RNA–Protein interactions for RNA: ENST00000584912.5

RPL23-211, Transcript of ribosomal protein L23, humanhuman

TSL 1 (best)

Gene RPL23, Length 2,779 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23-211ENST00000584912 CHIC1Q5VXU3 224 aa17.15■□□□□ 0.34
RPL23-211ENST00000584912 NISCHQ9Y2I1 1504 aa17.06■□□□□ 0.32
RPL23-211ENST00000584912 AEBP2Q6ZN18 517 aaPredicted RBP16.89■□□□□ 0.29
RPL23-211ENST00000584912 PELP1Q8IZL8 1130 aaKnown RBP15.73■□□□□ 0.11
RPL23-211ENST00000584912 HRCP23327 699 aa15.68■□□□□ 0.1
RPL23-211ENST00000584912 PHF23Q9BUL5 403 aaPredicted RBP15.52■□□□□ 0.08
RPL23-211ENST00000584912 MYT1Q01538 1121 aa15.31■□□□□ 0.04
RPL23-211ENST00000584912 DCAF1Q9Y4B6 1507 aa15.12■□□□□ 0.01
RPL23-211ENST00000584912 MYO15BQ96JP2 1530 aa15.08■□□□□ 0
RPL23-211ENST00000584912 CCDC180Q9P1Z9 1646 aa15.01□□□□□ -0.01
RPL23-211ENST00000584912 PPARGC1BQ86YN6 1023 aaKnown RBP14.93□□□□□ -0.02
RPL23-211ENST00000584912 PCGF6Q9BYE7 350 aa14.89□□□□□ -0.03
RPL23-211ENST00000584912 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
RPL23-211ENST00000584912 ZEB1P37275 1124 aaPredicted RBP14.81□□□□□ -0.04
RPL23-211ENST00000584912 TRIM26Q12899 539 aaPredicted RBP14.68□□□□□ -0.06
RPL23-211ENST00000584912 ZCCHC6Q5VYS8 1495 aaKnown RBP14.64□□□□□ -0.07
RPL23-211ENST00000584912 EHMT2Q96KQ7 1210 aa14.64□□□□□ -0.07
RPL23-211ENST00000584912 SUPT5HO00267 1087 aaKnown RBP14.59□□□□□ -0.07
RPL23-211ENST00000584912 TTBK1Q5TCY1 1321 aaPredicted RBP14.57□□□□□ -0.08
RPL23-211ENST00000584912 SHROOM4Q9ULL8 1493 aa14.54□□□□□ -0.08
RPL23-211ENST00000584912 ACIN1Q9UKV3 1341 aaKnown RBP14.49□□□□□ -0.09
RPL23-211ENST00000584912 PLPPR3Q6T4P5 718 aa14.29□□□□□ -0.12
RPL23-211ENST00000584912 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
RPL23-211ENST00000584912 CENPBP07199 599 aaPredicted RBP14.26□□□□□ -0.13
RPL23-211ENST00000584912 LOC105371045A0A1W2PR82 267 aa14.2□□□□□ -0.14
RPL23-211ENST00000584912 GTF3C3Q9Y5Q9 886 aa14.2□□□□□ -0.14
RPL23-211ENST00000584912 KCNA4P22459 653 aa14.08□□□□□ -0.16
RPL23-211ENST00000584912 CLSPNQ9HAW4 1339 aa14□□□□□ -0.17
RPL23-211ENST00000584912 DIEXFQ68CQ4 756 aaKnown RBP14□□□□□ -0.17
RPL23-211ENST00000584912 ABCC9O60706 1549 aa13.99□□□□□ -0.17
RPL23-211ENST00000584912 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
RPL23-211ENST00000584912 ADRA2BP18089 450 aa13.94□□□□□ -0.18
RPL23-211ENST00000584912 BCL11AQ9H165 835 aa13.86□□□□□ -0.19
RPL23-211ENST00000584912 WRNQ14191 1432 aaPredicted RBP eCLIP13.83□□□□□ -0.2
RPL23-211ENST00000584912 ANP32EQ9BTT0 268 aa13.82□□□□□ -0.2
RPL23-211ENST00000584912 RB1CC1Q8TDY2 1594 aa13.8□□□□□ -0.2
RPL23-211ENST00000584912 ZNF316A6NFI3 1004 aaPredicted RBP13.78□□□□□ -0.2
RPL23-211ENST00000584912 CCER1Q8TC90 406 aaPredicted RBP13.76□□□□□ -0.21
RPL23-211ENST00000584912 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
RPL23-211ENST00000584912 FAM9AQ8IZU1 332 aaPredicted RBP13.71□□□□□ -0.22
RPL23-211ENST00000584912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.7□□□□□ -0.22
RPL23-211ENST00000584912 RSF1Q96T23 1441 aaPredicted RBP13.69□□□□□ -0.22
RPL23-211ENST00000584912 SENP3Q9H4L4 574 aaPredicted RBP13.66□□□□□ -0.22
RPL23-211ENST00000584912 SLC24A1O60721 1099 aa13.65□□□□□ -0.22
RPL23-211ENST00000584912 TSHZ2Q9NRE2 1034 aa13.61□□□□□ -0.23
RPL23-211ENST00000584912 EIF4G1Q04637 1599 aaKnown RBP13.6□□□□□ -0.23
RPL23-211ENST00000584912 SUPT16HQ9Y5B9 1047 aaKnown RBP13.59□□□□□ -0.23
RPL23-211ENST00000584912 MIER1Q8N108 512 aa13.57□□□□□ -0.24
RPL23-211ENST00000584912 PRKCSHP14314 528 aaPredicted RBP13.49□□□□□ -0.25
RPL23-211ENST00000584912 PPP6R1Q9UPN7 881 aa13.49□□□□□ -0.25
RPL23-211ENST00000584912 ERICH6Q7L0X2 663 aa13.45□□□□□ -0.26
RPL23-211ENST00000584912 YTHDC1Q96MU7 727 aaKnown RBP13.45□□□□□ -0.26
RPL23-211ENST00000584912 TNIKQ9UKE5 1360 aa13.43□□□□□ -0.26
RPL23-211ENST00000584912 CEP162Q5TB80 1403 aa13.4□□□□□ -0.26
RPL23-211ENST00000584912 EEA1Q15075 1411 aa13.39□□□□□ -0.27
RPL23-211ENST00000584912 SLC4A1APQ9BWU0 796 aaKnown RBP13.38□□□□□ -0.27
RPL23-211ENST00000584912 MYT1LQ9UL68 1186 aa13.37□□□□□ -0.27
RPL23-211ENST00000584912 BAZ1AQ9NRL2 1556 aaPredicted RBP13.34□□□□□ -0.27
RPL23-211ENST00000584912 APLP2Q06481 763 aa13.34□□□□□ -0.27
RPL23-211ENST00000584912 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
RPL23-211ENST00000584912 FANCIQ9NVI1 1328 aa13.25□□□□□ -0.29
RPL23-211ENST00000584912 SCRIBQ14160 1630 aa13.24□□□□□ -0.29
RPL23-211ENST00000584912 DCAF8L2P0C7V8 631 aa13.23□□□□□ -0.29
RPL23-211ENST00000584912 RBM19Q9Y4C8 960 aaKnown RBP13.23□□□□□ -0.29
RPL23-211ENST00000584912 NACADO15069 1562 aa13.22□□□□□ -0.29
RPL23-211ENST00000584912 GOLGA3Q08378 1498 aa13.21□□□□□ -0.3
RPL23-211ENST00000584912 KIF21BO75037 1637 aa13.21□□□□□ -0.3
RPL23-211ENST00000584912 MROH2BQ7Z745 1585 aa13.2□□□□□ -0.3
RPL23-211ENST00000584912 CUX2O14529 1486 aa13.19□□□□□ -0.3
RPL23-211ENST00000584912 WIZO95785 1651 aa13.19□□□□□ -0.3
RPL23-211ENST00000584912 DHX57Q6P158 1386 aaKnown RBP13.15□□□□□ -0.3
RPL23-211ENST00000584912 CCDC88BA6NC98 1476 aa13.13□□□□□ -0.31
RPL23-211ENST00000584912 MSH5O43196 834 aa13.13□□□□□ -0.31
RPL23-211ENST00000584912 ERICH6BQ5W0A0 696 aa13.13□□□□□ -0.31
RPL23-211ENST00000584912 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
RPL23-211ENST00000584912 BAZ1BQ9UIG0 1483 aaKnown RBP13.12□□□□□ -0.31
RPL23-211ENST00000584912 VPS8Q8N3P4 1428 aa13.12□□□□□ -0.31
RPL23-211ENST00000584912 TOP2AP11388 1531 aaKnown RBP13.11□□□□□ -0.31
RPL23-211ENST00000584912 CECR2Q9BXF3 1484 aa13.09□□□□□ -0.31
RPL23-211ENST00000584912 ZBTB22O15209 634 aa13.09□□□□□ -0.31
RPL23-211ENST00000584912 CEP164Q9UPV0 1460 aa13.07□□□□□ -0.32
RPL23-211ENST00000584912 SOGA1O94964 1423 aa13.04□□□□□ -0.32
RPL23-211ENST00000584912 CLIP1P30622 1438 aa13.04□□□□□ -0.32
RPL23-211ENST00000584912 SMARCA2P51531 1590 aa13.03□□□□□ -0.32
RPL23-211ENST00000584912 FKBP8Q14318 412 aa13.03□□□□□ -0.32
RPL23-211ENST00000584912 CCER2I3L3R5 266 aa13.01□□□□□ -0.33
RPL23-211ENST00000584912 RRBP1Q9P2E9 1410 aaKnown RBP13□□□□□ -0.33
RPL23-211ENST00000584912 NEFLP07196 543 aa12.99□□□□□ -0.33
RPL23-211ENST00000584912 DEKP35659 375 aaKnown RBP12.95□□□□□ -0.34
RPL23-211ENST00000584912 HNRNPUL2Q1KMD3 747 aaKnown RBP12.95□□□□□ -0.34
RPL23-211ENST00000584912 RUSC2Q8N2Y8 1516 aa12.94□□□□□ -0.34
RPL23-211ENST00000584912 MAPKBP1O60336 1514 aa12.91□□□□□ -0.34
RPL23-211ENST00000584912 PPP4R3CPQ6ZMV5 832 aa12.91□□□□□ -0.34
RPL23-211ENST00000584912 SYNJ1O43426 1573 aa12.9□□□□□ -0.34
RPL23-211ENST00000584912 FOXD1Q16676 465 aa12.9□□□□□ -0.34
RPL23-211ENST00000584912 UBE2Q2Q8WVN8 375 aa12.89□□□□□ -0.35
RPL23-211ENST00000584912 BCANQ96GW7 911 aa12.89□□□□□ -0.35
RPL23-211ENST00000584912 PPP1R15AO75807 674 aaPredicted RBP12.88□□□□□ -0.35
RPL23-211ENST00000584912 TIMELESSQ9UNS1 1208 aa12.87□□□□□ -0.35
RPL23-211ENST00000584912 CDK11AQ9UQ88 783 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms