RNA–Protein interactions for RNA: ENST00000467802.1

CHDH-202, Transcript of choline dehydrogenase, humanhuman

TSL 2

Gene CHDH, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHDH-202ENST00000467802 NISCHQ9Y2I1 1504 aa47.59■■■■■ 5.21
CHDH-202ENST00000467802 CCDC180Q9P1Z9 1646 aa42.15■■■■■ 4.34
CHDH-202ENST00000467802 ABCC9O60706 1549 aa41.83■■■■■ 4.29
CHDH-202ENST00000467802 DCAF8L2P0C7V8 631 aa40.02■■■■■ 4
CHDH-202ENST00000467802 RB1CC1Q8TDY2 1594 aa39.86■■■■□ 3.97
CHDH-202ENST00000467802 NACADO15069 1562 aa39.83■■■■□ 3.97
CHDH-202ENST00000467802 MYO15BQ96JP2 1530 aa39.59■■■■□ 3.93
CHDH-202ENST00000467802 ZCCHC6Q5VYS8 1495 aaKnown RBP39.58■■■■□ 3.93
CHDH-202ENST00000467802 DNAJC5BQ9UF47 199 aa39.38■■■■□ 3.89
CHDH-202ENST00000467802 DCAF1Q9Y4B6 1507 aa39.36■■■■□ 3.89
CHDH-202ENST00000467802 PABPN1Q86U42 306 aaKnown RBP eCLIP39.04■■■■□ 3.84
CHDH-202ENST00000467802 UNC13AQ9UPW8 1703 aa38.78■■■■□ 3.8
CHDH-202ENST00000467802 BICRAQ9NZM4 1560 aa38.67■■■■□ 3.78
CHDH-202ENST00000467802 SCRIBQ14160 1630 aa38.52■■■■□ 3.76
CHDH-202ENST00000467802 SHROOM4Q9ULL8 1493 aa38.28■■■■□ 3.72
CHDH-202ENST00000467802 CC2D2AQ9P2K1 1620 aa37.74■■■■□ 3.63
CHDH-202ENST00000467802 EIF4G1Q04637 1599 aaKnown RBP37.68■■■■□ 3.62
CHDH-202ENST00000467802 CECR2Q9BXF3 1484 aa37.66■■■■□ 3.62
CHDH-202ENST00000467802 NCAPD3P42695 1498 aa36.86■■■■□ 3.49
CHDH-202ENST00000467802 BAZ1AQ9NRL2 1556 aaPredicted RBP36.86■■■■□ 3.49
CHDH-202ENST00000467802 SMARCA4P51532 1647 aa36.85■■■■□ 3.49
CHDH-202ENST00000467802 ATAD2BQ9ULI0 1458 aa36.82■■■■□ 3.49
CHDH-202ENST00000467802 SMARCA2P51531 1590 aa36.7■■■■□ 3.47
CHDH-202ENST00000467802 MROH2BQ7Z745 1585 aa36.66■■■■□ 3.46
CHDH-202ENST00000467802 PEG3Q9GZU2 1588 aa36.53■■■■□ 3.44
CHDH-202ENST00000467802 HMGXB3Q12766 1538 aa36.52■■■■□ 3.44
CHDH-202ENST00000467802 BAZ1BQ9UIG0 1483 aaKnown RBP36.47■■■■□ 3.43
CHDH-202ENST00000467802 RSF1Q96T23 1441 aaPredicted RBP36.28■■■■□ 3.4
CHDH-202ENST00000467802 WIZO95785 1651 aa36.15■■■■□ 3.38
CHDH-202ENST00000467802 DNAJC5Q9H3Z4 198 aa36.04■■■■□ 3.36
CHDH-202ENST00000467802 ERCC6Q03468 1493 aa36.04■■■■□ 3.36
CHDH-202ENST00000467802 CUX2O14529 1486 aa35.98■■■■□ 3.35
CHDH-202ENST00000467802 NESP48681 1621 aa35.97■■■■□ 3.35
CHDH-202ENST00000467802 TOP2AP11388 1531 aaKnown RBP35.83■■■■□ 3.33
CHDH-202ENST00000467802 CADPSQ9ULU8 1353 aa35.81■■■■□ 3.32
CHDH-202ENST00000467802 LAMC3Q9Y6N6 1575 aa35.76■■■■□ 3.31
CHDH-202ENST00000467802 PDS5BQ9NTI5 1447 aa35.68■■■■□ 3.3
CHDH-202ENST00000467802 THOC2Q8NI27 1593 aaKnown RBP35.51■■■■□ 3.28
CHDH-202ENST00000467802 CCDC88BA6NC98 1476 aa35.51■■■■□ 3.28
CHDH-202ENST00000467802 CFTRP13569 1480 aa35.51■■■■□ 3.28
CHDH-202ENST00000467802 SUPT5HO00267 1087 aaKnown RBP35.37■■■■□ 3.25
CHDH-202ENST00000467802 KIF21AQ7Z4S6 1674 aa35.37■■■■□ 3.25
CHDH-202ENST00000467802 FANCD2Q9BXW9 1451 aa35.31■■■■□ 3.24
CHDH-202ENST00000467802 CEP164Q9UPV0 1460 aa35.25■■■■□ 3.23
CHDH-202ENST00000467802 MRC2Q9UBG0 1479 aa35.22■■■■□ 3.23
CHDH-202ENST00000467802 WDR62O43379 1518 aa35.06■■■■□ 3.2
CHDH-202ENST00000467802 URB2Q14146 1524 aaKnown RBP34.93■■■■□ 3.18
CHDH-202ENST00000467802 PRDM2Q13029 1718 aa34.83■■■■□ 3.17
CHDH-202ENST00000467802 ABCC8Q09428 1581 aa34.75■■■■□ 3.15
CHDH-202ENST00000467802 TOPBP1Q92547 1522 aa34.71■■■■□ 3.15
CHDH-202ENST00000467802 DNMBPQ6XZF7 1577 aa34.6■■■■□ 3.13
CHDH-202ENST00000467802 IFT140Q96RY7 1462 aa34.56■■■■□ 3.12
CHDH-202ENST00000467802 TRIM41Q8WV44 630 aa34.43■■■■□ 3.1
CHDH-202ENST00000467802 POLA1P09884 1462 aaPredicted RBP34.41■■■■□ 3.1
CHDH-202ENST00000467802 OSCARQ8IYS5 282 aa34.41■■■■□ 3.1
CHDH-202ENST00000467802 ZNF608Q9ULD9 1512 aaPredicted RBP34.39■■■■□ 3.1
CHDH-202ENST00000467802 CUX1P39880 1505 aa34.38■■■■□ 3.09
CHDH-202ENST00000467802 SOGA1O94964 1423 aa34.37■■■■□ 3.09
CHDH-202ENST00000467802 FGD5Q6ZNL6 1462 aa34.3■■■■□ 3.08
CHDH-202ENST00000467802 RAD54L2Q9Y4B4 1467 aa34.3■■■■□ 3.08
CHDH-202ENST00000467802 TARBP1Q13395 1621 aaKnown RBP34.25■■■■□ 3.07
CHDH-202ENST00000467802 AQRO60306 1485 aaKnown RBP eCLIP34.24■■■■□ 3.075e-8■■■□□ 17.4
CHDH-202ENST00000467802 WRNQ14191 1432 aaPredicted RBP eCLIP34.21■■■■□ 3.07
CHDH-202ENST00000467802 TDRD9Q8NDG6 1382 aaKnown RBP34.2■■■■□ 3.07
CHDH-202ENST00000467802 EIF4G3O43432 1585 aaKnown RBP34.1■■■■□ 3.05
CHDH-202ENST00000467802 TOP2BQ02880 1626 aa34.01■■■■□ 3.03
CHDH-202ENST00000467802 ABCA10Q8WWZ4 1543 aa33.99■■■■□ 3.03
CHDH-202ENST00000467802 SYNJ1O43426 1573 aa33.98■■■■□ 3.03
CHDH-202ENST00000467802 WDR97A6NE52 1622 aa33.97■■■■□ 3.03
CHDH-202ENST00000467802 FBLN2P98095 1184 aa33.94■■■■□ 3.02
CHDH-202ENST00000467802 BIVM-ERCC5R4GMW8 1640 aa33.93■■■■□ 3.02
CHDH-202ENST00000467802 GRIN2BQ13224 1484 aa33.92■■■■□ 3.02
CHDH-202ENST00000467802 GAPVD1Q14C86 1478 aa33.91■■■■□ 3.02
CHDH-202ENST00000467802 RIMBP3CA6NJZ7 1639 aa33.88■■■■□ 3.01
CHDH-202ENST00000467802 RIMBP3BA6NNM3 1639 aa33.88■■■■□ 3.01
CHDH-202ENST00000467802 RIMBP3Q9UFD9 1639 aa33.88■■■■□ 3.01
CHDH-202ENST00000467802 SNAPC4Q5SXM2 1469 aa33.84■■■■□ 3.01
CHDH-202ENST00000467802 CHMP7Q8WUX9 453 aaPredicted RBP33.84■■■■□ 3.01
CHDH-202ENST00000467802 ARHGEF11O15085 1522 aa33.82■■■■□ 3
CHDH-202ENST00000467802 MAGI1Q96QZ7 1491 aaPredicted RBP33.81■■■■□ 3
CHDH-202ENST00000467802 ABCA5Q8WWZ7 1642 aa33.72■■■□□ 2.99
CHDH-202ENST00000467802 CHD1O14646 1710 aa33.72■■■□□ 2.99
CHDH-202ENST00000467802 SYNJ2O15056 1496 aa33.69■■■□□ 2.98
CHDH-202ENST00000467802 CYB5RLQ6IPT4 315 aa33.64■■■□□ 2.98
CHDH-202ENST00000467802 PBRM1Q86U86 1689 aa33.56■■■□□ 2.96
CHDH-202ENST00000467802 ERICH3Q5RHP9 1530 aa33.55■■■□□ 2.96
CHDH-202ENST00000467802 FHAD1B1AJZ9 1412 aa33.54■■■□□ 2.96
CHDH-202ENST00000467802 KIF27Q86VH2 1401 aa33.53■■■□□ 2.96
CHDH-202ENST00000467802 ARAP1Q96P48 1450 aa33.52■■■□□ 2.96
CHDH-202ENST00000467802 IGF1RP08069 1367 aa33.47■■■□□ 2.95
CHDH-202ENST00000467802 GRIN2AQ12879 1464 aa33.44■■■□□ 2.94
CHDH-202ENST00000467802 CLASP1Q7Z460 1538 aa33.43■■■□□ 2.94
CHDH-202ENST00000467802 ADAMTS12P58397 1594 aa33.43■■■□□ 2.94
CHDH-202ENST00000467802 NUP160Q12769 1436 aa33.34■■■□□ 2.93
CHDH-202ENST00000467802 CARMIL1Q5VZK9 1371 aa33.24■■■□□ 2.91
CHDH-202ENST00000467802 CEP170Q5SW79 1584 aa33.21■■■□□ 2.91
CHDH-202ENST00000467802 TRHP20396 242 aaPredicted RBP33.18■■■□□ 2.9
CHDH-202ENST00000467802 JPH4Q96JJ6 628 aa33.15■■■□□ 2.9
CHDH-202ENST00000467802 RUSC2Q8N2Y8 1516 aa33.13■■■□□ 2.89
CHDH-202ENST00000467802 CUL7Q14999 1698 aa33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms