RNA–Protein interactions for RNA: ENST00000616442.4

CWC15-205, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

TSL 2

Gene CWC15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-205ENST00000616442 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
CWC15-205ENST00000616442 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
CWC15-205ENST00000616442 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
CWC15-205ENST00000616442 PHF23Q9BUL5 403 aaPredicted RBP17.12■□□□□ 0.33
CWC15-205ENST00000616442 FOXD1Q16676 465 aa16.2■□□□□ 0.18
CWC15-205ENST00000616442 POTEDQ86YR6 584 aa15.4■□□□□ 0.06
CWC15-205ENST00000616442 MSH5O43196 834 aa15.35■□□□□ 0.05
CWC15-205ENST00000616442 PIAS4Q8N2W9 510 aaPredicted RBP15.12■□□□□ 0.01
CWC15-205ENST00000616442 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
CWC15-205ENST00000616442 PPP6R1Q9UPN7 881 aa14.92□□□□□ -0.02
CWC15-205ENST00000616442 ADRA2BP18089 450 aa14.88□□□□□ -0.03
CWC15-205ENST00000616442 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
CWC15-205ENST00000616442 MAPK8IP2Q13387 824 aaPredicted RBP13.73□□□□□ -0.21
CWC15-205ENST00000616442 SCAF1Q9H7N4 1312 aaKnown RBP13.71□□□□□ -0.21
CWC15-205ENST00000616442 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
CWC15-205ENST00000616442 DCAF8L1A6NGE4 600 aa13.24□□□□□ -0.29
CWC15-205ENST00000616442 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
CWC15-205ENST00000616442 HOXD11P31277 338 aaPredicted RBP13.12□□□□□ -0.31
CWC15-205ENST00000616442 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
CWC15-205ENST00000616442 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
CWC15-205ENST00000616442 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
CWC15-205ENST00000616442 C1QBPQ07021 282 aaKnown RBP12.86□□□□□ -0.35
CWC15-205ENST00000616442 DNAJC5BQ9UF47 199 aa12.76□□□□□ -0.37
CWC15-205ENST00000616442 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
CWC15-205ENST00000616442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.55□□□□□ -0.41e-7■■□□□ 12.9
CWC15-205ENST00000616442 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
CWC15-205ENST00000616442 U3KPZ7 1027 aaPredicted RBP12.19□□□□□ -0.46
CWC15-205ENST00000616442 CAPN15O75808 1086 aa12.15□□□□□ -0.46
CWC15-205ENST00000616442 DSG3P32926 999 aa12.11□□□□□ -0.47
CWC15-205ENST00000616442 SPINK5Q9NQ38 1064 aaPredicted RBP12.09□□□□□ -0.47
CWC15-205ENST00000616442 POTEHQ6S545 545 aa12.04□□□□□ -0.48
CWC15-205ENST00000616442 KCNA4P22459 653 aa11.99□□□□□ -0.49
CWC15-205ENST00000616442 APLP2Q06481 763 aa11.95□□□□□ -0.5
CWC15-205ENST00000616442 SLC4A2P04920 1241 aa11.88□□□□□ -0.51
CWC15-205ENST00000616442 TRHP20396 242 aaPredicted RBP11.88□□□□□ -0.51
CWC15-205ENST00000616442 ZNF219Q9P2Y4 722 aaPredicted RBP11.87□□□□□ -0.51
CWC15-205ENST00000616442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.85□□□□□ -0.51
CWC15-205ENST00000616442 HNRNPUL2Q1KMD3 747 aaKnown RBP11.85□□□□□ -0.51
CWC15-205ENST00000616442 ABCB7O75027 752 aa11.8□□□□□ -0.52
CWC15-205ENST00000616442 SAMD1Q6SPF0 538 aaPredicted RBP11.74□□□□□ -0.53
CWC15-205ENST00000616442 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
CWC15-205ENST00000616442 MYCNP04198 464 aaPredicted RBP11.51□□□□□ -0.57
CWC15-205ENST00000616442 POLA2Q14181 598 aa11.48□□□□□ -0.57
CWC15-205ENST00000616442 CHRDL2Q6WN34 429 aa11.44□□□□□ -0.58
CWC15-205ENST00000616442 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
CWC15-205ENST00000616442 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
CWC15-205ENST00000616442 AKT1S1Q96B36 256 aa11.27□□□□□ -0.61
CWC15-205ENST00000616442 FOXD4L1Q9NU39 408 aa11.23□□□□□ -0.61
CWC15-205ENST00000616442 ATF5Q9Y2D1 282 aaPredicted RBP11.19□□□□□ -0.62
CWC15-205ENST00000616442 SP7Q8TDD2 431 aaPredicted RBP11.16□□□□□ -0.62
CWC15-205ENST00000616442 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
CWC15-205ENST00000616442 OSCARQ8IYS5 282 aa11.11□□□□□ -0.63
CWC15-205ENST00000616442 PIP4P2Q8N4L2 257 aa11.09□□□□□ -0.63
CWC15-205ENST00000616442 PITPNM1O00562 1244 aa11.01□□□□□ -0.65
CWC15-205ENST00000616442 HAX1O00165 279 aa11□□□□□ -0.65
CWC15-205ENST00000616442 ZBTB22O15209 634 aa10.99□□□□□ -0.65
CWC15-205ENST00000616442 FXR2P51116 673 aaKnown RBP eCLIP10.98□□□□□ -0.65
CWC15-205ENST00000616442 ATXN8OSP0DMR3 200 aa10.93□□□□□ -0.66
CWC15-205ENST00000616442 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
CWC15-205ENST00000616442 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
CWC15-205ENST00000616442 FBLN2P98095 1184 aa10.88□□□□□ -0.67
CWC15-205ENST00000616442 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
CWC15-205ENST00000616442 SPDYE1Q8NFV5 336 aaPredicted RBP10.77□□□□□ -0.69
CWC15-205ENST00000616442 EVX2Q03828 476 aa10.76□□□□□ -0.69
CWC15-205ENST00000616442 CLEC11AQ9Y240 323 aa10.76□□□□□ -0.69
CWC15-205ENST00000616442 PRKAR2AP13861 404 aaKnown RBP10.75□□□□□ -0.69
CWC15-205ENST00000616442 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.69
CWC15-205ENST00000616442 SSUH2Q9Y2M2 353 aa10.67□□□□□ -0.7
CWC15-205ENST00000616442 MKRN4PQ13434 485 aaPredicted RBP10.66□□□□□ -0.7
CWC15-205ENST00000616442 CSRNP3Q8WYN3 585 aa10.65□□□□□ -0.7
CWC15-205ENST00000616442 EHMT2Q96KQ7 1210 aa10.65□□□□□ -0.7
CWC15-205ENST00000616442 C19orf67A6NJJ6 358 aa10.64□□□□□ -0.71
CWC15-205ENST00000616442 GABBR2O75899 941 aa10.55□□□□□ -0.72
CWC15-205ENST00000616442 PRR29P0C7W0 189 aa10.55□□□□□ -0.72
CWC15-205ENST00000616442 CHADLQ6NUI6 762 aa10.54□□□□□ -0.72
CWC15-205ENST00000616442 PABPN1Q86U42 306 aaKnown RBP eCLIP10.53□□□□□ -0.72
CWC15-205ENST00000616442 LHX8Q68G74 356 aa10.47□□□□□ -0.73
CWC15-205ENST00000616442 CD44P16070 742 aaKnown RBP10.4□□□□□ -0.74
CWC15-205ENST00000616442 FARP1Q9Y4F1 1045 aaPredicted RBP10.38□□□□□ -0.75
CWC15-205ENST00000616442 CLCN6P51797 869 aa10.37□□□□□ -0.75
CWC15-205ENST00000616442 POTEIP0CG38 1075 aa10.28□□□□□ -0.76
CWC15-205ENST00000616442 DCBLD2Q96PD2 775 aa10.26□□□□□ -0.77
CWC15-205ENST00000616442 STAG3Q9UJ98 1225 aa10.23□□□□□ -0.77
CWC15-205ENST00000616442 ZNF579Q8NAF0 562 aaKnown RBP10.21□□□□□ -0.77
CWC15-205ENST00000616442 ZRANB1Q9UGI0 708 aa10.21□□□□□ -0.77
CWC15-205ENST00000616442 CREBZFQ9NS37 354 aa10.17□□□□□ -0.78
CWC15-205ENST00000616442 PAK3O75914 559 aaPredicted RBP10.12□□□□□ -0.79
CWC15-205ENST00000616442 GALR2O43603 387 aaPredicted RBP10.09□□□□□ -0.79
CWC15-205ENST00000616442 SPDYE4A6NLX3 237 aa10.08□□□□□ -0.8
CWC15-205ENST00000616442 NPM1P06748 294 aaKnown RBP eCLIP10.06□□□□□ -0.8
CWC15-205ENST00000616442 PLSCR2Q9NRY7 297 aa10.04□□□□□ -0.8
CWC15-205ENST00000616442 PHF12Q96QT6 1004 aa10□□□□□ -0.81
CWC15-205ENST00000616442 OTUD5Q96G74 571 aa9.98□□□□□ -0.81
CWC15-205ENST00000616442 POTEB2H3BUK9 544 aa9.94□□□□□ -0.82
CWC15-205ENST00000616442 MNX1P50219 401 aaPredicted RBP9.93□□□□□ -0.82
CWC15-205ENST00000616442 PELP1Q8IZL8 1130 aaKnown RBP9.89□□□□□ -0.83
CWC15-205ENST00000616442 POTEMA6NI47 508 aa9.87□□□□□ -0.83
CWC15-205ENST00000616442 ASTLQ6HA08 431 aaPredicted RBP9.87□□□□□ -0.83
CWC15-205ENST00000616442 SLC39A7Q92504 469 aa9.87□□□□□ -0.83
CWC15-205ENST00000616442 MS4A3Q96HJ5 214 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms