RNA–Protein interactions for RNA: ENST00000367667.5

RFWD2-203, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best)

Gene RFWD2, Length 2,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-203ENST00000367667 NISCHQ9Y2I1 1504 aa25.63■■□□□ 1.69
RFWD2-203ENST00000367667 CCDC180Q9P1Z9 1646 aa22.66■■□□□ 1.22
RFWD2-203ENST00000367667 ABCC9O60706 1549 aa22.02■■□□□ 1.12
RFWD2-203ENST00000367667 ZCCHC6Q5VYS8 1495 aaKnown RBP21.41■■□□□ 1.02
RFWD2-203ENST00000367667 DCAF8L2P0C7V8 631 aa21.4■■□□□ 1.02
RFWD2-203ENST00000367667 NACADO15069 1562 aa21.2■□□□□ 0.98
RFWD2-203ENST00000367667 RB1CC1Q8TDY2 1594 aa21.19■□□□□ 0.98
RFWD2-203ENST00000367667 DCAF1Q9Y4B6 1507 aa21.12■□□□□ 0.97
RFWD2-203ENST00000367667 MYO15BQ96JP2 1530 aa21.08■□□□□ 0.97
RFWD2-203ENST00000367667 UNC13AQ9UPW8 1703 aa20.9■□□□□ 0.94
RFWD2-203ENST00000367667 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
RFWD2-203ENST00000367667 PABPN1Q86U42 306 aaKnown RBP eCLIP20.64■□□□□ 0.89
RFWD2-203ENST00000367667 BICRAQ9NZM4 1560 aa20.63■□□□□ 0.89
RFWD2-203ENST00000367667 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
RFWD2-203ENST00000367667 EIF4G1Q04637 1599 aaKnown RBP20.03■□□□□ 0.8
RFWD2-203ENST00000367667 CECR2Q9BXF3 1484 aa20.02■□□□□ 0.8
RFWD2-203ENST00000367667 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
RFWD2-203ENST00000367667 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
RFWD2-203ENST00000367667 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
RFWD2-203ENST00000367667 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.76
RFWD2-203ENST00000367667 BAZ1AQ9NRL2 1556 aaPredicted RBP19.82■□□□□ 0.76
RFWD2-203ENST00000367667 WIZO95785 1651 aa19.68■□□□□ 0.74
RFWD2-203ENST00000367667 ATAD2BQ9ULI0 1458 aa19.65■□□□□ 0.74
RFWD2-203ENST00000367667 RSF1Q96T23 1441 aaPredicted RBP19.64■□□□□ 0.74
RFWD2-203ENST00000367667 SMARCA2P51531 1590 aa19.61■□□□□ 0.73
RFWD2-203ENST00000367667 PEG3Q9GZU2 1588 aa19.6■□□□□ 0.73
RFWD2-203ENST00000367667 NCAPD3P42695 1498 aa19.55■□□□□ 0.72
RFWD2-203ENST00000367667 BAZ1BQ9UIG0 1483 aaKnown RBP19.51■□□□□ 0.71
RFWD2-203ENST00000367667 HMGXB3Q12766 1538 aa19.5■□□□□ 0.71
RFWD2-203ENST00000367667 SUPT5HO00267 1087 aaKnown RBP19.43■□□□□ 0.7
RFWD2-203ENST00000367667 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
RFWD2-203ENST00000367667 CCDC88BA6NC98 1476 aa19.17■□□□□ 0.66
RFWD2-203ENST00000367667 NESP48681 1621 aa19.16■□□□□ 0.66
RFWD2-203ENST00000367667 LAMC3Q9Y6N6 1575 aa19.02■□□□□ 0.64
RFWD2-203ENST00000367667 CADPSQ9ULU8 1353 aa19.01■□□□□ 0.63
RFWD2-203ENST00000367667 KIF21AQ7Z4S6 1674 aa18.97■□□□□ 0.63
RFWD2-203ENST00000367667 CFTRP13569 1480 aa18.97■□□□□ 0.63
RFWD2-203ENST00000367667 PRDM2Q13029 1718 aa18.95■□□□□ 0.62
RFWD2-203ENST00000367667 ERCC6Q03468 1493 aa18.9■□□□□ 0.62
RFWD2-203ENST00000367667 PDS5BQ9NTI5 1447 aa18.85■□□□□ 0.61
RFWD2-203ENST00000367667 FANCD2Q9BXW9 1451 aa18.84■□□□□ 0.61
RFWD2-203ENST00000367667 CEP164Q9UPV0 1460 aa18.78■□□□□ 0.6
RFWD2-203ENST00000367667 THOC2Q8NI27 1593 aaKnown RBP18.77■□□□□ 0.59
RFWD2-203ENST00000367667 MRC2Q9UBG0 1479 aa18.69■□□□□ 0.58
RFWD2-203ENST00000367667 URB2Q14146 1524 aaKnown RBP18.68■□□□□ 0.58
RFWD2-203ENST00000367667 ABCC8Q09428 1581 aa18.64■□□□□ 0.58
RFWD2-203ENST00000367667 WDR62O43379 1518 aa18.63■□□□□ 0.57
RFWD2-203ENST00000367667 TOPBP1Q92547 1522 aa18.58■□□□□ 0.57
RFWD2-203ENST00000367667 CUX1P39880 1505 aa18.58■□□□□ 0.56
RFWD2-203ENST00000367667 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
RFWD2-203ENST00000367667 SYNJ1O43426 1573 aa18.53■□□□□ 0.56
RFWD2-203ENST00000367667 CUX2O14529 1486 aa18.52■□□□□ 0.56
RFWD2-203ENST00000367667 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
RFWD2-203ENST00000367667 BIVM-ERCC5R4GMW8 1640 aa18.46■□□□□ 0.55
RFWD2-203ENST00000367667 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
RFWD2-203ENST00000367667 FGD5Q6ZNL6 1462 aa18.45■□□□□ 0.54
RFWD2-203ENST00000367667 POLA1P09884 1462 aaPredicted RBP18.44■□□□□ 0.54
RFWD2-203ENST00000367667 RAD54L2Q9Y4B4 1467 aa18.41■□□□□ 0.54
RFWD2-203ENST00000367667 TARBP1Q13395 1621 aaKnown RBP18.39■□□□□ 0.53
RFWD2-203ENST00000367667 ZNF608Q9ULD9 1512 aaPredicted RBP18.35■□□□□ 0.53
RFWD2-203ENST00000367667 SOGA1O94964 1423 aa18.35■□□□□ 0.53
RFWD2-203ENST00000367667 IFT140Q96RY7 1462 aa18.34■□□□□ 0.53
RFWD2-203ENST00000367667 WDR97A6NE52 1622 aa18.32■□□□□ 0.52
RFWD2-203ENST00000367667 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
RFWD2-203ENST00000367667 AQRO60306 1485 aaKnown RBP eCLIP18.27■□□□□ 0.511e-7■■■■□ 21.1
RFWD2-203ENST00000367667 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
RFWD2-203ENST00000367667 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
RFWD2-203ENST00000367667 ABCA10Q8WWZ4 1543 aa18.23■□□□□ 0.51
RFWD2-203ENST00000367667 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
RFWD2-203ENST00000367667 ABCA5Q8WWZ7 1642 aa18.19■□□□□ 0.5
RFWD2-203ENST00000367667 PBRM1Q86U86 1689 aa18.18■□□□□ 0.5
RFWD2-203ENST00000367667 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
RFWD2-203ENST00000367667 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
RFWD2-203ENST00000367667 SNAPC4Q5SXM2 1469 aa18.08■□□□□ 0.48
RFWD2-203ENST00000367667 GRIN2BQ13224 1484 aa18.07■□□□□ 0.48
RFWD2-203ENST00000367667 CHD1O14646 1710 aa18.06■□□□□ 0.48
RFWD2-203ENST00000367667 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
RFWD2-203ENST00000367667 ERICH3Q5RHP9 1530 aa18■□□□□ 0.47
RFWD2-203ENST00000367667 ADAMTS12P58397 1594 aa18■□□□□ 0.47
RFWD2-203ENST00000367667 FBLN2P98095 1184 aa17.99■□□□□ 0.47
RFWD2-203ENST00000367667 FAM9AQ8IZU1 332 aaPredicted RBP17.99■□□□□ 0.47
RFWD2-203ENST00000367667 MAGI1Q96QZ7 1491 aaPredicted RBP17.99■□□□□ 0.47
RFWD2-203ENST00000367667 IGF1RP08069 1367 aa17.98■□□□□ 0.47
RFWD2-203ENST00000367667 SYNJ2O15056 1496 aa17.94■□□□□ 0.46
RFWD2-203ENST00000367667 CUL7Q14999 1698 aa17.92■□□□□ 0.46
RFWD2-203ENST00000367667 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
RFWD2-203ENST00000367667 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
RFWD2-203ENST00000367667 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
RFWD2-203ENST00000367667 CARMIL1Q5VZK9 1371 aa17.87■□□□□ 0.45
RFWD2-203ENST00000367667 CEP170Q5SW79 1584 aa17.84■□□□□ 0.45
RFWD2-203ENST00000367667 CSRNP3Q8WYN3 585 aa17.84■□□□□ 0.45
RFWD2-203ENST00000367667 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
RFWD2-203ENST00000367667 EHMT2Q96KQ7 1210 aa17.82■□□□□ 0.44
RFWD2-203ENST00000367667 EEA1Q15075 1411 aa17.81■□□□□ 0.44
RFWD2-203ENST00000367667 PRXQ9BXM0 1461 aa17.8■□□□□ 0.44
RFWD2-203ENST00000367667 RAPGEF2Q9Y4G8 1499 aa17.79■□□□□ 0.44
RFWD2-203ENST00000367667 CLASP1Q7Z460 1538 aa17.76■□□□□ 0.43
RFWD2-203ENST00000367667 NUP160Q12769 1436 aa17.76■□□□□ 0.43
RFWD2-203ENST00000367667 KIF21BO75037 1637 aa17.72■□□□□ 0.43
RFWD2-203ENST00000367667 CTTNBP2Q8WZ74 1663 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms