B-206ENST00000419338 FHAD1B1AJZ9 1412 aa25.46■■□□□ 1.67
DDX39B-206ENST00000419338 BIVM-ERCC5R4GMW8 1640 aa25.43■■□□□ 1.66
DDX39B-206ENST00000419338 TOP2BQ02880 1626 aa25.42■■□□□ 1.66
DDX39B-206ENST00000419338 ERICH3Q5RHP9 1530 aa25.4■■□□□ 1.66
DDX39B-206ENST00000419338 KIF13AQ9H1H9 1805 aa25.29■■□□□ 1.64
DDX39B-206ENST00000419338 PRG4Q92954 1404 aaPredicted RBP25.28■■□□□ 1.64
DDX39B-206ENST00000419338 SUPT5HO00267 1087 aaKnown RBP25.27■■□□□ 1.64
DDX39B-206ENST00000419338 JPH4Q96JJ6 628 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms