RNA–Protein interactions for RNA: ENST00000466596.5

HS3ST3B1-202, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3B1, humanhuman

TSL 2

Gene HS3ST3B1, Length 2,808 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3B1-202ENST00000466596 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.42
HS3ST3B1-202ENST00000466596 SHROOM4Q9ULL8 1493 aa26.38■■□□□ 1.81
HS3ST3B1-202ENST00000466596 SUPT5HO00267 1087 aaKnown RBP25.83■■□□□ 1.73
HS3ST3B1-202ENST00000466596 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
HS3ST3B1-202ENST00000466596 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
HS3ST3B1-202ENST00000466596 CCDC180Q9P1Z9 1646 aa25.38■■□□□ 1.65
HS3ST3B1-202ENST00000466596 HRCP23327 699 aa25.12■■□□□ 1.61
HS3ST3B1-202ENST00000466596 MYO15BQ96JP2 1530 aa25.08■■□□□ 1.61
HS3ST3B1-202ENST00000466596 PCGF6Q9BYE7 350 aa25.01■■□□□ 1.59
HS3ST3B1-202ENST00000466596 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
HS3ST3B1-202ENST00000466596 PPARGC1BQ86YN6 1023 aaKnown RBP24.94■■□□□ 1.58
HS3ST3B1-202ENST00000466596 LOC105371045A0A1W2PR82 267 aa24.6■■□□□ 1.53
HS3ST3B1-202ENST00000466596 DCAF1Q9Y4B6 1507 aa24.47■■□□□ 1.51
HS3ST3B1-202ENST00000466596 SCRIBQ14160 1630 aa24.26■■□□□ 1.47
HS3ST3B1-202ENST00000466596 EHMT2Q96KQ7 1210 aa24.1■■□□□ 1.45
HS3ST3B1-202ENST00000466596 ABCC9O60706 1549 aa24.1■■□□□ 1.45
HS3ST3B1-202ENST00000466596 TRIM26Q12899 539 aaPredicted RBP24.07■■□□□ 1.44
HS3ST3B1-202ENST00000466596 RSF1Q96T23 1441 aaPredicted RBP24.04■■□□□ 1.44
HS3ST3B1-202ENST00000466596 FAM9AQ8IZU1 332 aaPredicted RBP23.97■■□□□ 1.43
HS3ST3B1-202ENST00000466596 RB1CC1Q8TDY2 1594 aa23.89■■□□□ 1.41
HS3ST3B1-202ENST00000466596 TRIM41Q8WV44 630 aa23.83■■□□□ 1.41
HS3ST3B1-202ENST00000466596 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
HS3ST3B1-202ENST00000466596 MROH2BQ7Z745 1585 aa23.65■■□□□ 1.38
HS3ST3B1-202ENST00000466596 SCAF1Q9H7N4 1312 aaKnown RBP23.63■■□□□ 1.37
HS3ST3B1-202ENST00000466596 ZEB1P37275 1124 aaPredicted RBP23.62■■□□□ 1.37
HS3ST3B1-202ENST00000466596 WIZO95785 1651 aa23.54■■□□□ 1.36
HS3ST3B1-202ENST00000466596 NACADO15069 1562 aa23.52■■□□□ 1.36
HS3ST3B1-202ENST00000466596 PELP1Q8IZL8 1130 aaKnown RBP23.41■■□□□ 1.34
HS3ST3B1-202ENST00000466596 TTBK1Q5TCY1 1321 aaPredicted RBP23.38■■□□□ 1.33
HS3ST3B1-202ENST00000466596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.36■■□□□ 1.33
HS3ST3B1-202ENST00000466596 CCER1Q8TC90 406 aaPredicted RBP23.17■■□□□ 1.3
HS3ST3B1-202ENST00000466596 BAZ1AQ9NRL2 1556 aaPredicted RBP23.17■■□□□ 1.3
HS3ST3B1-202ENST00000466596 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
HS3ST3B1-202ENST00000466596 NEUROD1Q13562 356 aa23.15■■□□□ 1.3
HS3ST3B1-202ENST00000466596 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.3
HS3ST3B1-202ENST00000466596 ACIN1Q9UKV3 1341 aaKnown RBP23.1■■□□□ 1.29
HS3ST3B1-202ENST00000466596 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
HS3ST3B1-202ENST00000466596 CCDC88BA6NC98 1476 aa23.04■■□□□ 1.28
HS3ST3B1-202ENST00000466596 UNC13AQ9UPW8 1703 aa22.99■■□□□ 1.27
HS3ST3B1-202ENST00000466596 SMARCA4P51532 1647 aa22.99■■□□□ 1.27
HS3ST3B1-202ENST00000466596 GTF3C3Q9Y5Q9 886 aa22.97■■□□□ 1.27
HS3ST3B1-202ENST00000466596 TOP2AP11388 1531 aaKnown RBP22.95■■□□□ 1.27
HS3ST3B1-202ENST00000466596 DIEXFQ68CQ4 756 aaKnown RBP22.95■■□□□ 1.26
HS3ST3B1-202ENST00000466596 SOGA1O94964 1423 aa22.94■■□□□ 1.26
HS3ST3B1-202ENST00000466596 SMARCA2P51531 1590 aa22.92■■□□□ 1.26
HS3ST3B1-202ENST00000466596 RUSC2Q8N2Y8 1516 aa22.88■■□□□ 1.25
HS3ST3B1-202ENST00000466596 YTHDC1Q96MU7 727 aaKnown RBP22.82■■□□□ 1.24
HS3ST3B1-202ENST00000466596 CENPBP07199 599 aaPredicted RBP22.8■■□□□ 1.24
HS3ST3B1-202ENST00000466596 UBTFP17480 764 aaKnown RBP22.77■■□□□ 1.23
HS3ST3B1-202ENST00000466596 CEP162Q5TB80 1403 aa22.74■■□□□ 1.23
HS3ST3B1-202ENST00000466596 BICRAQ9NZM4 1560 aa22.71■■□□□ 1.23
HS3ST3B1-202ENST00000466596 MYT1Q01538 1121 aa22.69■■□□□ 1.22
HS3ST3B1-202ENST00000466596 CSRNP3Q8WYN3 585 aa22.68■■□□□ 1.22
HS3ST3B1-202ENST00000466596 RANGAP1P46060 587 aaPredicted RBP22.65■■□□□ 1.22
HS3ST3B1-202ENST00000466596 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
HS3ST3B1-202ENST00000466596 TNIKQ9UKE5 1360 aa22.56■■□□□ 1.2
HS3ST3B1-202ENST00000466596 HNRNPUL2Q1KMD3 747 aaKnown RBP22.55■■□□□ 1.2
HS3ST3B1-202ENST00000466596 ZNF316A6NFI3 1004 aaPredicted RBP22.55■■□□□ 1.2
HS3ST3B1-202ENST00000466596 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
HS3ST3B1-202ENST00000466596 MIER1Q8N108 512 aa22.47■■□□□ 1.19
HS3ST3B1-202ENST00000466596 GOLGA3Q08378 1498 aa22.43■■□□□ 1.18
HS3ST3B1-202ENST00000466596 ATAD2BQ9ULI0 1458 aa22.43■■□□□ 1.18
HS3ST3B1-202ENST00000466596 BAZ1BQ9UIG0 1483 aaKnown RBP22.39■■□□□ 1.17
HS3ST3B1-202ENST00000466596 EEA1Q15075 1411 aa22.38■■□□□ 1.17
HS3ST3B1-202ENST00000466596 PEG3Q9GZU2 1588 aa22.35■■□□□ 1.17
HS3ST3B1-202ENST00000466596 RAPGEF2Q9Y4G8 1499 aa22.31■■□□□ 1.16
HS3ST3B1-202ENST00000466596 CLIP1P30622 1438 aa22.29■■□□□ 1.16
HS3ST3B1-202ENST00000466596 CEP164Q9UPV0 1460 aa22.27■■□□□ 1.16
HS3ST3B1-202ENST00000466596 KIF21BO75037 1637 aa22.16■■□□□ 1.14
HS3ST3B1-202ENST00000466596 VPS8Q8N3P4 1428 aa22.12■■□□□ 1.13
HS3ST3B1-202ENST00000466596 APLP2Q06481 763 aa22.11■■□□□ 1.13
HS3ST3B1-202ENST00000466596 TOP2BQ02880 1626 aa22.04■■□□□ 1.12
HS3ST3B1-202ENST00000466596 KANK4Q5T7N3 995 aaPredicted RBP22.02■■□□□ 1.12
HS3ST3B1-202ENST00000466596 CUX1P39880 1505 aa21.96■■□□□ 1.11
HS3ST3B1-202ENST00000466596 ARAP1Q96P48 1450 aa21.92■■□□□ 1.1
HS3ST3B1-202ENST00000466596 SUPT16HQ9Y5B9 1047 aaKnown RBP21.91■■□□□ 1.1
HS3ST3B1-202ENST00000466596 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
HS3ST3B1-202ENST00000466596 ITGAEP38570 1179 aa21.9■■□□□ 1.1
HS3ST3B1-202ENST00000466596 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
HS3ST3B1-202ENST00000466596 NCAPD3P42695 1498 aa21.86■■□□□ 1.09
HS3ST3B1-202ENST00000466596 KCNH8Q96L42 1107 aa21.84■■□□□ 1.09
HS3ST3B1-202ENST00000466596 DHX57Q6P158 1386 aaKnown RBP21.82■■□□□ 1.08
HS3ST3B1-202ENST00000466596 KIF27Q86VH2 1401 aa21.79■■□□□ 1.08
HS3ST3B1-202ENST00000466596 HMGXB3Q12766 1538 aa21.78■■□□□ 1.08
HS3ST3B1-202ENST00000466596 BCANQ96GW7 911 aa21.78■■□□□ 1.08
HS3ST3B1-202ENST00000466596 CFTRP13569 1480 aa21.76■■□□□ 1.07
HS3ST3B1-202ENST00000466596 ERICH3Q5RHP9 1530 aa21.76■■□□□ 1.07
HS3ST3B1-202ENST00000466596 P3H3Q8IVL6 736 aa21.72■■□□□ 1.07
HS3ST3B1-202ENST00000466596 ARHGAP35Q9NRY4 1499 aa21.72■■□□□ 1.07
HS3ST3B1-202ENST00000466596 TSHZ2Q9NRE2 1034 aa21.72■■□□□ 1.07
HS3ST3B1-202ENST00000466596 CUX2O14529 1486 aa21.71■■□□□ 1.07
HS3ST3B1-202ENST00000466596 ATP1B4Q9UN42 357 aaPredicted RBP21.65■■□□□ 1.06
HS3ST3B1-202ENST00000466596 IGF1RP08069 1367 aa21.64■■□□□ 1.05
HS3ST3B1-202ENST00000466596 CLSPNQ9HAW4 1339 aa21.63■■□□□ 1.05
HS3ST3B1-202ENST00000466596 HIRIP3Q9BW71 556 aaPredicted RBP21.6■■□□□ 1.05
HS3ST3B1-202ENST00000466596 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.04
HS3ST3B1-202ENST00000466596 CCNB3Q8WWL7 1395 aa21.58■■□□□ 1.04
HS3ST3B1-202ENST00000466596 RRBP1Q9P2E9 1410 aaKnown RBP21.56■■□□□ 1.04
HS3ST3B1-202ENST00000466596 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
HS3ST3B1-202ENST00000466596 CARMIL1Q5VZK9 1371 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms