RNA–Protein interactions for RNA: ENST00000555349.5

SRSF5-209, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 4 BASIC

Gene SRSF5, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-209ENST00000555349 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
SRSF5-209ENST00000555349 CHIC1Q5VXU3 224 aa17.77■□□□□ 0.44
SRSF5-209ENST00000555349 NISCHQ9Y2I1 1504 aa16.81■□□□□ 0.28
SRSF5-209ENST00000555349 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
SRSF5-209ENST00000555349 PHF23Q9BUL5 403 aaPredicted RBP15.85■□□□□ 0.13
SRSF5-209ENST00000555349 ABCC9O60706 1549 aa15.38■□□□□ 0.05
SRSF5-209ENST00000555349 CCDC180Q9P1Z9 1646 aa15.18■□□□□ 0.02
SRSF5-209ENST00000555349 FOXD1Q16676 465 aa15□□□□□ -0.01
SRSF5-209ENST00000555349 DNAJC5BQ9UF47 199 aa14.7□□□□□ -0.06
SRSF5-209ENST00000555349 RB1CC1Q8TDY2 1594 aa14.58□□□□□ -0.08
SRSF5-209ENST00000555349 NACADO15069 1562 aa14.44□□□□□ -0.1
SRSF5-209ENST00000555349 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
SRSF5-209ENST00000555349 DCAF8L2P0C7V8 631 aa14.25□□□□□ -0.13
SRSF5-209ENST00000555349 MYO15BQ96JP2 1530 aa14.21□□□□□ -0.13
SRSF5-209ENST00000555349 UNC13AQ9UPW8 1703 aa14.2□□□□□ -0.14
SRSF5-209ENST00000555349 BICRAQ9NZM4 1560 aa14.16□□□□□ -0.14
SRSF5-209ENST00000555349 PLPPR3Q6T4P5 718 aa14.1□□□□□ -0.15
SRSF5-209ENST00000555349 MSH5O43196 834 aa14.05□□□□□ -0.16
SRSF5-209ENST00000555349 SHROOM4Q9ULL8 1493 aa14.01□□□□□ -0.17
SRSF5-209ENST00000555349 POTEDQ86YR6 584 aa13.96□□□□□ -0.17
SRSF5-209ENST00000555349 PPP6R1Q9UPN7 881 aa13.96□□□□□ -0.17
SRSF5-209ENST00000555349 DCAF1Q9Y4B6 1507 aa13.92□□□□□ -0.18
SRSF5-209ENST00000555349 CECR2Q9BXF3 1484 aa13.92□□□□□ -0.18
SRSF5-209ENST00000555349 PIAS4Q8N2W9 510 aaPredicted RBP13.91□□□□□ -0.18
SRSF5-209ENST00000555349 CC2D2AQ9P2K1 1620 aa13.9□□□□□ -0.18
SRSF5-209ENST00000555349 ZCCHC6Q5VYS8 1495 aaKnown RBP13.87□□□□□ -0.19
SRSF5-209ENST00000555349 ADRA2BP18089 450 aa13.85□□□□□ -0.19
SRSF5-209ENST00000555349 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.2
SRSF5-209ENST00000555349 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
SRSF5-209ENST00000555349 DNAJC5Q9H3Z4 198 aa13.73□□□□□ -0.21
SRSF5-209ENST00000555349 CUX2O14529 1486 aa13.42□□□□□ -0.26
SRSF5-209ENST00000555349 NCAPD3P42695 1498 aa13.36□□□□□ -0.27
SRSF5-209ENST00000555349 ERCC6Q03468 1493 aa13.31□□□□□ -0.28
SRSF5-209ENST00000555349 ATAD2BQ9ULI0 1458 aa13.25□□□□□ -0.29
SRSF5-209ENST00000555349 HMGXB3Q12766 1538 aa13.2□□□□□ -0.3
SRSF5-209ENST00000555349 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
SRSF5-209ENST00000555349 NESP48681 1621 aa13.15□□□□□ -0.3
SRSF5-209ENST00000555349 SMARCA4P51532 1647 aa13.14□□□□□ -0.31
SRSF5-209ENST00000555349 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
SRSF5-209ENST00000555349 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
SRSF5-209ENST00000555349 BAZ1AQ9NRL2 1556 aaPredicted RBP13.07□□□□□ -0.32
SRSF5-209ENST00000555349 LAMC3Q9Y6N6 1575 aa13.07□□□□□ -0.32
SRSF5-209ENST00000555349 PEG3Q9GZU2 1588 aa13.06□□□□□ -0.32
SRSF5-209ENST00000555349 PDS5BQ9NTI5 1447 aa13.02□□□□□ -0.33
SRSF5-209ENST00000555349 KIF21AQ7Z4S6 1674 aa12.95□□□□□ -0.34
SRSF5-209ENST00000555349 TRIM41Q8WV44 630 aa12.93□□□□□ -0.34
SRSF5-209ENST00000555349 MROH2BQ7Z745 1585 aa12.93□□□□□ -0.34
SRSF5-209ENST00000555349 CADPSQ9ULU8 1353 aa12.93□□□□□ -0.34
SRSF5-209ENST00000555349 MRC2Q9UBG0 1479 aa12.88□□□□□ -0.35
SRSF5-209ENST00000555349 WDR62O43379 1518 aa12.86□□□□□ -0.35
SRSF5-209ENST00000555349 OSCARQ8IYS5 282 aa12.79□□□□□ -0.36
SRSF5-209ENST00000555349 MAPK8IP2Q13387 824 aaPredicted RBP12.78□□□□□ -0.36
SRSF5-209ENST00000555349 CEP164Q9UPV0 1460 aa12.78□□□□□ -0.36
SRSF5-209ENST00000555349 FANCD2Q9BXW9 1451 aa12.74□□□□□ -0.37
SRSF5-209ENST00000555349 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
SRSF5-209ENST00000555349 WIZO95785 1651 aa12.73□□□□□ -0.37
SRSF5-209ENST00000555349 CFTRP13569 1480 aa12.72□□□□□ -0.37
SRSF5-209ENST00000555349 URB2Q14146 1524 aaKnown RBP12.65□□□□□ -0.38
SRSF5-209ENST00000555349 SCAF1Q9H7N4 1312 aaKnown RBP12.64□□□□□ -0.39
SRSF5-209ENST00000555349 RSF1Q96T23 1441 aaPredicted RBP12.6□□□□□ -0.39
SRSF5-209ENST00000555349 TOP2AP11388 1531 aaKnown RBP12.58□□□□□ -0.4
SRSF5-209ENST00000555349 RIMBP3CA6NJZ7 1639 aa12.58□□□□□ -0.4
SRSF5-209ENST00000555349 RIMBP3BA6NNM3 1639 aa12.58□□□□□ -0.4
SRSF5-209ENST00000555349 RIMBP3Q9UFD9 1639 aa12.58□□□□□ -0.4
SRSF5-209ENST00000555349 IFT140Q96RY7 1462 aa12.56□□□□□ -0.4
SRSF5-209ENST00000555349 ARHGEF11O15085 1522 aa12.53□□□□□ -0.4
SRSF5-209ENST00000555349 ZNF608Q9ULD9 1512 aaPredicted RBP12.52□□□□□ -0.4
SRSF5-209ENST00000555349 PRDM2Q13029 1718 aa12.51□□□□□ -0.41
SRSF5-209ENST00000555349 ABCC8Q09428 1581 aa12.48□□□□□ -0.41
SRSF5-209ENST00000555349 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
SRSF5-209ENST00000555349 CYB5RLQ6IPT4 315 aa12.46□□□□□ -0.41
SRSF5-209ENST00000555349 CCDC88BA6NC98 1476 aa12.46□□□□□ -0.42
SRSF5-209ENST00000555349 EIF4G3O43432 1585 aaKnown RBP12.42□□□□□ -0.42
SRSF5-209ENST00000555349 DNMBPQ6XZF7 1577 aa12.4□□□□□ -0.42
SRSF5-209ENST00000555349 TRHP20396 242 aaPredicted RBP12.39□□□□□ -0.43
SRSF5-209ENST00000555349 AQRO60306 1485 aaKnown RBP eCLIP12.39□□□□□ -0.435e-8■■■■■ 32.3
SRSF5-209ENST00000555349 ARAP1Q96P48 1450 aa12.39□□□□□ -0.43
SRSF5-209ENST00000555349 TARBP1Q13395 1621 aaKnown RBP12.38□□□□□ -0.43
SRSF5-209ENST00000555349 CHD1O14646 1710 aa12.37□□□□□ -0.43
SRSF5-209ENST00000555349 PPP4R3CPQ6ZMV5 832 aa12.35□□□□□ -0.43
SRSF5-209ENST00000555349 FBLN2P98095 1184 aa12.34□□□□□ -0.43
SRSF5-209ENST00000555349 POLA1P09884 1462 aaPredicted RBP12.33□□□□□ -0.44
SRSF5-209ENST00000555349 SOGA1O94964 1423 aa12.28□□□□□ -0.44
SRSF5-209ENST00000555349 WDR97A6NE52 1622 aa12.28□□□□□ -0.44
SRSF5-209ENST00000555349 TDRD9Q8NDG6 1382 aaKnown RBP12.28□□□□□ -0.44
SRSF5-209ENST00000555349 RAD54L2Q9Y4B4 1467 aa12.27□□□□□ -0.44
SRSF5-209ENST00000555349 CLASP1Q7Z460 1538 aa12.27□□□□□ -0.45
SRSF5-209ENST00000555349 HOXD11P31277 338 aaPredicted RBP12.25□□□□□ -0.45
SRSF5-209ENST00000555349 CHMP7Q8WUX9 453 aaPredicted RBP12.25□□□□□ -0.45
SRSF5-209ENST00000555349 SNAPC4Q5SXM2 1469 aa12.24□□□□□ -0.45
SRSF5-209ENST00000555349 MAGI1Q96QZ7 1491 aaPredicted RBP12.24□□□□□ -0.45
SRSF5-209ENST00000555349 SYNJ1O43426 1573 aa12.23□□□□□ -0.45
SRSF5-209ENST00000555349 GRIN2BQ13224 1484 aa12.21□□□□□ -0.46
SRSF5-209ENST00000555349 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.46
SRSF5-209ENST00000555349 SYNJ2O15056 1496 aa12.2□□□□□ -0.46
SRSF5-209ENST00000555349 CUX1P39880 1505 aa12.16□□□□□ -0.46
SRSF5-209ENST00000555349 GAPVD1Q14C86 1478 aa12.15□□□□□ -0.46
SRSF5-209ENST00000555349 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
SRSF5-209ENST00000555349 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
SRSF5-209ENST00000555349 RNF216Q9NWF9 866 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms