RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 NISCHQ9Y2I1 1504 aa32.37■■■□□ 2.77
TSEN54-206ENST00000579449 CCDC180Q9P1Z9 1646 aa28.46■■■□□ 2.15
TSEN54-206ENST00000579449 ABCC9O60706 1549 aa27.23■■□□□ 1.95
TSEN54-206ENST00000579449 ZCCHC6Q5VYS8 1495 aaKnown RBP27.11■■□□□ 1.93
TSEN54-206ENST00000579449 DCAF8L2P0C7V8 631 aa26.82■■□□□ 1.88
TSEN54-206ENST00000579449 DCAF1Q9Y4B6 1507 aa26.78■■□□□ 1.88
TSEN54-206ENST00000579449 MYO15BQ96JP2 1530 aa26.62■■□□□ 1.85
TSEN54-206ENST00000579449 NACADO15069 1562 aa26.58■■□□□ 1.85
TSEN54-206ENST00000579449 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
TSEN54-206ENST00000579449 SCRIBQ14160 1630 aa26.08■■□□□ 1.77
TSEN54-206ENST00000579449 SHROOM4Q9ULL8 1493 aa26.07■■□□□ 1.76
TSEN54-206ENST00000579449 UNC13AQ9UPW8 1703 aa25.95■■□□□ 1.74
TSEN54-206ENST00000579449 BICRAQ9NZM4 1560 aa25.66■■□□□ 1.7
TSEN54-206ENST00000579449 PABPN1Q86U42 306 aaKnown RBP eCLIP25.58■■□□□ 1.69
TSEN54-206ENST00000579449 CECR2Q9BXF3 1484 aa25.17■■□□□ 1.62
TSEN54-206ENST00000579449 BAZ1AQ9NRL2 1556 aaPredicted RBP25.03■■□□□ 1.6
TSEN54-206ENST00000579449 MROH2BQ7Z745 1585 aa24.99■■□□□ 1.59
TSEN54-206ENST00000579449 SMARCA4P51532 1647 aa24.98■■□□□ 1.59
TSEN54-206ENST00000579449 RSF1Q96T23 1441 aaPredicted RBP24.94■■□□□ 1.58
TSEN54-206ENST00000579449 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
TSEN54-206ENST00000579449 SUPT5HO00267 1087 aaKnown RBP24.87■■□□□ 1.57
TSEN54-206ENST00000579449 WIZO95785 1651 aa24.78■■□□□ 1.56
TSEN54-206ENST00000579449 PEG3Q9GZU2 1588 aa24.69■■□□□ 1.54
TSEN54-206ENST00000579449 ATAD2BQ9ULI0 1458 aa24.66■■□□□ 1.54
TSEN54-206ENST00000579449 CC2D2AQ9P2K1 1620 aa24.66■■□□□ 1.54
TSEN54-206ENST00000579449 SMARCA2P51531 1590 aa24.65■■□□□ 1.54
TSEN54-206ENST00000579449 NCAPD3P42695 1498 aa24.51■■□□□ 1.51
TSEN54-206ENST00000579449 TOP2AP11388 1531 aaKnown RBP24.51■■□□□ 1.51
TSEN54-206ENST00000579449 BAZ1BQ9UIG0 1483 aaKnown RBP24.5■■□□□ 1.51
TSEN54-206ENST00000579449 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
TSEN54-206ENST00000579449 DNAJC5BQ9UF47 199 aa24.39■■□□□ 1.49
TSEN54-206ENST00000579449 CCDC88BA6NC98 1476 aa24.24■■□□□ 1.47
TSEN54-206ENST00000579449 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
TSEN54-206ENST00000579449 AEBP2Q6ZN18 517 aaPredicted RBP24■■□□□ 1.43
TSEN54-206ENST00000579449 CADPSQ9ULU8 1353 aa23.86■■□□□ 1.41
TSEN54-206ENST00000579449 CFTRP13569 1480 aa23.86■■□□□ 1.41
TSEN54-206ENST00000579449 PRDM2Q13029 1718 aa23.79■■□□□ 1.4
TSEN54-206ENST00000579449 NESP48681 1621 aa23.78■■□□□ 1.4
TSEN54-206ENST00000579449 LAMC3Q9Y6N6 1575 aa23.78■■□□□ 1.4
TSEN54-206ENST00000579449 FANCD2Q9BXW9 1451 aa23.6■■□□□ 1.37
TSEN54-206ENST00000579449 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
TSEN54-206ENST00000579449 ABCC8Q09428 1581 aa23.58■■□□□ 1.37
TSEN54-206ENST00000579449 KIF21AQ7Z4S6 1674 aa23.54■■□□□ 1.36
TSEN54-206ENST00000579449 CEP164Q9UPV0 1460 aa23.49■■□□□ 1.35
TSEN54-206ENST00000579449 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.35
TSEN54-206ENST00000579449 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
TSEN54-206ENST00000579449 SYNJ1O43426 1573 aa23.41■■□□□ 1.34
TSEN54-206ENST00000579449 CUX1P39880 1505 aa23.4■■□□□ 1.34
TSEN54-206ENST00000579449 ERCC6Q03468 1493 aa23.4■■□□□ 1.34
TSEN54-206ENST00000579449 BIVM-ERCC5R4GMW8 1640 aa23.37■■□□□ 1.33
TSEN54-206ENST00000579449 TOP2BQ02880 1626 aa23.36■■□□□ 1.33
TSEN54-206ENST00000579449 URB2Q14146 1524 aaKnown RBP23.33■■□□□ 1.33
TSEN54-206ENST00000579449 DNMBPQ6XZF7 1577 aa23.33■■□□□ 1.33
TSEN54-206ENST00000579449 MRC2Q9UBG0 1479 aa23.31■■□□□ 1.32
TSEN54-206ENST00000579449 TOPBP1Q92547 1522 aa23.3■■□□□ 1.32
TSEN54-206ENST00000579449 THOC2Q8NI27 1593 aaKnown RBP23.25■■□□□ 1.31
TSEN54-206ENST00000579449 WDR62O43379 1518 aa23.21■■□□□ 1.31
TSEN54-206ENST00000579449 FGD5Q6ZNL6 1462 aa23.2■■□□□ 1.3
TSEN54-206ENST00000579449 POLA1P09884 1462 aaPredicted RBP23.15■■□□□ 1.3
TSEN54-206ENST00000579449 RAD54L2Q9Y4B4 1467 aa23.07■■□□□ 1.28
TSEN54-206ENST00000579449 SOGA1O94964 1423 aa23.07■■□□□ 1.28
TSEN54-206ENST00000579449 CUX2O14529 1486 aa23.03■■□□□ 1.28
TSEN54-206ENST00000579449 ABCA10Q8WWZ4 1543 aa23■■□□□ 1.27
TSEN54-206ENST00000579449 TARBP1Q13395 1621 aaKnown RBP23■■□□□ 1.27
TSEN54-206ENST00000579449 RUSC2Q8N2Y8 1516 aa22.99■■□□□ 1.27
TSEN54-206ENST00000579449 WDR97A6NE52 1622 aa22.98■■□□□ 1.27
TSEN54-206ENST00000579449 FAM9AQ8IZU1 332 aaPredicted RBP22.97■■□□□ 1.27
TSEN54-206ENST00000579449 IFT140Q96RY7 1462 aa22.97■■□□□ 1.27
TSEN54-206ENST00000579449 EEA1Q15075 1411 aa22.93■■□□□ 1.26
TSEN54-206ENST00000579449 KIF27Q86VH2 1401 aa22.93■■□□□ 1.26
TSEN54-206ENST00000579449 TDRD9Q8NDG6 1382 aaKnown RBP22.87■■□□□ 1.25
TSEN54-206ENST00000579449 ABCA5Q8WWZ7 1642 aa22.85■■□□□ 1.25
TSEN54-206ENST00000579449 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
TSEN54-206ENST00000579449 CSRNP3Q8WYN3 585 aa22.84■■□□□ 1.25
TSEN54-206ENST00000579449 GAPVD1Q14C86 1478 aa22.81■■□□□ 1.24
TSEN54-206ENST00000579449 AQRO60306 1485 aaKnown RBP eCLIP22.8■■□□□ 1.246e-6■■■■□ 23.2
TSEN54-206ENST00000579449 EIF4G3O43432 1585 aaKnown RBP22.77■■□□□ 1.24
TSEN54-206ENST00000579449 IGF1RP08069 1367 aa22.76■■□□□ 1.23
TSEN54-206ENST00000579449 PBRM1Q86U86 1689 aa22.75■■□□□ 1.23
TSEN54-206ENST00000579449 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
TSEN54-206ENST00000579449 GRIN2BQ13224 1484 aa22.7■■□□□ 1.22
TSEN54-206ENST00000579449 LOC105371045A0A1W2PR82 267 aa22.68■■□□□ 1.22
TSEN54-206ENST00000579449 KIF21BO75037 1637 aa22.68■■□□□ 1.22
TSEN54-206ENST00000579449 PRXQ9BXM0 1461 aa22.67■■□□□ 1.22
TSEN54-206ENST00000579449 CUL7Q14999 1698 aa22.66■■□□□ 1.22
TSEN54-206ENST00000579449 EHMT2Q96KQ7 1210 aa22.66■■□□□ 1.22
TSEN54-206ENST00000579449 CARMIL1Q5VZK9 1371 aa22.65■■□□□ 1.22
TSEN54-206ENST00000579449 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
TSEN54-206ENST00000579449 SNAPC4Q5SXM2 1469 aa22.6■■□□□ 1.21
TSEN54-206ENST00000579449 RAPGEF2Q9Y4G8 1499 aa22.6■■□□□ 1.21
TSEN54-206ENST00000579449 ADAMTS12P58397 1594 aa22.58■■□□□ 1.2
TSEN54-206ENST00000579449 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
TSEN54-206ENST00000579449 MAGI1Q96QZ7 1491 aaPredicted RBP22.56■■□□□ 1.2
TSEN54-206ENST00000579449 UBTFP17480 764 aaKnown RBP22.5■■□□□ 1.19
TSEN54-206ENST00000579449 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
TSEN54-206ENST00000579449 TNIKQ9UKE5 1360 aa22.45■■□□□ 1.18
TSEN54-206ENST00000579449 CHMP7Q8WUX9 453 aaPredicted RBP22.43■■□□□ 1.18
TSEN54-206ENST00000579449 GRIN2AQ12879 1464 aa22.41■■□□□ 1.18
TSEN54-206ENST00000579449 FBLN2P98095 1184 aa22.4■■□□□ 1.18
TSEN54-206ENST00000579449 CHD1O14646 1710 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms