RNA–Protein interactions for RNA: ENST00000540233.1

SLC38A10-205, Transcript of solute carrier family 38 member 10, humanhuman

TSL 3

Gene SLC38A10, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A10-205ENST00000540233 NISCHQ9Y2I1 1504 aa18.59■□□□□ 0.57
SLC38A10-205ENST00000540233 ABCC9O60706 1549 aa16.84■□□□□ 0.29
SLC38A10-205ENST00000540233 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
SLC38A10-205ENST00000540233 CCDC180Q9P1Z9 1646 aa16.33■□□□□ 0.2
SLC38A10-205ENST00000540233 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
SLC38A10-205ENST00000540233 AEBP2Q6ZN18 517 aaPredicted RBP16.04■□□□□ 0.16
SLC38A10-205ENST00000540233 RB1CC1Q8TDY2 1594 aa15.8■□□□□ 0.12
SLC38A10-205ENST00000540233 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
SLC38A10-205ENST00000540233 NACADO15069 1562 aa15.53■□□□□ 0.08
SLC38A10-205ENST00000540233 PABPN1Q86U42 306 aaKnown RBP eCLIP15.53■□□□□ 0.08
SLC38A10-205ENST00000540233 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
SLC38A10-205ENST00000540233 DCAF1Q9Y4B6 1507 aa15.43■□□□□ 0.06
SLC38A10-205ENST00000540233 DNAJC5Q9H3Z4 198 aa15.42■□□□□ 0.06
SLC38A10-205ENST00000540233 BICRAQ9NZM4 1560 aa15.32■□□□□ 0.04
SLC38A10-205ENST00000540233 DCAF8L2P0C7V8 631 aa15.27■□□□□ 0.04
SLC38A10-205ENST00000540233 CECR2Q9BXF3 1484 aa15.24■□□□□ 0.03
SLC38A10-205ENST00000540233 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
SLC38A10-205ENST00000540233 CC2D2AQ9P2K1 1620 aa15.2■□□□□ 0.02
SLC38A10-205ENST00000540233 SHROOM4Q9ULL8 1493 aa15.11■□□□□ 0.01
SLC38A10-205ENST00000540233 EIF4G1Q04637 1599 aaKnown RBP15.02□□□□□ -0.01
SLC38A10-205ENST00000540233 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
SLC38A10-205ENST00000540233 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
SLC38A10-205ENST00000540233 CUX2O14529 1486 aa14.8□□□□□ -0.04
SLC38A10-205ENST00000540233 ERCC6Q03468 1493 aa14.62□□□□□ -0.07
SLC38A10-205ENST00000540233 TRIM41Q8WV44 630 aa14.52□□□□□ -0.09
SLC38A10-205ENST00000540233 SUPT5HO00267 1087 aaKnown RBP14.47□□□□□ -0.09
SLC38A10-205ENST00000540233 RSF1Q96T23 1441 aaPredicted RBP14.38□□□□□ -0.11
SLC38A10-205ENST00000540233 BAZ1AQ9NRL2 1556 aaPredicted RBP14.38□□□□□ -0.11
SLC38A10-205ENST00000540233 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
SLC38A10-205ENST00000540233 SMARCA4P51532 1647 aa14.33□□□□□ -0.12
SLC38A10-205ENST00000540233 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
SLC38A10-205ENST00000540233 THOC2Q8NI27 1593 aaKnown RBP14.3□□□□□ -0.12
SLC38A10-205ENST00000540233 NESP48681 1621 aa14.27□□□□□ -0.12
SLC38A10-205ENST00000540233 WIZO95785 1651 aa14.26□□□□□ -0.13
SLC38A10-205ENST00000540233 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.13
SLC38A10-205ENST00000540233 HMGXB3Q12766 1538 aa14.19□□□□□ -0.14
SLC38A10-205ENST00000540233 ATAD2BQ9ULI0 1458 aa14.18□□□□□ -0.14
SLC38A10-205ENST00000540233 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
SLC38A10-205ENST00000540233 PEG3Q9GZU2 1588 aa14.16□□□□□ -0.14
SLC38A10-205ENST00000540233 TOP2AP11388 1531 aaKnown RBP14.15□□□□□ -0.14
SLC38A10-205ENST00000540233 LAMC3Q9Y6N6 1575 aa14.13□□□□□ -0.15
SLC38A10-205ENST00000540233 KIF21AQ7Z4S6 1674 aa14.12□□□□□ -0.15
SLC38A10-205ENST00000540233 PLPPR3Q6T4P5 718 aa14.07□□□□□ -0.16
SLC38A10-205ENST00000540233 PDS5BQ9NTI5 1447 aa14.06□□□□□ -0.16
SLC38A10-205ENST00000540233 BAZ1BQ9UIG0 1483 aaKnown RBP14.05□□□□□ -0.16
SLC38A10-205ENST00000540233 SLC24A1O60721 1099 aa13.98□□□□□ -0.17
SLC38A10-205ENST00000540233 MRC2Q9UBG0 1479 aa13.98□□□□□ -0.17
SLC38A10-205ENST00000540233 OSCARQ8IYS5 282 aa13.97□□□□□ -0.17
SLC38A10-205ENST00000540233 WDR62O43379 1518 aa13.95□□□□□ -0.18
SLC38A10-205ENST00000540233 CCDC88BA6NC98 1476 aa13.92□□□□□ -0.18
SLC38A10-205ENST00000540233 RIMBP3CA6NJZ7 1639 aa13.9□□□□□ -0.19
SLC38A10-205ENST00000540233 RIMBP3BA6NNM3 1639 aa13.9□□□□□ -0.19
SLC38A10-205ENST00000540233 RIMBP3Q9UFD9 1639 aa13.9□□□□□ -0.19
SLC38A10-205ENST00000540233 CADPSQ9ULU8 1353 aa13.84□□□□□ -0.19
SLC38A10-205ENST00000540233 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
SLC38A10-205ENST00000540233 ARHGEF11O15085 1522 aa13.78□□□□□ -0.2
SLC38A10-205ENST00000540233 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
SLC38A10-205ENST00000540233 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
SLC38A10-205ENST00000540233 KCNA4P22459 653 aa13.71□□□□□ -0.21
SLC38A10-205ENST00000540233 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
SLC38A10-205ENST00000540233 CYB5RLQ6IPT4 315 aa13.68□□□□□ -0.22
SLC38A10-205ENST00000540233 ABCC8Q09428 1581 aa13.67□□□□□ -0.22
SLC38A10-205ENST00000540233 URB2Q14146 1524 aaKnown RBP13.62□□□□□ -0.23
SLC38A10-205ENST00000540233 ARAP1Q96P48 1450 aa13.6□□□□□ -0.23
SLC38A10-205ENST00000540233 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.24
SLC38A10-205ENST00000540233 CFTRP13569 1480 aa13.58□□□□□ -0.24
SLC38A10-205ENST00000540233 SYNJ1O43426 1573 aa13.56□□□□□ -0.24
SLC38A10-205ENST00000540233 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
SLC38A10-205ENST00000540233 BIVM-ERCC5R4GMW8 1640 aa13.54□□□□□ -0.24
SLC38A10-205ENST00000540233 IFT140Q96RY7 1462 aa13.54□□□□□ -0.24
SLC38A10-205ENST00000540233 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
SLC38A10-205ENST00000540233 CHD1O14646 1710 aa13.51□□□□□ -0.25
SLC38A10-205ENST00000540233 TOP2BQ02880 1626 aa13.51□□□□□ -0.25
SLC38A10-205ENST00000540233 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
SLC38A10-205ENST00000540233 EEA1Q15075 1411 aa13.42□□□□□ -0.26
SLC38A10-205ENST00000540233 CUX1P39880 1505 aa13.42□□□□□ -0.26
SLC38A10-205ENST00000540233 FBLN2P98095 1184 aa13.39□□□□□ -0.27
SLC38A10-205ENST00000540233 TOPBP1Q92547 1522 aa13.38□□□□□ -0.27
SLC38A10-205ENST00000540233 SOGA1O94964 1423 aa13.36□□□□□ -0.27
SLC38A10-205ENST00000540233 FAM9AQ8IZU1 332 aaPredicted RBP13.35□□□□□ -0.27
SLC38A10-205ENST00000540233 AQRO60306 1485 aaKnown RBP eCLIP13.34□□□□□ -0.27
SLC38A10-205ENST00000540233 DNMBPQ6XZF7 1577 aa13.33□□□□□ -0.28
SLC38A10-205ENST00000540233 LOC105371045A0A1W2PR82 267 aa13.32□□□□□ -0.28
SLC38A10-205ENST00000540233 CLASP1Q7Z460 1538 aa13.32□□□□□ -0.28
SLC38A10-205ENST00000540233 RUSC2Q8N2Y8 1516 aa13.31□□□□□ -0.28
SLC38A10-205ENST00000540233 KIF21BO75037 1637 aa13.31□□□□□ -0.28
SLC38A10-205ENST00000540233 TARBP1Q13395 1621 aaKnown RBP13.31□□□□□ -0.28
SLC38A10-205ENST00000540233 ILDR1Q86SU0 546 aaPredicted RBP13.28□□□□□ -0.28
SLC38A10-205ENST00000540233 FGD5Q6ZNL6 1462 aa13.26□□□□□ -0.29
SLC38A10-205ENST00000540233 SENP3Q9H4L4 574 aaPredicted RBP13.26□□□□□ -0.29
SLC38A10-205ENST00000540233 ADRA2BP18089 450 aa13.25□□□□□ -0.29
SLC38A10-205ENST00000540233 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
SLC38A10-205ENST00000540233 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
SLC38A10-205ENST00000540233 WDR97A6NE52 1622 aa13.23□□□□□ -0.29
SLC38A10-205ENST00000540233 GAPVD1Q14C86 1478 aa13.23□□□□□ -0.29
SLC38A10-205ENST00000540233 SNAPC4Q5SXM2 1469 aa13.22□□□□□ -0.29
SLC38A10-205ENST00000540233 SLC4A1APQ9BWU0 796 aaKnown RBP13.21□□□□□ -0.29
SLC38A10-205ENST00000540233 KIF27Q86VH2 1401 aa13.21□□□□□ -0.3
SLC38A10-205ENST00000540233 POLA1P09884 1462 aaPredicted RBP13.2□□□□□ -0.3
SLC38A10-205ENST00000540233 ERICH3Q5RHP9 1530 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms