RNA–Protein interactions for RNA: ENST00000315251.10

CHDH-201, Transcript of choline dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHDH, Length 7,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHDH-201ENST00000315251 DCAF8L2P0C7V8 631 aa25.87■■□□□ 1.73
CHDH-201ENST00000315251 SUPT5HO00267 1087 aaKnown RBP24.39■■□□□ 1.5
CHDH-201ENST00000315251 EHMT2Q96KQ7 1210 aa24.35■■□□□ 1.49
CHDH-201ENST00000315251 PELP1Q8IZL8 1130 aaKnown RBP24.27■■□□□ 1.48
CHDH-201ENST00000315251 SHROOM4Q9ULL8 1493 aa23.74■■□□□ 1.39
CHDH-201ENST00000315251 APLP2Q06481 763 aa23.63■■□□□ 1.37
CHDH-201ENST00000315251 ERICH6Q7L0X2 663 aa23.55■■□□□ 1.36
CHDH-201ENST00000315251 TTBK1Q5TCY1 1321 aaPredicted RBP23.54■■□□□ 1.36
CHDH-201ENST00000315251 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
CHDH-201ENST00000315251 CCER1Q8TC90 406 aaPredicted RBP23.21■■□□□ 1.31
CHDH-201ENST00000315251 PCGF6Q9BYE7 350 aa23.18■■□□□ 1.3
CHDH-201ENST00000315251 RANGAP1P46060 587 aaPredicted RBP23.14■■□□□ 1.29
CHDH-201ENST00000315251 CENPBP07199 599 aaPredicted RBP23.02■■□□□ 1.28
CHDH-201ENST00000315251 ATP1B4Q9UN42 357 aaPredicted RBP22.98■■□□□ 1.27
CHDH-201ENST00000315251 YTHDC1Q96MU7 727 aaKnown RBP22.78■■□□□ 1.24
CHDH-201ENST00000315251 MYT1Q01538 1121 aa22.77■■□□□ 1.24
CHDH-201ENST00000315251 NEFLP07196 543 aa22.76■■□□□ 1.23
CHDH-201ENST00000315251 ZEB1P37275 1124 aaPredicted RBP22.53■■□□□ 1.2
CHDH-201ENST00000315251 NISCHQ9Y2I1 1504 aa22.47■■□□□ 1.19
CHDH-201ENST00000315251 UBTFP17480 764 aaKnown RBP22.43■■□□□ 1.18
CHDH-201ENST00000315251 DAXXQ9UER7 740 aaPredicted RBP22.43■■□□□ 1.18
CHDH-201ENST00000315251 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
CHDH-201ENST00000315251 PPARGC1BQ86YN6 1023 aaKnown RBP22.31■■□□□ 1.16
CHDH-201ENST00000315251 POLR3GLQ9BT43 218 aa22.31■■□□□ 1.16
CHDH-201ENST00000315251 MYT1LQ9UL68 1186 aa22.22■■□□□ 1.15
CHDH-201ENST00000315251 CNGB1Q14028 1251 aaPredicted RBP22.22■■□□□ 1.15
CHDH-201ENST00000315251 CHIC1Q5VXU3 224 aa22.08■■□□□ 1.13
CHDH-201ENST00000315251 ITGAEP38570 1179 aa22.06■■□□□ 1.12
CHDH-201ENST00000315251 SLC4A1APQ9BWU0 796 aaKnown RBP21.99■■□□□ 1.11
CHDH-201ENST00000315251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.97■■□□□ 1.11
CHDH-201ENST00000315251 HNRNPUL2Q1KMD3 747 aaKnown RBP21.97■■□□□ 1.11
CHDH-201ENST00000315251 ZNF316A6NFI3 1004 aaPredicted RBP21.87■■□□□ 1.09
CHDH-201ENST00000315251 CLSPNQ9HAW4 1339 aa21.85■■□□□ 1.09
CHDH-201ENST00000315251 RTL5Q5HYW3 569 aaPredicted RBP21.77■■□□□ 1.08
CHDH-201ENST00000315251 TRIM26Q12899 539 aaPredicted RBP21.67■■□□□ 1.06
CHDH-201ENST00000315251 HRCP23327 699 aa21.65■■□□□ 1.06
CHDH-201ENST00000315251 BCL11AQ9H165 835 aa21.49■■□□□ 1.03
CHDH-201ENST00000315251 SLC24A1O60721 1099 aa21.39■■□□□ 1.02
CHDH-201ENST00000315251 BCANQ96GW7 911 aa21.38■■□□□ 1.01
CHDH-201ENST00000315251 LOC105371045A0A1W2PR82 267 aa21.36■■□□□ 1.01
CHDH-201ENST00000315251 ZBTB47Q9UFB7 747 aaPredicted RBP21.33■■□□□ 1
CHDH-201ENST00000315251 DIEXFQ68CQ4 756 aaKnown RBP21.31■■□□□ 1
CHDH-201ENST00000315251 FAM50AQ14320 339 aaKnown RBP21.27■■□□□ 1
CHDH-201ENST00000315251 TRIM52Q96A61 297 aa21.24■□□□□ 0.99
CHDH-201ENST00000315251 NEUROD1Q13562 356 aa21.23■□□□□ 0.99
CHDH-201ENST00000315251 ZNF326Q5BKZ1 582 aaKnown RBP21.19■□□□□ 0.98
CHDH-201ENST00000315251 CANXP27824 592 aaKnown RBP21.13■□□□□ 0.97
CHDH-201ENST00000315251 CDK11AQ9UQ88 783 aaPredicted RBP21.12■□□□□ 0.97
CHDH-201ENST00000315251 GTF3C3Q9Y5Q9 886 aa21.01■□□□□ 0.95
CHDH-201ENST00000315251 ANP32CO43423 234 aa21.01■□□□□ 0.95
CHDH-201ENST00000315251 NPM2Q86SE8 214 aaKnown RBP20.93■□□□□ 0.94
CHDH-201ENST00000315251 EIF5BO60841 1220 aaKnown RBP20.91■□□□□ 0.94
CHDH-201ENST00000315251 NEFMP07197 916 aa20.91■□□□□ 0.94
CHDH-201ENST00000315251 ANP32AP39687 249 aaKnown RBP20.84■□□□□ 0.93
CHDH-201ENST00000315251 HSP90AA1P07900 732 aaKnown RBP20.77■□□□□ 0.92
CHDH-201ENST00000315251 FBLN2P98095 1184 aa20.77■□□□□ 0.92
CHDH-201ENST00000315251 ANP32BQ92688 251 aaKnown RBP20.77■□□□□ 0.92
CHDH-201ENST00000315251 ARID3CA6NKF2 412 aa20.68■□□□□ 0.9
CHDH-201ENST00000315251 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
CHDH-201ENST00000315251 ARXQ96QS3 562 aa20.63■□□□□ 0.89
CHDH-201ENST00000315251 ZNF777Q9ULD5 760 aaPredicted RBP20.52■□□□□ 0.88
CHDH-201ENST00000315251 SALL2Q9Y467 1007 aaPredicted RBP20.52■□□□□ 0.88
CHDH-201ENST00000315251 UPF2Q9HAU5 1272 aaKnown RBP20.52■□□□□ 0.88
CHDH-201ENST00000315251 P3H3Q8IVL6 736 aa20.52■□□□□ 0.87
CHDH-201ENST00000315251 NBR1Q14596 966 aa20.48■□□□□ 0.87
CHDH-201ENST00000315251 FKBP8Q14318 412 aa20.48■□□□□ 0.87
CHDH-201ENST00000315251 CHGAP10645 457 aaKnown RBP20.47■□□□□ 0.87
CHDH-201ENST00000315251 GLIPR1L2Q4G1C9 344 aa20.45■□□□□ 0.86
CHDH-201ENST00000315251 ESF1Q9H501 851 aaKnown RBP20.45■□□□□ 0.86
CHDH-201ENST00000315251 STAG3Q9UJ98 1225 aa20.44■□□□□ 0.86
CHDH-201ENST00000315251 PABPN1Q86U42 306 aaKnown RBP eCLIP20.42■□□□□ 0.861e-6■■■□□ 16.7
CHDH-201ENST00000315251 FAM9BQ8IZU0 186 aa20.39■□□□□ 0.85
CHDH-201ENST00000315251 ACIN1Q9UKV3 1341 aaKnown RBP20.39■□□□□ 0.85
CHDH-201ENST00000315251 A0A0G2JS52 829 aa20.36■□□□□ 0.85
CHDH-201ENST00000315251 CDK11BP21127 795 aaKnown RBP20.36■□□□□ 0.85
CHDH-201ENST00000315251 HNRNPUQ00839 825 aaKnown RBP eCLIP20.35■□□□□ 0.85
CHDH-201ENST00000315251 SCAF1Q9H7N4 1312 aaKnown RBP20.34■□□□□ 0.85
CHDH-201ENST00000315251 PLEKHG5O94827 1062 aa20.25■□□□□ 0.83
CHDH-201ENST00000315251 CCDC136Q96JN2 1154 aa20.24■□□□□ 0.83
CHDH-201ENST00000315251 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.23■□□□□ 0.83
CHDH-201ENST00000315251 DDX10Q13206 875 aaKnown RBP20.2■□□□□ 0.82
CHDH-201ENST00000315251 TONSLQ96HA7 1378 aa20.19■□□□□ 0.82
CHDH-201ENST00000315251 TMC1Q8TDI8 760 aa20.18■□□□□ 0.82
CHDH-201ENST00000315251 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
CHDH-201ENST00000315251 TULP1O00294 542 aaPredicted RBP20.16■□□□□ 0.82
CHDH-201ENST00000315251 ZBTB7CA1YPR0 619 aa20.15■□□□□ 0.82
CHDH-201ENST00000315251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.15■□□□□ 0.823e-7■■□□□ 12.1
CHDH-201ENST00000315251 WDR43Q15061 677 aaKnown RBP eCLIP20.14■□□□□ 0.81
CHDH-201ENST00000315251 IRX6P78412 446 aaPredicted RBP20.13■□□□□ 0.81
CHDH-201ENST00000315251 TPRNQ4KMQ1 711 aa20.11■□□□□ 0.81
CHDH-201ENST00000315251 MYH16Q9H6N6 1097 aa20.1■□□□□ 0.81
CHDH-201ENST00000315251 KDM2AQ9Y2K7 1162 aa20.06■□□□□ 0.8
CHDH-201ENST00000315251 TRIM44Q96DX7 344 aaPredicted RBP20.04■□□□□ 0.8
CHDH-201ENST00000315251 C14orf37Q86TY3 774 aa20.03■□□□□ 0.8
CHDH-201ENST00000315251 ABCC9O60706 1549 aa20.03■□□□□ 0.8
CHDH-201ENST00000315251 CHIC2Q9UKJ5 165 aa20.01■□□□□ 0.79
CHDH-201ENST00000315251 NCLP19338 710 aaKnown RBP20.01■□□□□ 0.79
CHDH-201ENST00000315251 MRS2Q9HD23 443 aa19.98■□□□□ 0.79
CHDH-201ENST00000315251 NPM1P06748 294 aaKnown RBP eCLIP19.95■□□□□ 0.78
CHDH-201ENST00000315251 TAOK2Q9UL54 1235 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms