RNA–Protein interactions for RNA: ENST00000339490.7

PHKA1-201, Transcript of phosphorylase kinase regulatory subunit alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHKA1, Length 6,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1-201ENST00000339490 DCAF8L2P0C7V8 631 aa30.13■■■□□ 2.41
PHKA1-201ENST00000339490 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
PHKA1-201ENST00000339490 SHROOM4Q9ULL8 1493 aa28.14■■■□□ 2.1
PHKA1-201ENST00000339490 NISCHQ9Y2I1 1504 aa28.11■■■□□ 2.09
PHKA1-201ENST00000339490 EHMT2Q96KQ7 1210 aa28.04■■■□□ 2.08
PHKA1-201ENST00000339490 PELP1Q8IZL8 1130 aaKnown RBP27.38■■□□□ 1.97
PHKA1-201ENST00000339490 APLP2Q06481 763 aa27.28■■□□□ 1.96
PHKA1-201ENST00000339490 FAM9AQ8IZU1 332 aaPredicted RBP27.16■■□□□ 1.94
PHKA1-201ENST00000339490 TTBK1Q5TCY1 1321 aaPredicted RBP27.1■■□□□ 1.93
PHKA1-201ENST00000339490 PCGF6Q9BYE7 350 aa26.97■■□□□ 1.91
PHKA1-201ENST00000339490 RANGAP1P46060 587 aaPredicted RBP26.72■■□□□ 1.87
PHKA1-201ENST00000339490 CCER1Q8TC90 406 aaPredicted RBP26.48■■□□□ 1.83
PHKA1-201ENST00000339490 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
PHKA1-201ENST00000339490 CENPBP07199 599 aaPredicted RBP26.46■■□□□ 1.83
PHKA1-201ENST00000339490 ATP1B4Q9UN42 357 aaPredicted RBP26.42■■□□□ 1.82
PHKA1-201ENST00000339490 ZEB1P37275 1124 aaPredicted RBP26.38■■□□□ 1.81
PHKA1-201ENST00000339490 ERICH6Q7L0X2 663 aa26.38■■□□□ 1.81
PHKA1-201ENST00000339490 UBTFP17480 764 aaKnown RBP26.24■■□□□ 1.79
PHKA1-201ENST00000339490 YTHDC1Q96MU7 727 aaKnown RBP26.1■■□□□ 1.77
PHKA1-201ENST00000339490 PPARGC1BQ86YN6 1023 aaKnown RBP26.03■■□□□ 1.76
PHKA1-201ENST00000339490 NEFLP07196 543 aa25.94■■□□□ 1.74
PHKA1-201ENST00000339490 TRIM26Q12899 539 aaPredicted RBP25.67■■□□□ 1.7
PHKA1-201ENST00000339490 ITGAEP38570 1179 aa25.56■■□□□ 1.68
PHKA1-201ENST00000339490 LOC105371045A0A1W2PR82 267 aa25.46■■□□□ 1.67
PHKA1-201ENST00000339490 HRCP23327 699 aa25.46■■□□□ 1.67
PHKA1-201ENST00000339490 POLR3GLQ9BT43 218 aa25.45■■□□□ 1.66
PHKA1-201ENST00000339490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.39■■□□□ 1.65
PHKA1-201ENST00000339490 HNRNPUL2Q1KMD3 747 aaKnown RBP25.39■■□□□ 1.65
PHKA1-201ENST00000339490 MYT1Q01538 1121 aa25.37■■□□□ 1.65
PHKA1-201ENST00000339490 MYT1LQ9UL68 1186 aa25.35■■□□□ 1.65
PHKA1-201ENST00000339490 CNGB1Q14028 1251 aaPredicted RBP25.28■■□□□ 1.64
PHKA1-201ENST00000339490 CHIC1Q5VXU3 224 aa25.24■■□□□ 1.63
PHKA1-201ENST00000339490 DAXXQ9UER7 740 aaPredicted RBP25.23■■□□□ 1.63
PHKA1-201ENST00000339490 SLC4A1APQ9BWU0 796 aaKnown RBP24.92■■□□□ 1.58
PHKA1-201ENST00000339490 DIEXFQ68CQ4 756 aaKnown RBP24.9■■□□□ 1.58
PHKA1-201ENST00000339490 FAM50AQ14320 339 aaKnown RBP24.82■■□□□ 1.56
PHKA1-201ENST00000339490 CLSPNQ9HAW4 1339 aa24.72■■□□□ 1.55
PHKA1-201ENST00000339490 TRIM52Q96A61 297 aa24.7■■□□□ 1.54
PHKA1-201ENST00000339490 NEUROD1Q13562 356 aa24.69■■□□□ 1.54
PHKA1-201ENST00000339490 ZNF316A6NFI3 1004 aaPredicted RBP24.67■■□□□ 1.54
PHKA1-201ENST00000339490 RTL5Q5HYW3 569 aaPredicted RBP24.64■■□□□ 1.53
PHKA1-201ENST00000339490 BCANQ96GW7 911 aa24.58■■□□□ 1.53
PHKA1-201ENST00000339490 PABPN1Q86U42 306 aaKnown RBP eCLIP24.57■■□□□ 1.52
PHKA1-201ENST00000339490 ZNF326Q5BKZ1 582 aaKnown RBP24.48■■□□□ 1.51
PHKA1-201ENST00000339490 GTF3C3Q9Y5Q9 886 aa24.46■■□□□ 1.51
PHKA1-201ENST00000339490 ANP32CO43423 234 aa24.41■■□□□ 1.5
PHKA1-201ENST00000339490 ABCC9O60706 1549 aa24.39■■□□□ 1.5
PHKA1-201ENST00000339490 CDK11AQ9UQ88 783 aaPredicted RBP24.26■■□□□ 1.47
PHKA1-201ENST00000339490 FBLN2P98095 1184 aa24.25■■□□□ 1.47
PHKA1-201ENST00000339490 P3H3Q8IVL6 736 aa24.19■■□□□ 1.46
PHKA1-201ENST00000339490 ARID3CA6NKF2 412 aa24.17■■□□□ 1.46
PHKA1-201ENST00000339490 BCL11AQ9H165 835 aa24.17■■□□□ 1.46
PHKA1-201ENST00000339490 ZBTB47Q9UFB7 747 aaPredicted RBP24.15■■□□□ 1.46
PHKA1-201ENST00000339490 CANXP27824 592 aaKnown RBP24.11■■□□□ 1.45
PHKA1-201ENST00000339490 SLC24A1O60721 1099 aa24.08■■□□□ 1.45
PHKA1-201ENST00000339490 ACIN1Q9UKV3 1341 aaKnown RBP24.01■■□□□ 1.43
PHKA1-201ENST00000339490 CSRNP3Q8WYN3 585 aa24■■□□□ 1.43
PHKA1-201ENST00000339490 ZNF777Q9ULD5 760 aaPredicted RBP23.98■■□□□ 1.43
PHKA1-201ENST00000339490 NEFMP07197 916 aa23.91■■□□□ 1.42
PHKA1-201ENST00000339490 NPM2Q86SE8 214 aaKnown RBP23.87■■□□□ 1.41
PHKA1-201ENST00000339490 ANP32AP39687 249 aaKnown RBP23.86■■□□□ 1.41
PHKA1-201ENST00000339490 FKBP8Q14318 412 aa23.78■■□□□ 1.4
PHKA1-201ENST00000339490 TONSLQ96HA7 1378 aa23.71■■□□□ 1.39
PHKA1-201ENST00000339490 DDX10Q13206 875 aaKnown RBP23.68■■□□□ 1.38
PHKA1-201ENST00000339490 HNRNPUQ00839 825 aaKnown RBP eCLIP23.68■■□□□ 1.38
PHKA1-201ENST00000339490 FAM9BQ8IZU0 186 aa23.67■■□□□ 1.38
PHKA1-201ENST00000339490 CHGAP10645 457 aaKnown RBP23.66■■□□□ 1.38
PHKA1-201ENST00000339490 SALL2Q9Y467 1007 aaPredicted RBP23.63■■□□□ 1.37
PHKA1-201ENST00000339490 CHIC2Q9UKJ5 165 aa23.56■■□□□ 1.36
PHKA1-201ENST00000339490 STAG3Q9UJ98 1225 aa23.53■■□□□ 1.36
PHKA1-201ENST00000339490 ESF1Q9H501 851 aaKnown RBP23.53■■□□□ 1.36
PHKA1-201ENST00000339490 SCRIBQ14160 1630 aa23.53■■□□□ 1.36
PHKA1-201ENST00000339490 HSP90AA1P07900 732 aaKnown RBP23.53■■□□□ 1.36
PHKA1-201ENST00000339490 PLPPR3Q6T4P5 718 aa23.5■■□□□ 1.35
PHKA1-201ENST00000339490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.47■■□□□ 1.35
PHKA1-201ENST00000339490 DCAF1Q9Y4B6 1507 aa23.47■■□□□ 1.35
PHKA1-201ENST00000339490 UPF2Q9HAU5 1272 aaKnown RBP23.45■■□□□ 1.34
PHKA1-201ENST00000339490 TMC1Q8TDI8 760 aa23.44■■□□□ 1.34
PHKA1-201ENST00000339490 ANP32BQ92688 251 aaKnown RBP23.44■■□□□ 1.34
PHKA1-201ENST00000339490 EIF5BO60841 1220 aaKnown RBP23.43■■□□□ 1.34
PHKA1-201ENST00000339490 CCDC136Q96JN2 1154 aa23.41■■□□□ 1.34
PHKA1-201ENST00000339490 KDM2AQ9Y2K7 1162 aa23.39■■□□□ 1.33
PHKA1-201ENST00000339490 HIRIP3Q9BW71 556 aaPredicted RBP23.37■■□□□ 1.33
PHKA1-201ENST00000339490 NBR1Q14596 966 aa23.35■■□□□ 1.33
PHKA1-201ENST00000339490 MRS2Q9HD23 443 aa23.35■■□□□ 1.33
PHKA1-201ENST00000339490 IRX6P78412 446 aaPredicted RBP23.34■■□□□ 1.33
PHKA1-201ENST00000339490 WDR43Q15061 677 aaKnown RBP eCLIP23.33■■□□□ 1.32
PHKA1-201ENST00000339490 MIER1Q8N108 512 aa23.32■■□□□ 1.32
PHKA1-201ENST00000339490 NPM1P06748 294 aaKnown RBP eCLIP23.31■■□□□ 1.32
PHKA1-201ENST00000339490 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.3■■□□□ 1.32
PHKA1-201ENST00000339490 ARXQ96QS3 562 aa23.27■■□□□ 1.32
PHKA1-201ENST00000339490 TSPY4P0CV99 314 aa23.25■■□□□ 1.31
PHKA1-201ENST00000339490 TSPY10P0CW01 314 aa23.25■■□□□ 1.31
PHKA1-201ENST00000339490 MTUS2Q5JR59 1369 aa23.24■■□□□ 1.31
PHKA1-201ENST00000339490 ZCCHC6Q5VYS8 1495 aaKnown RBP23.21■■□□□ 1.31
PHKA1-201ENST00000339490 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
PHKA1-201ENST00000339490 RRP7BPQ9NSQ0 103 aa23.17■■□□□ 1.3
PHKA1-201ENST00000339490 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
PHKA1-201ENST00000339490 CLIP1P30622 1438 aa23.15■■□□□ 1.3
PHKA1-201ENST00000339490 EIF4G2P78344 907 aaKnown RBP eCLIP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms