RNA–Protein interactions for RNA: ENST00000551861.1

ITGA5-208, Transcript of integrin subunit alpha 5, humanhuman

TSL 4

Gene ITGA5, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-208ENST00000551861 NISCHQ9Y2I1 1504 aa27.46■■□□□ 1.99
ITGA5-208ENST00000551861 ABCC9O60706 1549 aa24.71■■□□□ 1.55
ITGA5-208ENST00000551861 CCDC180Q9P1Z9 1646 aa24.64■■□□□ 1.54
ITGA5-208ENST00000551861 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
ITGA5-208ENST00000551861 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
ITGA5-208ENST00000551861 NACADO15069 1562 aa23.35■■□□□ 1.33
ITGA5-208ENST00000551861 DNAJC5BQ9UF47 199 aa23.13■■□□□ 1.29
ITGA5-208ENST00000551861 PABPN1Q86U42 306 aaKnown RBP eCLIP23.02■■□□□ 1.28
ITGA5-208ENST00000551861 MYO15BQ96JP2 1530 aa22.98■■□□□ 1.27
ITGA5-208ENST00000551861 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
ITGA5-208ENST00000551861 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
ITGA5-208ENST00000551861 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
ITGA5-208ENST00000551861 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
ITGA5-208ENST00000551861 SHROOM4Q9ULL8 1493 aa22.52■■□□□ 1.2
ITGA5-208ENST00000551861 SCRIBQ14160 1630 aa22.47■■□□□ 1.19
ITGA5-208ENST00000551861 CC2D2AQ9P2K1 1620 aa22.29■■□□□ 1.16
ITGA5-208ENST00000551861 CECR2Q9BXF3 1484 aa22.28■■□□□ 1.16
ITGA5-208ENST00000551861 EIF4G1Q04637 1599 aaKnown RBP22.24■■□□□ 1.15
ITGA5-208ENST00000551861 NCAPD3P42695 1498 aa21.53■■□□□ 1.04
ITGA5-208ENST00000551861 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.03
ITGA5-208ENST00000551861 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
ITGA5-208ENST00000551861 SMARCA4P51532 1647 aa21.42■■□□□ 1.02
ITGA5-208ENST00000551861 ERCC6Q03468 1493 aa21.41■■□□□ 1.02
ITGA5-208ENST00000551861 HMGXB3Q12766 1538 aa21.36■■□□□ 1.01
ITGA5-208ENST00000551861 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
ITGA5-208ENST00000551861 DNAJC5Q9H3Z4 198 aa21.34■■□□□ 1.01
ITGA5-208ENST00000551861 CUX2O14529 1486 aa21.32■■□□□ 1
ITGA5-208ENST00000551861 BAZ1BQ9UIG0 1483 aaKnown RBP21.3■■□□□ 1
ITGA5-208ENST00000551861 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
ITGA5-208ENST00000551861 NESP48681 1621 aa21.17■□□□□ 0.98
ITGA5-208ENST00000551861 MROH2BQ7Z745 1585 aa21.13■□□□□ 0.97
ITGA5-208ENST00000551861 LAMC3Q9Y6N6 1575 aa21.07■□□□□ 0.96
ITGA5-208ENST00000551861 PDS5BQ9NTI5 1447 aa21.01■□□□□ 0.95
ITGA5-208ENST00000551861 THOC2Q8NI27 1593 aaKnown RBP20.94■□□□□ 0.94
ITGA5-208ENST00000551861 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
ITGA5-208ENST00000551861 KIF21AQ7Z4S6 1674 aa20.89■□□□□ 0.94
ITGA5-208ENST00000551861 WIZO95785 1651 aa20.89■□□□□ 0.93
ITGA5-208ENST00000551861 MRC2Q9UBG0 1479 aa20.77■□□□□ 0.92
ITGA5-208ENST00000551861 RSF1Q96T23 1441 aaPredicted RBP20.7■□□□□ 0.9
ITGA5-208ENST00000551861 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
ITGA5-208ENST00000551861 WDR62O43379 1518 aa20.69■□□□□ 0.9
ITGA5-208ENST00000551861 FANCD2Q9BXW9 1451 aa20.66■□□□□ 0.9
ITGA5-208ENST00000551861 TOP2AP11388 1531 aaKnown RBP20.64■□□□□ 0.9
ITGA5-208ENST00000551861 CFTRP13569 1480 aa20.63■□□□□ 0.89
ITGA5-208ENST00000551861 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
ITGA5-208ENST00000551861 URB2Q14146 1524 aaKnown RBP20.44■□□□□ 0.86
ITGA5-208ENST00000551861 OSCARQ8IYS5 282 aa20.42■□□□□ 0.86
ITGA5-208ENST00000551861 CCDC88BA6NC98 1476 aa20.42■□□□□ 0.86
ITGA5-208ENST00000551861 PRDM2Q13029 1718 aa20.4■□□□□ 0.86
ITGA5-208ENST00000551861 IFT140Q96RY7 1462 aa20.3■□□□□ 0.84
ITGA5-208ENST00000551861 ABCC8Q09428 1581 aa20.28■□□□□ 0.84
ITGA5-208ENST00000551861 TOPBP1Q92547 1522 aa20.25■□□□□ 0.83
ITGA5-208ENST00000551861 ZNF608Q9ULD9 1512 aaPredicted RBP20.2■□□□□ 0.82
ITGA5-208ENST00000551861 DNMBPQ6XZF7 1577 aa20.18■□□□□ 0.82
ITGA5-208ENST00000551861 EIF4G3O43432 1585 aaKnown RBP20.1■□□□□ 0.81
ITGA5-208ENST00000551861 AQRO60306 1485 aaKnown RBP eCLIP20.05■□□□□ 0.83e-8■■■□□ 16
ITGA5-208ENST00000551861 FBLN2P98095 1184 aa20.05■□□□□ 0.8
ITGA5-208ENST00000551861 RIMBP3CA6NJZ7 1639 aa20.04■□□□□ 0.8
ITGA5-208ENST00000551861 RIMBP3BA6NNM3 1639 aa20.04■□□□□ 0.8
ITGA5-208ENST00000551861 RIMBP3Q9UFD9 1639 aa20.04■□□□□ 0.8
ITGA5-208ENST00000551861 POLA1P09884 1462 aaPredicted RBP20.04■□□□□ 0.8
ITGA5-208ENST00000551861 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.8
ITGA5-208ENST00000551861 SOGA1O94964 1423 aa20■□□□□ 0.79
ITGA5-208ENST00000551861 ARHGEF11O15085 1522 aa19.99■□□□□ 0.79
ITGA5-208ENST00000551861 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
ITGA5-208ENST00000551861 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.78
ITGA5-208ENST00000551861 CHD1O14646 1710 aa19.94■□□□□ 0.78
ITGA5-208ENST00000551861 CYB5RLQ6IPT4 315 aa19.93■□□□□ 0.78
ITGA5-208ENST00000551861 FGD5Q6ZNL6 1462 aa19.92■□□□□ 0.78
ITGA5-208ENST00000551861 SUPT5HO00267 1087 aaKnown RBP19.9■□□□□ 0.78
ITGA5-208ENST00000551861 WDR97A6NE52 1622 aa19.89■□□□□ 0.77
ITGA5-208ENST00000551861 CHMP7Q8WUX9 453 aaPredicted RBP19.89■□□□□ 0.77
ITGA5-208ENST00000551861 CUX1P39880 1505 aa19.86■□□□□ 0.77
ITGA5-208ENST00000551861 SNAPC4Q5SXM2 1469 aa19.85■□□□□ 0.77
ITGA5-208ENST00000551861 GRIN2BQ13224 1484 aa19.82■□□□□ 0.76
ITGA5-208ENST00000551861 MAGI1Q96QZ7 1491 aaPredicted RBP19.81■□□□□ 0.76
ITGA5-208ENST00000551861 TRHP20396 242 aaPredicted RBP19.78■□□□□ 0.76
ITGA5-208ENST00000551861 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
ITGA5-208ENST00000551861 ARAP1Q96P48 1450 aa19.77■□□□□ 0.76
ITGA5-208ENST00000551861 SYNJ2O15056 1496 aa19.75■□□□□ 0.75
ITGA5-208ENST00000551861 GAPVD1Q14C86 1478 aa19.74■□□□□ 0.75
ITGA5-208ENST00000551861 CLASP1Q7Z460 1538 aa19.7■□□□□ 0.74
ITGA5-208ENST00000551861 ABCA10Q8WWZ4 1543 aa19.69■□□□□ 0.74
ITGA5-208ENST00000551861 PBRM1Q86U86 1689 aa19.68■□□□□ 0.74
ITGA5-208ENST00000551861 WRNQ14191 1432 aaPredicted RBP eCLIP19.66■□□□□ 0.74
ITGA5-208ENST00000551861 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
ITGA5-208ENST00000551861 TOP2BQ02880 1626 aa19.56■□□□□ 0.72
ITGA5-208ENST00000551861 BIVM-ERCC5R4GMW8 1640 aa19.54■□□□□ 0.72
ITGA5-208ENST00000551861 GRIN2AQ12879 1464 aa19.54■□□□□ 0.72
ITGA5-208ENST00000551861 FHAD1B1AJZ9 1412 aa19.5■□□□□ 0.71
ITGA5-208ENST00000551861 ADAMTS12P58397 1594 aa19.49■□□□□ 0.71
ITGA5-208ENST00000551861 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
ITGA5-208ENST00000551861 NUP160Q12769 1436 aa19.44■□□□□ 0.7
ITGA5-208ENST00000551861 CEP170Q5SW79 1584 aa19.43■□□□□ 0.7
ITGA5-208ENST00000551861 ERCC6L2Q5T890 1561 aa19.37■□□□□ 0.69
ITGA5-208ENST00000551861 SHROOM2Q13796 1616 aa19.34■□□□□ 0.69
ITGA5-208ENST00000551861 JPH4Q96JJ6 628 aa19.34■□□□□ 0.69
ITGA5-208ENST00000551861 PRG4Q92954 1404 aaPredicted RBP19.32■□□□□ 0.68
ITGA5-208ENST00000551861 NPM1P06748 294 aaKnown RBP eCLIP19.27■□□□□ 0.68
ITGA5-208ENST00000551861 AEBP2Q6ZN18 517 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms