RNA–Protein interactions for RNA: ENST00000562943.1

CENPN-206, Transcript of centromere protein N, humanhuman

TSL 2

Gene CENPN, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPN-206ENST00000562943 AEBP2Q6ZN18 517 aaPredicted RBP19.78■□□□□ 0.76
CENPN-206ENST00000562943 CHIC1Q5VXU3 224 aa18.74■□□□□ 0.59
CENPN-206ENST00000562943 NISCHQ9Y2I1 1504 aa17.47■□□□□ 0.39
CENPN-206ENST00000562943 SENP3Q9H4L4 574 aaPredicted RBP16.95■□□□□ 0.3
CENPN-206ENST00000562943 PHF23Q9BUL5 403 aaPredicted RBP16.72■□□□□ 0.27
CENPN-206ENST00000562943 ABCC9O60706 1549 aa15.91■□□□□ 0.14
CENPN-206ENST00000562943 CCDC180Q9P1Z9 1646 aa15.82■□□□□ 0.12
CENPN-206ENST00000562943 FOXD1Q16676 465 aa15.78■□□□□ 0.12
CENPN-206ENST00000562943 RB1CC1Q8TDY2 1594 aa15.11■□□□□ 0.01
CENPN-206ENST00000562943 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
CENPN-206ENST00000562943 PLPPR3Q6T4P5 718 aa15□□□□□ -0.01
CENPN-206ENST00000562943 NACADO15069 1562 aa14.95□□□□□ -0.02
CENPN-206ENST00000562943 MSH5O43196 834 aa14.82□□□□□ -0.04
CENPN-206ENST00000562943 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
CENPN-206ENST00000562943 UNC13AQ9UPW8 1703 aa14.8□□□□□ -0.04
CENPN-206ENST00000562943 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
CENPN-206ENST00000562943 DCAF8L2P0C7V8 631 aa14.7□□□□□ -0.06
CENPN-206ENST00000562943 ADRA2BP18089 450 aa14.7□□□□□ -0.06
CENPN-206ENST00000562943 MYO15BQ96JP2 1530 aa14.7□□□□□ -0.06
CENPN-206ENST00000562943 PPP6R1Q9UPN7 881 aa14.68□□□□□ -0.06
CENPN-206ENST00000562943 BICRAQ9NZM4 1560 aa14.68□□□□□ -0.06
CENPN-206ENST00000562943 POTEDQ86YR6 584 aa14.56□□□□□ -0.08
CENPN-206ENST00000562943 SHROOM4Q9ULL8 1493 aa14.49□□□□□ -0.09
CENPN-206ENST00000562943 ZCCHC6Q5VYS8 1495 aaKnown RBP14.45□□□□□ -0.1
CENPN-206ENST00000562943 DCAF1Q9Y4B6 1507 aa14.44□□□□□ -0.1
CENPN-206ENST00000562943 CC2D2AQ9P2K1 1620 aa14.4□□□□□ -0.1
CENPN-206ENST00000562943 SCRIBQ14160 1630 aa14.36□□□□□ -0.11
CENPN-206ENST00000562943 CECR2Q9BXF3 1484 aa14.36□□□□□ -0.11
CENPN-206ENST00000562943 EIF4G1Q04637 1599 aaKnown RBP14.32□□□□□ -0.12
CENPN-206ENST00000562943 DNAJC5Q9H3Z4 198 aa13.95□□□□□ -0.18
CENPN-206ENST00000562943 CUX2O14529 1486 aa13.81□□□□□ -0.2
CENPN-206ENST00000562943 NCAPD3P42695 1498 aa13.78□□□□□ -0.2
CENPN-206ENST00000562943 ERCC6Q03468 1493 aa13.75□□□□□ -0.21
CENPN-206ENST00000562943 ATAD2BQ9ULI0 1458 aa13.72□□□□□ -0.21
CENPN-206ENST00000562943 HMGXB3Q12766 1538 aa13.7□□□□□ -0.22
CENPN-206ENST00000562943 SMARCA4P51532 1647 aa13.69□□□□□ -0.22
CENPN-206ENST00000562943 SMARCA2P51531 1590 aa13.69□□□□□ -0.22
CENPN-206ENST00000562943 NESP48681 1621 aa13.62□□□□□ -0.23
CENPN-206ENST00000562943 BAZ1AQ9NRL2 1556 aaPredicted RBP13.58□□□□□ -0.23
CENPN-206ENST00000562943 BAZ1BQ9UIG0 1483 aaKnown RBP13.58□□□□□ -0.24
CENPN-206ENST00000562943 THOC2Q8NI27 1593 aaKnown RBP13.58□□□□□ -0.24
CENPN-206ENST00000562943 PEG3Q9GZU2 1588 aa13.57□□□□□ -0.24
CENPN-206ENST00000562943 LAMC3Q9Y6N6 1575 aa13.53□□□□□ -0.24
CENPN-206ENST00000562943 MAPK8IP2Q13387 824 aaPredicted RBP13.51□□□□□ -0.25
CENPN-206ENST00000562943 KIF21AQ7Z4S6 1674 aa13.49□□□□□ -0.25
CENPN-206ENST00000562943 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
CENPN-206ENST00000562943 MROH2BQ7Z745 1585 aa13.45□□□□□ -0.26
CENPN-206ENST00000562943 PDS5BQ9NTI5 1447 aa13.42□□□□□ -0.26
CENPN-206ENST00000562943 DMRT2Q9Y5R5 561 aa13.39□□□□□ -0.27
CENPN-206ENST00000562943 MRC2Q9UBG0 1479 aa13.34□□□□□ -0.27
CENPN-206ENST00000562943 WDR62O43379 1518 aa13.34□□□□□ -0.27
CENPN-206ENST00000562943 CADPSQ9ULU8 1353 aa13.33□□□□□ -0.27
CENPN-206ENST00000562943 WIZO95785 1651 aa13.3□□□□□ -0.28
CENPN-206ENST00000562943 CEP164Q9UPV0 1460 aa13.25□□□□□ -0.29
CENPN-206ENST00000562943 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
CENPN-206ENST00000562943 FANCD2Q9BXW9 1451 aa13.21□□□□□ -0.3
CENPN-206ENST00000562943 CFTRP13569 1480 aa13.17□□□□□ -0.3
CENPN-206ENST00000562943 PPP4R3CPQ6ZMV5 832 aa13.13□□□□□ -0.31
CENPN-206ENST00000562943 TOP2AP11388 1531 aaKnown RBP13.13□□□□□ -0.31
CENPN-206ENST00000562943 URB2Q14146 1524 aaKnown RBP13.12□□□□□ -0.31
CENPN-206ENST00000562943 PRDM2Q13029 1718 aa13.11□□□□□ -0.31
CENPN-206ENST00000562943 RSF1Q96T23 1441 aaPredicted RBP13.08□□□□□ -0.32
CENPN-206ENST00000562943 OSCARQ8IYS5 282 aa13.08□□□□□ -0.32
CENPN-206ENST00000562943 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
CENPN-206ENST00000562943 RIMBP3CA6NJZ7 1639 aa13.02□□□□□ -0.33
CENPN-206ENST00000562943 RIMBP3BA6NNM3 1639 aa13.02□□□□□ -0.33
CENPN-206ENST00000562943 RIMBP3Q9UFD9 1639 aa13.02□□□□□ -0.33
CENPN-206ENST00000562943 IFT140Q96RY7 1462 aa12.98□□□□□ -0.33
CENPN-206ENST00000562943 ZNF608Q9ULD9 1512 aaPredicted RBP12.98□□□□□ -0.33
CENPN-206ENST00000562943 ARHGEF11O15085 1522 aa12.94□□□□□ -0.34
CENPN-206ENST00000562943 TOPBP1Q92547 1522 aa12.94□□□□□ -0.34
CENPN-206ENST00000562943 EIF4G3O43432 1585 aaKnown RBP12.94□□□□□ -0.34
CENPN-206ENST00000562943 CCDC88BA6NC98 1476 aa12.93□□□□□ -0.34
CENPN-206ENST00000562943 DNMBPQ6XZF7 1577 aa12.9□□□□□ -0.34
CENPN-206ENST00000562943 ABCC8Q09428 1581 aa12.9□□□□□ -0.35
CENPN-206ENST00000562943 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
CENPN-206ENST00000562943 CHD1O14646 1710 aa12.88□□□□□ -0.35
CENPN-206ENST00000562943 TARBP1Q13395 1621 aaKnown RBP12.87□□□□□ -0.35
CENPN-206ENST00000562943 CACNB1Q02641 598 aaPredicted RBP12.84□□□□□ -0.35
CENPN-206ENST00000562943 HOXD11P31277 338 aaPredicted RBP12.83□□□□□ -0.36
CENPN-206ENST00000562943 AQRO60306 1485 aaKnown RBP eCLIP12.8□□□□□ -0.362e-6■■■□□ 18.3
CENPN-206ENST00000562943 POLA1P09884 1462 aaPredicted RBP12.8□□□□□ -0.36
CENPN-206ENST00000562943 ARAP1Q96P48 1450 aa12.8□□□□□ -0.36
CENPN-206ENST00000562943 CYB5RLQ6IPT4 315 aa12.78□□□□□ -0.36
CENPN-206ENST00000562943 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
CENPN-206ENST00000562943 WDR97A6NE52 1622 aa12.74□□□□□ -0.37
CENPN-206ENST00000562943 RAD54L2Q9Y4B4 1467 aa12.72□□□□□ -0.37
CENPN-206ENST00000562943 FBLN2P98095 1184 aa12.72□□□□□ -0.37
CENPN-206ENST00000562943 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
CENPN-206ENST00000562943 SNAPC4Q5SXM2 1469 aa12.71□□□□□ -0.38
CENPN-206ENST00000562943 SOGA1O94964 1423 aa12.7□□□□□ -0.38
CENPN-206ENST00000562943 TDRD9Q8NDG6 1382 aaKnown RBP12.69□□□□□ -0.38
CENPN-206ENST00000562943 TRHP20396 242 aaPredicted RBP12.69□□□□□ -0.38
CENPN-206ENST00000562943 FGD5Q6ZNL6 1462 aa12.69□□□□□ -0.38
CENPN-206ENST00000562943 SYNJ1O43426 1573 aa12.69□□□□□ -0.38
CENPN-206ENST00000562943 MAGI1Q96QZ7 1491 aaPredicted RBP12.67□□□□□ -0.38
CENPN-206ENST00000562943 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
CENPN-206ENST00000562943 CUX1P39880 1505 aa12.66□□□□□ -0.38
CENPN-206ENST00000562943 GRIN2BQ13224 1484 aa12.64□□□□□ -0.39
CENPN-206ENST00000562943 PBRM1Q86U86 1689 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms