RNA–Protein interactions for RNA: ENST00000347132.9

KCNQ4-201, Transcript of potassium voltage-gated channel subfamily Q member 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KCNQ4, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4-201ENST00000347132 NISCHQ9Y2I1 1504 aa28.19■■■□□ 2.1
KCNQ4-201ENST00000347132 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
KCNQ4-201ENST00000347132 SHROOM4Q9ULL8 1493 aa26.64■■□□□ 1.86
KCNQ4-201ENST00000347132 SUPT5HO00267 1087 aaKnown RBP26.51■■□□□ 1.83
KCNQ4-201ENST00000347132 EHMT2Q96KQ7 1210 aa25.48■■□□□ 1.67
KCNQ4-201ENST00000347132 PCGF6Q9BYE7 350 aa25.14■■□□□ 1.62
KCNQ4-201ENST00000347132 FAM9AQ8IZU1 332 aaPredicted RBP24.89■■□□□ 1.58
KCNQ4-201ENST00000347132 LOC105371045A0A1W2PR82 267 aa24.67■■□□□ 1.54
KCNQ4-201ENST00000347132 PPARGC1BQ86YN6 1023 aaKnown RBP24.61■■□□□ 1.53
KCNQ4-201ENST00000347132 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
KCNQ4-201ENST00000347132 TTBK1Q5TCY1 1321 aaPredicted RBP24.56■■□□□ 1.52
KCNQ4-201ENST00000347132 HRCP23327 699 aa24.3■■□□□ 1.48
KCNQ4-201ENST00000347132 TRIM41Q8WV44 630 aa24.16■■□□□ 1.46
KCNQ4-201ENST00000347132 MYO15BQ96JP2 1530 aa23.95■■□□□ 1.42
KCNQ4-201ENST00000347132 RANGAP1P46060 587 aaPredicted RBP23.9■■□□□ 1.42
KCNQ4-201ENST00000347132 TRIM26Q12899 539 aaPredicted RBP23.77■■□□□ 1.4
KCNQ4-201ENST00000347132 CCER1Q8TC90 406 aaPredicted RBP23.66■■□□□ 1.38
KCNQ4-201ENST00000347132 ZCCHC6Q5VYS8 1495 aaKnown RBP23.59■■□□□ 1.37
KCNQ4-201ENST00000347132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.54■■□□□ 1.36
KCNQ4-201ENST00000347132 PELP1Q8IZL8 1130 aaKnown RBP23.47■■□□□ 1.35
KCNQ4-201ENST00000347132 UBTFP17480 764 aaKnown RBP23.45■■□□□ 1.34
KCNQ4-201ENST00000347132 YTHDC1Q96MU7 727 aaKnown RBP23.42■■□□□ 1.34
KCNQ4-201ENST00000347132 ABCC9O60706 1549 aa23.33■■□□□ 1.33
KCNQ4-201ENST00000347132 ZEB1P37275 1124 aaPredicted RBP23.3■■□□□ 1.32
KCNQ4-201ENST00000347132 HNRNPUL2Q1KMD3 747 aaKnown RBP23.17■■□□□ 1.3
KCNQ4-201ENST00000347132 APLP2Q06481 763 aa23.15■■□□□ 1.3
KCNQ4-201ENST00000347132 PABPN1Q86U42 306 aaKnown RBP eCLIP23.11■■□□□ 1.29
KCNQ4-201ENST00000347132 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
KCNQ4-201ENST00000347132 ITGAEP38570 1179 aa22.93■■□□□ 1.26
KCNQ4-201ENST00000347132 CENPBP07199 599 aaPredicted RBP22.92■■□□□ 1.26
KCNQ4-201ENST00000347132 DCAF1Q9Y4B6 1507 aa22.9■■□□□ 1.26
KCNQ4-201ENST00000347132 ATP1B4Q9UN42 357 aaPredicted RBP22.9■■□□□ 1.26
KCNQ4-201ENST00000347132 DIEXFQ68CQ4 756 aaKnown RBP22.87■■□□□ 1.25
KCNQ4-201ENST00000347132 CCDC180Q9P1Z9 1646 aa22.85■■□□□ 1.25
KCNQ4-201ENST00000347132 RSF1Q96T23 1441 aaPredicted RBP22.79■■□□□ 1.24
KCNQ4-201ENST00000347132 SCAF1Q9H7N4 1312 aaKnown RBP22.74■■□□□ 1.23
KCNQ4-201ENST00000347132 GTF3C3Q9Y5Q9 886 aa22.73■■□□□ 1.23
KCNQ4-201ENST00000347132 MYT1Q01538 1121 aa22.7■■□□□ 1.22
KCNQ4-201ENST00000347132 NEUROD1Q13562 356 aa22.61■■□□□ 1.21
KCNQ4-201ENST00000347132 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
KCNQ4-201ENST00000347132 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
KCNQ4-201ENST00000347132 CSRNP3Q8WYN3 585 aa22.49■■□□□ 1.19
KCNQ4-201ENST00000347132 ACIN1Q9UKV3 1341 aaKnown RBP22.48■■□□□ 1.19
KCNQ4-201ENST00000347132 ZNF316A6NFI3 1004 aaPredicted RBP22.34■■□□□ 1.17
KCNQ4-201ENST00000347132 CNGB1Q14028 1251 aaPredicted RBP22.31■■□□□ 1.16
KCNQ4-201ENST00000347132 P3H3Q8IVL6 736 aa22.25■■□□□ 1.15
KCNQ4-201ENST00000347132 BCANQ96GW7 911 aa22.25■■□□□ 1.15
KCNQ4-201ENST00000347132 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
KCNQ4-201ENST00000347132 MIER1Q8N108 512 aa22.24■■□□□ 1.15
KCNQ4-201ENST00000347132 SOGA1O94964 1423 aa22.19■■□□□ 1.14
KCNQ4-201ENST00000347132 FAM50AQ14320 339 aaKnown RBP22.16■■□□□ 1.14
KCNQ4-201ENST00000347132 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
KCNQ4-201ENST00000347132 CEP162Q5TB80 1403 aa22.14■■□□□ 1.13
KCNQ4-201ENST00000347132 CCDC88BA6NC98 1476 aa22.07■■□□□ 1.12
KCNQ4-201ENST00000347132 HIRIP3Q9BW71 556 aaPredicted RBP22.06■■□□□ 1.12
KCNQ4-201ENST00000347132 WIZO95785 1651 aa22.05■■□□□ 1.12
KCNQ4-201ENST00000347132 ERICH6Q7L0X2 663 aa22.04■■□□□ 1.12
KCNQ4-201ENST00000347132 ARID3CA6NKF2 412 aa22.01■■□□□ 1.11
KCNQ4-201ENST00000347132 RUSC2Q8N2Y8 1516 aa21.95■■□□□ 1.1
KCNQ4-201ENST00000347132 POLR3GLQ9BT43 218 aa21.95■■□□□ 1.1
KCNQ4-201ENST00000347132 CLIP1P30622 1438 aa21.88■■□□□ 1.09
KCNQ4-201ENST00000347132 NEFLP07196 543 aa21.84■■□□□ 1.09
KCNQ4-201ENST00000347132 DDX10Q13206 875 aaKnown RBP21.82■■□□□ 1.08
KCNQ4-201ENST00000347132 WRNQ14191 1432 aaPredicted RBP eCLIP21.79■■□□□ 1.08
KCNQ4-201ENST00000347132 TNIKQ9UKE5 1360 aa21.77■■□□□ 1.08
KCNQ4-201ENST00000347132 NACADO15069 1562 aa21.73■■□□□ 1.07
KCNQ4-201ENST00000347132 KANK4Q5T7N3 995 aaPredicted RBP21.72■■□□□ 1.07
KCNQ4-201ENST00000347132 TRIM52Q96A61 297 aa21.72■■□□□ 1.07
KCNQ4-201ENST00000347132 GOLGA3Q08378 1498 aa21.69■■□□□ 1.06
KCNQ4-201ENST00000347132 BAZ1AQ9NRL2 1556 aaPredicted RBP21.67■■□□□ 1.06
KCNQ4-201ENST00000347132 SENP3-EIF4A1A0A087X0R7 540 aa21.67■■□□□ 1.06
KCNQ4-201ENST00000347132 SIN3AQ96ST3 1273 aa21.64■■□□□ 1.05
KCNQ4-201ENST00000347132 FKBP8Q14318 412 aa21.62■■□□□ 1.05
KCNQ4-201ENST00000347132 IRX6P78412 446 aaPredicted RBP21.58■■□□□ 1.05
KCNQ4-201ENST00000347132 ZNF326Q5BKZ1 582 aaKnown RBP21.57■■□□□ 1.04
KCNQ4-201ENST00000347132 CHIC2Q9UKJ5 165 aa21.57■■□□□ 1.04
KCNQ4-201ENST00000347132 KCNH8Q96L42 1107 aa21.57■■□□□ 1.04
KCNQ4-201ENST00000347132 ANP32CO43423 234 aa21.48■■□□□ 1.03
KCNQ4-201ENST00000347132 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
KCNQ4-201ENST00000347132 BAZ1BQ9UIG0 1483 aaKnown RBP21.45■■□□□ 1.02
KCNQ4-201ENST00000347132 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.02
KCNQ4-201ENST00000347132 EEA1Q15075 1411 aa21.42■■□□□ 1.02
KCNQ4-201ENST00000347132 TOP2AP11388 1531 aaKnown RBP21.37■■□□□ 1.01
KCNQ4-201ENST00000347132 SUPT16HQ9Y5B9 1047 aaKnown RBP21.36■■□□□ 1.01
KCNQ4-201ENST00000347132 VPS8Q8N3P4 1428 aa21.35■■□□□ 1.01
KCNQ4-201ENST00000347132 FBLN2P98095 1184 aa21.35■■□□□ 1.01
KCNQ4-201ENST00000347132 HNRNPUQ00839 825 aaKnown RBP eCLIP21.35■■□□□ 1.01
KCNQ4-201ENST00000347132 RRP7BPQ9NSQ0 103 aa21.35■■□□□ 1.01
KCNQ4-201ENST00000347132 FAM9BQ8IZU0 186 aa21.3■■□□□ 1
KCNQ4-201ENST00000347132 ZNF777Q9ULD5 760 aaPredicted RBP21.29■■□□□ 1
KCNQ4-201ENST00000347132 SMARCA2P51531 1590 aa21.28■■□□□ 1
KCNQ4-201ENST00000347132 SMARCA4P51532 1647 aa21.28■■□□□ 1
KCNQ4-201ENST00000347132 TONSLQ96HA7 1378 aa21.26■□□□□ 0.99
KCNQ4-201ENST00000347132 SALL2Q9Y467 1007 aaPredicted RBP21.23■□□□□ 0.99
KCNQ4-201ENST00000347132 CCNB3Q8WWL7 1395 aa21.21■□□□□ 0.99
KCNQ4-201ENST00000347132 MYT1LQ9UL68 1186 aa21.18■□□□□ 0.98
KCNQ4-201ENST00000347132 KIF27Q86VH2 1401 aa21.17■□□□□ 0.98
KCNQ4-201ENST00000347132 DHX57Q6P158 1386 aaKnown RBP21.16■□□□□ 0.98
KCNQ4-201ENST00000347132 FOXD1Q16676 465 aa21.16■□□□□ 0.98
KCNQ4-201ENST00000347132 RAB3GAP2Q9H2M9 1393 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms