RNA–Protein interactions for RNA: ENST00000443478.3

KCNQ4-202, Transcript of potassium voltage-gated channel subfamily Q member 4, humanhuman

APPRIS ALT2 TSL 5

Gene KCNQ4, Length 2,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4-202ENST00000443478 NISCHQ9Y2I1 1504 aa35.27■■■■□ 3.24
KCNQ4-202ENST00000443478 CCDC180Q9P1Z9 1646 aa30.7■■■□□ 2.51
KCNQ4-202ENST00000443478 ZCCHC6Q5VYS8 1495 aaKnown RBP29.63■■■□□ 2.33
KCNQ4-202ENST00000443478 DCAF8L2P0C7V8 631 aa29.22■■■□□ 2.27
KCNQ4-202ENST00000443478 DCAF1Q9Y4B6 1507 aa29.11■■■□□ 2.25
KCNQ4-202ENST00000443478 ABCC9O60706 1549 aa29.1■■■□□ 2.25
KCNQ4-202ENST00000443478 SHROOM4Q9ULL8 1493 aa28.91■■■□□ 2.22
KCNQ4-202ENST00000443478 MYO15BQ96JP2 1530 aa28.73■■■□□ 2.19
KCNQ4-202ENST00000443478 NACADO15069 1562 aa28.59■■■□□ 2.17
KCNQ4-202ENST00000443478 RB1CC1Q8TDY2 1594 aa28.36■■■□□ 2.13
KCNQ4-202ENST00000443478 SCRIBQ14160 1630 aa28.33■■■□□ 2.13
KCNQ4-202ENST00000443478 SUPT5HO00267 1087 aaKnown RBP27.82■■■□□ 2.04
KCNQ4-202ENST00000443478 UNC13AQ9UPW8 1703 aa27.82■■■□□ 2.04
KCNQ4-202ENST00000443478 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
KCNQ4-202ENST00000443478 PABPN1Q86U42 306 aaKnown RBP eCLIP27.47■■□□□ 1.99
KCNQ4-202ENST00000443478 CECR2Q9BXF3 1484 aa27.45■■□□□ 1.98
KCNQ4-202ENST00000443478 RSF1Q96T23 1441 aaPredicted RBP27.39■■□□□ 1.97
KCNQ4-202ENST00000443478 MROH2BQ7Z745 1585 aa27.28■■□□□ 1.96
KCNQ4-202ENST00000443478 BAZ1AQ9NRL2 1556 aaPredicted RBP27.22■■□□□ 1.95
KCNQ4-202ENST00000443478 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
KCNQ4-202ENST00000443478 WIZO95785 1651 aa27.07■■□□□ 1.92
KCNQ4-202ENST00000443478 TOP2AP11388 1531 aaKnown RBP26.75■■□□□ 1.87
KCNQ4-202ENST00000443478 PEG3Q9GZU2 1588 aa26.73■■□□□ 1.87
KCNQ4-202ENST00000443478 EIF4G1Q04637 1599 aaKnown RBP26.69■■□□□ 1.86
KCNQ4-202ENST00000443478 ATAD2BQ9ULI0 1458 aa26.66■■□□□ 1.86
KCNQ4-202ENST00000443478 SMARCA2P51531 1590 aa26.62■■□□□ 1.85
KCNQ4-202ENST00000443478 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
KCNQ4-202ENST00000443478 BAZ1BQ9UIG0 1483 aaKnown RBP26.52■■□□□ 1.84
KCNQ4-202ENST00000443478 CCDC88BA6NC98 1476 aa26.51■■□□□ 1.83
KCNQ4-202ENST00000443478 NCAPD3P42695 1498 aa26.4■■□□□ 1.82
KCNQ4-202ENST00000443478 HMGXB3Q12766 1538 aa26.36■■□□□ 1.81
KCNQ4-202ENST00000443478 CC2D2AQ9P2K1 1620 aa26.3■■□□□ 1.8
KCNQ4-202ENST00000443478 TRIM41Q8WV44 630 aa26.12■■□□□ 1.77
KCNQ4-202ENST00000443478 ABCC8Q09428 1581 aa25.99■■□□□ 1.75
KCNQ4-202ENST00000443478 CFTRP13569 1480 aa25.83■■□□□ 1.73
KCNQ4-202ENST00000443478 PELP1Q8IZL8 1130 aaKnown RBP25.81■■□□□ 1.72
KCNQ4-202ENST00000443478 WRNQ14191 1432 aaPredicted RBP eCLIP25.78■■□□□ 1.72
KCNQ4-202ENST00000443478 CADPSQ9ULU8 1353 aa25.75■■□□□ 1.71
KCNQ4-202ENST00000443478 FAM9AQ8IZU1 332 aaPredicted RBP25.71■■□□□ 1.71
KCNQ4-202ENST00000443478 PRDM2Q13029 1718 aa25.7■■□□□ 1.7
KCNQ4-202ENST00000443478 SYNJ1O43426 1573 aa25.69■■□□□ 1.7
KCNQ4-202ENST00000443478 DNAJC5BQ9UF47 199 aa25.69■■□□□ 1.7
KCNQ4-202ENST00000443478 LOC105371045A0A1W2PR82 267 aa25.64■■□□□ 1.69
KCNQ4-202ENST00000443478 NESP48681 1621 aa25.56■■□□□ 1.68
KCNQ4-202ENST00000443478 TOP2BQ02880 1626 aa25.56■■□□□ 1.68
KCNQ4-202ENST00000443478 HRCP23327 699 aa25.53■■□□□ 1.68
KCNQ4-202ENST00000443478 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
KCNQ4-202ENST00000443478 SOGA1O94964 1423 aa25.51■■□□□ 1.67
KCNQ4-202ENST00000443478 CUX1P39880 1505 aa25.5■■□□□ 1.67
KCNQ4-202ENST00000443478 LAMC3Q9Y6N6 1575 aa25.49■■□□□ 1.67
KCNQ4-202ENST00000443478 FANCD2Q9BXW9 1451 aa25.48■■□□□ 1.67
KCNQ4-202ENST00000443478 RUSC2Q8N2Y8 1516 aa25.42■■□□□ 1.66
KCNQ4-202ENST00000443478 EEA1Q15075 1411 aa25.39■■□□□ 1.66
KCNQ4-202ENST00000443478 EHMT2Q96KQ7 1210 aa25.39■■□□□ 1.66
KCNQ4-202ENST00000443478 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
KCNQ4-202ENST00000443478 CEP164Q9UPV0 1460 aa25.31■■□□□ 1.64
KCNQ4-202ENST00000443478 CSRNP3Q8WYN3 585 aa25.3■■□□□ 1.64
KCNQ4-202ENST00000443478 DNMBPQ6XZF7 1577 aa25.24■■□□□ 1.63
KCNQ4-202ENST00000443478 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
KCNQ4-202ENST00000443478 FGD5Q6ZNL6 1462 aa25.22■■□□□ 1.63
KCNQ4-202ENST00000443478 TOPBP1Q92547 1522 aa25.21■■□□□ 1.63
KCNQ4-202ENST00000443478 URB2Q14146 1524 aaKnown RBP25.16■■□□□ 1.62
KCNQ4-202ENST00000443478 KIF27Q86VH2 1401 aa25.12■■□□□ 1.61
KCNQ4-202ENST00000443478 MYT1Q01538 1121 aa25.09■■□□□ 1.61
KCNQ4-202ENST00000443478 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
KCNQ4-202ENST00000443478 GOLGA3Q08378 1498 aa25.08■■□□□ 1.61
KCNQ4-202ENST00000443478 KIF21BO75037 1637 aa25.08■■□□□ 1.61
KCNQ4-202ENST00000443478 CUX2O14529 1486 aa25.07■■□□□ 1.6
KCNQ4-202ENST00000443478 RAD54L2Q9Y4B4 1467 aa25.04■■□□□ 1.6
KCNQ4-202ENST00000443478 UBTFP17480 764 aaKnown RBP25.02■■□□□ 1.6
KCNQ4-202ENST00000443478 TNIKQ9UKE5 1360 aa25■■□□□ 1.59
KCNQ4-202ENST00000443478 MRC2Q9UBG0 1479 aa25■■□□□ 1.59
KCNQ4-202ENST00000443478 RAPGEF2Q9Y4G8 1499 aa24.97■■□□□ 1.59
KCNQ4-202ENST00000443478 ABCA10Q8WWZ4 1543 aa24.97■■□□□ 1.59
KCNQ4-202ENST00000443478 PRXQ9BXM0 1461 aa24.95■■□□□ 1.58
KCNQ4-202ENST00000443478 ERCC6Q03468 1493 aa24.93■■□□□ 1.58
KCNQ4-202ENST00000443478 IGF1RP08069 1367 aa24.9■■□□□ 1.58
KCNQ4-202ENST00000443478 CEP162Q5TB80 1403 aa24.9■■□□□ 1.58
KCNQ4-202ENST00000443478 ERICH3Q5RHP9 1530 aa24.9■■□□□ 1.58
KCNQ4-202ENST00000443478 WDR97A6NE52 1622 aa24.89■■□□□ 1.57
KCNQ4-202ENST00000443478 WDR62O43379 1518 aa24.85■■□□□ 1.57
KCNQ4-202ENST00000443478 TARBP1Q13395 1621 aaKnown RBP24.81■■□□□ 1.56
KCNQ4-202ENST00000443478 TDRD9Q8NDG6 1382 aaKnown RBP24.79■■□□□ 1.56
KCNQ4-202ENST00000443478 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
KCNQ4-202ENST00000443478 THOC2Q8NI27 1593 aaKnown RBP24.78■■□□□ 1.56
KCNQ4-202ENST00000443478 ABCA5Q8WWZ7 1642 aa24.77■■□□□ 1.56
KCNQ4-202ENST00000443478 PPARGC1BQ86YN6 1023 aaKnown RBP24.74■■□□□ 1.55
KCNQ4-202ENST00000443478 GAPVD1Q14C86 1478 aa24.73■■□□□ 1.55
KCNQ4-202ENST00000443478 CLIP1P30622 1438 aa24.7■■□□□ 1.54
KCNQ4-202ENST00000443478 CUL7Q14999 1698 aa24.69■■□□□ 1.54
KCNQ4-202ENST00000443478 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
KCNQ4-202ENST00000443478 RANGAP1P46060 587 aaPredicted RBP24.66■■□□□ 1.54
KCNQ4-202ENST00000443478 AQRO60306 1485 aaKnown RBP eCLIP24.63■■□□□ 1.534e-7■■■■■ 32.5
KCNQ4-202ENST00000443478 ZNF608Q9ULD9 1512 aaPredicted RBP24.59■■□□□ 1.53
KCNQ4-202ENST00000443478 PBRM1Q86U86 1689 aa24.59■■□□□ 1.53
KCNQ4-202ENST00000443478 GRIN2BQ13224 1484 aa24.52■■□□□ 1.52
KCNQ4-202ENST00000443478 PCGF6Q9BYE7 350 aa24.51■■□□□ 1.51
KCNQ4-202ENST00000443478 EIF4G3O43432 1585 aaKnown RBP24.49■■□□□ 1.51
KCNQ4-202ENST00000443478 VPS8Q8N3P4 1428 aa24.47■■□□□ 1.51
KCNQ4-202ENST00000443478 ADAMTS12P58397 1594 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms