RNA–Protein interactions for RNA: ENST00000375635.6

C6orf48-202, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-202ENST00000375635 NISCHQ9Y2I1 1504 aa32.48■■■□□ 2.79
C6orf48-202ENST00000375635 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.21
C6orf48-202ENST00000375635 ABCC9O60706 1549 aa28.14■■■□□ 2.1
C6orf48-202ENST00000375635 NACADO15069 1562 aa27.09■■□□□ 1.93
C6orf48-202ENST00000375635 ZCCHC6Q5VYS8 1495 aaKnown RBP27.08■■□□□ 1.93
C6orf48-202ENST00000375635 RB1CC1Q8TDY2 1594 aa27.07■■□□□ 1.92
C6orf48-202ENST00000375635 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
C6orf48-202ENST00000375635 MYO15BQ96JP2 1530 aa26.98■■□□□ 1.91
C6orf48-202ENST00000375635 DCAF1Q9Y4B6 1507 aa26.89■■□□□ 1.89
C6orf48-202ENST00000375635 UNC13AQ9UPW8 1703 aa26.53■■□□□ 1.84
C6orf48-202ENST00000375635 BICRAQ9NZM4 1560 aa26.36■■□□□ 1.81
C6orf48-202ENST00000375635 PABPN1Q86U42 306 aaKnown RBP eCLIP26.31■■□□□ 1.8
C6orf48-202ENST00000375635 SCRIBQ14160 1630 aa26.28■■□□□ 1.8
C6orf48-202ENST00000375635 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
C6orf48-202ENST00000375635 DNAJC5BQ9UF47 199 aa25.87■■□□□ 1.73
C6orf48-202ENST00000375635 EIF4G1Q04637 1599 aaKnown RBP25.6■■□□□ 1.69
C6orf48-202ENST00000375635 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
C6orf48-202ENST00000375635 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
C6orf48-202ENST00000375635 SMARCA4P51532 1647 aa25.19■■□□□ 1.62
C6orf48-202ENST00000375635 BAZ1AQ9NRL2 1556 aaPredicted RBP25.13■■□□□ 1.61
C6orf48-202ENST00000375635 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
C6orf48-202ENST00000375635 ATAD2BQ9ULI0 1458 aa25.04■■□□□ 1.6
C6orf48-202ENST00000375635 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
C6orf48-202ENST00000375635 SMARCA2P51531 1590 aa24.97■■□□□ 1.59
C6orf48-202ENST00000375635 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
C6orf48-202ENST00000375635 HMGXB3Q12766 1538 aa24.88■■□□□ 1.57
C6orf48-202ENST00000375635 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
C6orf48-202ENST00000375635 BAZ1BQ9UIG0 1483 aaKnown RBP24.78■■□□□ 1.56
C6orf48-202ENST00000375635 WIZO95785 1651 aa24.77■■□□□ 1.56
C6orf48-202ENST00000375635 TOP2AP11388 1531 aaKnown RBP24.49■■□□□ 1.51
C6orf48-202ENST00000375635 NESP48681 1621 aa24.41■■□□□ 1.5
C6orf48-202ENST00000375635 LAMC3Q9Y6N6 1575 aa24.31■■□□□ 1.48
C6orf48-202ENST00000375635 CADPSQ9ULU8 1353 aa24.27■■□□□ 1.48
C6orf48-202ENST00000375635 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
C6orf48-202ENST00000375635 ERCC6Q03468 1493 aa24.19■■□□□ 1.46
C6orf48-202ENST00000375635 CFTRP13569 1480 aa24.16■■□□□ 1.46
C6orf48-202ENST00000375635 PDS5BQ9NTI5 1447 aa24.11■■□□□ 1.45
C6orf48-202ENST00000375635 SUPT5HO00267 1087 aaKnown RBP24.11■■□□□ 1.45
C6orf48-202ENST00000375635 KIF21AQ7Z4S6 1674 aa24.1■■□□□ 1.45
C6orf48-202ENST00000375635 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
C6orf48-202ENST00000375635 FANCD2Q9BXW9 1451 aa23.98■■□□□ 1.43
C6orf48-202ENST00000375635 CUX2O14529 1486 aa23.96■■□□□ 1.43
C6orf48-202ENST00000375635 PRDM2Q13029 1718 aa23.96■■□□□ 1.43
C6orf48-202ENST00000375635 CEP164Q9UPV0 1460 aa23.93■■□□□ 1.42
C6orf48-202ENST00000375635 MRC2Q9UBG0 1479 aa23.89■■□□□ 1.42
C6orf48-202ENST00000375635 WDR62O43379 1518 aa23.84■■□□□ 1.41
C6orf48-202ENST00000375635 URB2Q14146 1524 aaKnown RBP23.78■■□□□ 1.4
C6orf48-202ENST00000375635 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
C6orf48-202ENST00000375635 DNMBPQ6XZF7 1577 aa23.59■■□□□ 1.37
C6orf48-202ENST00000375635 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
C6orf48-202ENST00000375635 CUX1P39880 1505 aa23.49■■□□□ 1.35
C6orf48-202ENST00000375635 POLA1P09884 1462 aaPredicted RBP23.43■■□□□ 1.34
C6orf48-202ENST00000375635 IFT140Q96RY7 1462 aa23.43■■□□□ 1.34
C6orf48-202ENST00000375635 TARBP1Q13395 1621 aaKnown RBP23.4■■□□□ 1.34
C6orf48-202ENST00000375635 FGD5Q6ZNL6 1462 aa23.37■■□□□ 1.33
C6orf48-202ENST00000375635 ZNF608Q9ULD9 1512 aaPredicted RBP23.37■■□□□ 1.33
C6orf48-202ENST00000375635 DNAJC5Q9H3Z4 198 aa23.36■■□□□ 1.33
C6orf48-202ENST00000375635 RAD54L2Q9Y4B4 1467 aa23.33■■□□□ 1.33
C6orf48-202ENST00000375635 WRNQ14191 1432 aaPredicted RBP eCLIP23.32■■□□□ 1.325e-10■□□□□ 9.6
C6orf48-202ENST00000375635 SOGA1O94964 1423 aa23.31■■□□□ 1.32
C6orf48-202ENST00000375635 SYNJ1O43426 1573 aa23.3■■□□□ 1.32
C6orf48-202ENST00000375635 BIVM-ERCC5R4GMW8 1640 aa23.29■■□□□ 1.32
C6orf48-202ENST00000375635 TOP2BQ02880 1626 aa23.28■■□□□ 1.32
C6orf48-202ENST00000375635 EIF4G3O43432 1585 aaKnown RBP23.25■■□□□ 1.31
C6orf48-202ENST00000375635 AQRO60306 1485 aaKnown RBP eCLIP23.23■■□□□ 1.312e-13■■■■■ 92.3
C6orf48-202ENST00000375635 WDR97A6NE52 1622 aa23.21■■□□□ 1.31
C6orf48-202ENST00000375635 TDRD9Q8NDG6 1382 aaKnown RBP23.18■■□□□ 1.3
C6orf48-202ENST00000375635 ABCA10Q8WWZ4 1543 aa23.16■■□□□ 1.3
C6orf48-202ENST00000375635 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.28
C6orf48-202ENST00000375635 GAPVD1Q14C86 1478 aa23.04■■□□□ 1.28
C6orf48-202ENST00000375635 GRIN2BQ13224 1484 aa23.02■■□□□ 1.28
C6orf48-202ENST00000375635 SNAPC4Q5SXM2 1469 aa22.99■■□□□ 1.27
C6orf48-202ENST00000375635 PBRM1Q86U86 1689 aa22.99■■□□□ 1.27
C6orf48-202ENST00000375635 MAGI1Q96QZ7 1491 aaPredicted RBP22.96■■□□□ 1.27
C6orf48-202ENST00000375635 OSCARQ8IYS5 282 aa22.95■■□□□ 1.26
C6orf48-202ENST00000375635 CHD1O14646 1710 aa22.94■■□□□ 1.26
C6orf48-202ENST00000375635 SYNJ2O15056 1496 aa22.88■■□□□ 1.25
C6orf48-202ENST00000375635 ERICH3Q5RHP9 1530 aa22.86■■□□□ 1.25
C6orf48-202ENST00000375635 FBLN2P98095 1184 aa22.84■■□□□ 1.25
C6orf48-202ENST00000375635 ADAMTS12P58397 1594 aa22.83■■□□□ 1.25
C6orf48-202ENST00000375635 KIF27Q86VH2 1401 aa22.81■■□□□ 1.24
C6orf48-202ENST00000375635 CHMP7Q8WUX9 453 aaPredicted RBP22.8■■□□□ 1.24
C6orf48-202ENST00000375635 FHAD1B1AJZ9 1412 aa22.77■■□□□ 1.24
C6orf48-202ENST00000375635 IGF1RP08069 1367 aa22.76■■□□□ 1.23
C6orf48-202ENST00000375635 TRIM41Q8WV44 630 aa22.75■■□□□ 1.23
C6orf48-202ENST00000375635 GRIN2AQ12879 1464 aa22.74■■□□□ 1.23
C6orf48-202ENST00000375635 CLASP1Q7Z460 1538 aa22.73■■□□□ 1.23
C6orf48-202ENST00000375635 RUSC2Q8N2Y8 1516 aa22.71■■□□□ 1.23
C6orf48-202ENST00000375635 NUP160Q12769 1436 aa22.67■■□□□ 1.22
C6orf48-202ENST00000375635 CEP170Q5SW79 1584 aa22.66■■□□□ 1.22
C6orf48-202ENST00000375635 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
C6orf48-202ENST00000375635 CUL7Q14999 1698 aa22.64■■□□□ 1.21
C6orf48-202ENST00000375635 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
C6orf48-202ENST00000375635 RIMBP3CA6NJZ7 1639 aa22.62■■□□□ 1.21
C6orf48-202ENST00000375635 RIMBP3BA6NNM3 1639 aa22.62■■□□□ 1.21
C6orf48-202ENST00000375635 RIMBP3Q9UFD9 1639 aa22.62■■□□□ 1.21
C6orf48-202ENST00000375635 CHIC1Q5VXU3 224 aa22.6■■□□□ 1.21
C6orf48-202ENST00000375635 CARMIL1Q5VZK9 1371 aa22.59■■□□□ 1.21
C6orf48-202ENST00000375635 SHROOM2Q13796 1616 aa22.5■■□□□ 1.19
C6orf48-202ENST00000375635 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms