Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 FAM3C-202ENST00000412653 561 ntTSL 414.81□□□□□ -0.045e-6■□□□□ 9.9
PRPF8Q6P2Q9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.71□□□□□ -0.055e-6■□□□□ 9.9
PRPF8Q6P2Q9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.39□□□□□ -0.115e-6■□□□□ 9.9
PRPF8Q6P2Q9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.195e-6■□□□□ 9.9
PRPF8Q6P2Q9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.245e-6■□□□□ 9.9
PRPF8Q6P2Q9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.265e-6■□□□□ 9.9
PRPF8Q6P2Q9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.325e-6■□□□□ 9.9
PRPF8Q6P2Q9 CHD3-205ENST00000449744 880 ntTSL 213.02□□□□□ -0.335e-6■□□□□ 9.9
PRPF8Q6P2Q9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.395e-6■□□□□ 9.9
PRPF8Q6P2Q9 KCNQ4-202ENST00000443478 2435 ntAPPRIS ALT2 TSL 512.43□□□□□ -0.425e-6■□□□□ 9.9
PRPF8Q6P2Q9 PKNOX1-210ENST00000607049 762 ntTSL 512.22□□□□□ -0.455e-6■□□□□ 9.9
PRPF8Q6P2Q9 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.01□□□□□ -0.495e-6■□□□□ 9.9
PRPF8Q6P2Q9 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.535e-6■□□□□ 9.9
PRPF8Q6P2Q9 PKNOX1-209ENST00000560448 1429 ntTSL 511.71□□□□□ -0.545e-6■□□□□ 9.9
PRPF8Q6P2Q9 CHD3-211ENST00000481999 2515 ntTSL 211.53□□□□□ -0.565e-6■□□□□ 9.9
PRPF8Q6P2Q9 ZNF436-AS1-201ENST00000335648 2547 ntBASIC11.38□□□□□ -0.595e-6■□□□□ 9.9
PRPF8Q6P2Q9 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.23□□□□□ -0.615e-6■□□□□ 9.9
PRPF8Q6P2Q9 CLN8-207ENST00000524258 835 ntTSL 210.11□□□□□ -0.795e-6■□□□□ 9.9
PRPF8Q6P2Q9 KCNQ4-203ENST00000506017 3335 ntTSL 29.89□□□□□ -0.835e-6■□□□□ 9.9
PRPF8Q6P2Q9 DDRGK1-204ENST00000496781 865 ntTSL 1 (best)9.57□□□□□ -0.883e-10■□□□□ 9.9
PRPF8Q6P2Q9 ITGA5-208ENST00000551861 536 ntTSL 49.56□□□□□ -0.885e-6■□□□□ 9.9
PRPF8Q6P2Q9 CHD3-208ENST00000470531 3744 ntTSL 29.23□□□□□ -0.935e-6■□□□□ 9.9
PRPF8Q6P2Q9 CHD3-216ENST00000573936 749 ntTSL 39.21□□□□□ -0.945e-6■□□□□ 9.9
PRPF8Q6P2Q9 PHKA1-203ENST00000373542 6020 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.965e-6■□□□□ 9.9
PRPF8Q6P2Q9 PKNOX1-201ENST00000291547 5003 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.015e-6■□□□□ 9.9
PRPF8Q6P2Q9 PKNOX1-203ENST00000432907 5180 ntTSL 2 BASIC8.42□□□□□ -1.065e-6■□□□□ 9.9
PRPF8Q6P2Q9 NIPAL3-201ENST00000003912 5481 ntTSL 1 (best) BASIC8.26□□□□□ -1.095e-6■□□□□ 9.9
PRPF8Q6P2Q9 CLN8-202ENST00000517514 568 ntTSL 48.2□□□□□ -1.15e-6■□□□□ 9.9
PRPF8Q6P2Q9 HERC2P2-204ENST00000618651 535 ntTSL 57.95□□□□□ -1.143e-10■□□□□ 9.9
PRPF8Q6P2Q9 ANTXR2-201ENST00000307333 1473 ntTSL 1 (best) BASIC7.93□□□□□ -1.145e-6■□□□□ 9.9
PRPF8Q6P2Q9 CLN8-203ENST00000518780 507 ntTSL 37.74□□□□□ -1.175e-6■□□□□ 9.9
PRPF8Q6P2Q9 SMPD4P1-203ENST00000443839 2108 ntTSL 1 (best) BASIC7.71□□□□□ -1.171e-6■□□□□ 9.9
PRPF8Q6P2Q9 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.44□□□□□ -1.385e-6■□□□□ 9.9
PRPF8Q6P2Q9 CENPN-206ENST00000562943 461 ntTSL 26.17□□□□□ -1.425e-6■□□□□ 9.9
PRPF8Q6P2Q9 ANTXR2-205ENST00000449651 2026 ntTSL 26.15□□□□□ -1.435e-6■□□□□ 9.9
PRPF8Q6P2Q9 FAM76B-206ENST00000538047 448 ntTSL 35.6□□□□□ -1.515e-6■□□□□ 9.9
PRPF8Q6P2Q9 ANTXR2-208ENST00000506286 773 ntTSL 35.49□□□□□ -1.535e-6■□□□□ 9.9
PRPF8Q6P2Q9 PMS2P3-207ENST00000529061 717 ntBASIC4.32□□□□□ -1.725e-6■□□□□ 9.9
PRPF8Q6P2Q9 MBOAT2-208ENST00000486315 416 ntTSL 33.67□□□□□ -1.825e-6■□□□□ 9.9
PRPF8Q6P2Q9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.12□□□□□ -2.075e-6■□□□□ 9.9
PRPF8Q6P2Q9 ANTXR2-209ENST00000514959 579 ntTSL 21.51□□□□□ -2.175e-6■□□□□ 9.9
PRPF8Q6P2Q9 ZC3H15-204ENST00000445547 776 ntTSL 20.8□□□□□ -2.285e-6■□□□□ 9.9
PRPF8Q6P2Q9 DCP2-202ENST00000502635 514 ntTSL 50.73□□□□□ -2.295e-6■□□□□ 9.9
PRPF8Q6P2Q9 CWC15-205ENST00000616442 559 ntTSL 20.39□□□□□ -2.355e-6■□□□□ 9.9
PRPF8Q6P2Q9 ICA1-218ENST00000490041 477 ntTSL 2-0.1□□□□□ -2.435e-6■□□□□ 9.9
PRPF8Q6P2Q9 MBOAT2-205ENST00000473432 576 ntTSL 2-2.13□□□□□ -2.755e-6■□□□□ 9.9
PRPF8Q6P2Q9 NDUFS7-206ENST00000535382 3050 ntTSL 211.11□□□□□ -0.633e-7■□□□□ 9.9
PRPF8Q6P2Q9 MTMR4-203ENST00000579921 425 ntTSL 512.67□□□□□ -0.384e-7■□□□□ 9.9
PRPF8Q6P2Q9 MAP4K4-208ENST00000418101 776 ntTSL 38.7□□□□□ -1.024e-14■□□□□ 9.9
PRPF8Q6P2Q9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.282e-6■□□□□ 9.9
PRPF8Q6P2Q9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.32e-6■□□□□ 9.9
PRPF8Q6P2Q9 TRIM50-203ENST00000488217 548 ntTSL 213.1□□□□□ -0.312e-6■□□□□ 9.9
PRPF8Q6P2Q9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.68■□□□□ 0.19e-8■□□□□ 9.9
PRPF8Q6P2Q9 MFGE8-214ENST00000560937 801 ntTSL 215.01□□□□□ -0.019e-8■□□□□ 9.9
PRPF8Q6P2Q9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.96□□□□□ -0.179e-8■□□□□ 9.9
PRPF8Q6P2Q9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.239e-8■□□□□ 9.9
PRPF8Q6P2Q9 MFGE8-205ENST00000558018 1989 ntTSL 213.03□□□□□ -0.329e-8■□□□□ 9.9
PRPF8Q6P2Q9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.389e-8■□□□□ 9.9
PRPF8Q6P2Q9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.362e-10■□□□□ 9.9
PRPF8Q6P2Q9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.042e-10■□□□□ 9.9
PRPF8Q6P2Q9 CRYL1-203ENST00000480748 1035 ntTSL 311.44□□□□□ -0.584e-6■□□□□ 9.9
PRPF8Q6P2Q9 TSEN54-206ENST00000579449 786 ntTSL 211.33□□□□□ -0.62e-10■□□□□ 9.9
PRPF8Q6P2Q9 CCDC84-207ENST00000533787 1140 ntTSL 310.55□□□□□ -0.722e-10■□□□□ 9.9
PRPF8Q6P2Q9 SLC38A10-205ENST00000540233 423 ntTSL 36.49□□□□□ -1.372e-10■□□□□ 9.9
PRPF8Q6P2Q9 CNOT1-221ENST00000569924 493 ntTSL 22.56□□□□□ -22e-10■□□□□ 9.9
PRPF8Q6P2Q9 SLC22A31-204ENST00000568161 651 ntTSL 312.37□□□□□ -0.434e-27■□□□□ 9.9
PRPF8Q6P2Q9 UBE2O-203ENST00000586505 522 ntTSL 58.09□□□□□ -1.113e-8■□□□□ 9.9
PRPF8Q6P2Q9 ZNF385A-208ENST00000549962 572 ntTSL 415.03■□□□□ -01e-6■□□□□ 9.9
PRPF8Q6P2Q9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.43□□□□□ -0.261e-6■□□□□ 9.9
PRPF8Q6P2Q9 ZNF385A-210ENST00000550774 545 ntTSL 413.23□□□□□ -0.291e-6■□□□□ 9.9
PRPF8Q6P2Q9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51e-6■□□□□ 9.9
PRPF8Q6P2Q9 HGS-206ENST00000571647 2401 nt11.45□□□□□ -0.581e-15■□□□□ 9.9
PRPF8Q6P2Q9 MVP-203ENST00000562463 525 ntTSL 414.93□□□□□ -0.021e-6■□□□□ 9.9
PRPF8Q6P2Q9 MVP-207ENST00000563915 854 ntTSL 313.68□□□□□ -0.221e-6■□□□□ 9.9
PRPF8Q6P2Q9 MVP-215ENST00000569612 2091 ntTSL 1 (best)12.32□□□□□ -0.441e-6■□□□□ 9.9
PRPF8Q6P2Q9 MVP-205ENST00000563123 575 ntTSL 49.67□□□□□ -0.861e-6■□□□□ 9.9
PRPF8Q6P2Q9 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.7□□□□□ -1.661e-6■□□□□ 9.9
PRPF8Q6P2Q9 OTUB1-204ENST00000447683 2315 ntTSL 212.47□□□□□ -0.413e-6■□□□□ 9.9
PRPF8Q6P2Q9 OTUB1-207ENST00000536443 553 ntTSL 38.28□□□□□ -1.083e-6■□□□□ 9.9
PRPF8Q6P2Q9 TM7SF2-211ENST00000528026 582 ntTSL 316.37■□□□□ 0.216e-9■□□□□ 9.9
PRPF8Q6P2Q9 TM7SF2-209ENST00000527851 976 ntTSL 314.01□□□□□ -0.176e-9■□□□□ 9.9
PRPF8Q6P2Q9 ERBB3-210ENST00000549472 519 ntTSL 59.42□□□□□ -0.92e-6■□□□□ 9.9
PRPF8Q6P2Q9 MSI2-212ENST00000579590 452 ntTSL 52.91□□□□□ -1.947e-8■□□□□ 9.9
PRPF8Q6P2Q9 MSI2-215ENST00000582453 496 ntTSL 32.28□□□□□ -2.047e-8■□□□□ 9.9
PRPF8Q6P2Q9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.45e-26■□□□□ 9.9
PRPF8Q6P2Q9 HS3ST3B1-202ENST00000466596 2808 ntTSL 211.48□□□□□ -0.575e-26■□□□□ 9.9
PRPF8Q6P2Q9 SGSH-209ENST00000572257 581 ntTSL 49.51□□□□□ -0.891e-6■□□□□ 9.9
PRPF8Q6P2Q9 ACADVL-210ENST00000578269 724 ntTSL 218.69■□□□□ 0.582e-8■□□□□ 9.9
PRPF8Q6P2Q9 ACADVL-223ENST00000580263 545 ntTSL 218.67■□□□□ 0.582e-8■□□□□ 9.9
PRPF8Q6P2Q9 ACADVL-212ENST00000578421 548 ntTSL 318.54■□□□□ 0.562e-8■□□□□ 9.9
PRPF8Q6P2Q9 DHX30-208ENST00000461905 591 ntTSL 216.25■□□□□ 0.191e-6■□□□□ 9.9
PRPF8Q6P2Q9 TKT-205ENST00000460243 615 ntTSL 28.98□□□□□ -0.972e-6■□□□□ 9.9
PRPF8Q6P2Q9 SLC26A11-211ENST00000572652 1519 ntTSL 214.47□□□□□ -0.093e-6■□□□□ 9.9
PRPF8Q6P2Q9 SLC26A11-214ENST00000574967 547 ntTSL 413.29□□□□□ -0.283e-6■□□□□ 9.9
PRPF8Q6P2Q9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.81■□□□□ 0.767e-9■□□□□ 9.9
PRPF8Q6P2Q9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.9■□□□□ 0.467e-9■□□□□ 9.9
PRPF8Q6P2Q9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.51■□□□□ 0.397e-9■□□□□ 9.9
PRPF8Q6P2Q9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.05■□□□□ 0.327e-9■□□□□ 9.9
PRPF8Q6P2Q9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.54■□□□□ 0.247e-9■□□□□ 9.9
PRPF8Q6P2Q9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.28□□□□□ -0.287e-9■□□□□ 9.9
Retrieved 100 of 73,762 protein–RNA pairs in 529.2 ms