RNA–Protein interactions for RNA: ENST00000453152.1

TRIM50-202, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM50, Length 1,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-202ENST00000453152 NISCHQ9Y2I1 1504 aa38.24■■■■□ 3.71
TRIM50-202ENST00000453152 CCDC180Q9P1Z9 1646 aa34.03■■■■□ 3.04
TRIM50-202ENST00000453152 ABCC9O60706 1549 aa33.63■■■□□ 2.97
TRIM50-202ENST00000453152 RB1CC1Q8TDY2 1594 aa32.18■■■□□ 2.74
TRIM50-202ENST00000453152 NACADO15069 1562 aa32.1■■■□□ 2.73
TRIM50-202ENST00000453152 DCAF8L2P0C7V8 631 aa32.04■■■□□ 2.72
TRIM50-202ENST00000453152 MYO15BQ96JP2 1530 aa31.86■■■□□ 2.69
TRIM50-202ENST00000453152 ZCCHC6Q5VYS8 1495 aaKnown RBP31.8■■■□□ 2.68
TRIM50-202ENST00000453152 DCAF1Q9Y4B6 1507 aa31.62■■■□□ 2.65
TRIM50-202ENST00000453152 PABPN1Q86U42 306 aaKnown RBP eCLIP31.42■■■□□ 2.62
TRIM50-202ENST00000453152 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
TRIM50-202ENST00000453152 BICRAQ9NZM4 1560 aa31.28■■■□□ 2.6
TRIM50-202ENST00000453152 DNAJC5BQ9UF47 199 aa31.22■■■□□ 2.59
TRIM50-202ENST00000453152 SCRIBQ14160 1630 aa31.05■■■□□ 2.56
TRIM50-202ENST00000453152 SHROOM4Q9ULL8 1493 aa30.9■■■□□ 2.54
TRIM50-202ENST00000453152 EIF4G1Q04637 1599 aaKnown RBP30.45■■■□□ 2.47
TRIM50-202ENST00000453152 CC2D2AQ9P2K1 1620 aa30.39■■■□□ 2.45
TRIM50-202ENST00000453152 CECR2Q9BXF3 1484 aa30.25■■■□□ 2.43
TRIM50-202ENST00000453152 SMARCA4P51532 1647 aa29.69■■■□□ 2.34
TRIM50-202ENST00000453152 NCAPD3P42695 1498 aa29.69■■■□□ 2.34
TRIM50-202ENST00000453152 ATAD2BQ9ULI0 1458 aa29.66■■■□□ 2.34
TRIM50-202ENST00000453152 BAZ1AQ9NRL2 1556 aaPredicted RBP29.62■■■□□ 2.33
TRIM50-202ENST00000453152 SMARCA2P51531 1590 aa29.55■■■□□ 2.32
TRIM50-202ENST00000453152 MROH2BQ7Z745 1585 aa29.47■■■□□ 2.31
TRIM50-202ENST00000453152 HMGXB3Q12766 1538 aa29.47■■■□□ 2.31
TRIM50-202ENST00000453152 PEG3Q9GZU2 1588 aa29.44■■■□□ 2.3
TRIM50-202ENST00000453152 BAZ1BQ9UIG0 1483 aaKnown RBP29.35■■■□□ 2.29
TRIM50-202ENST00000453152 WIZO95785 1651 aa29.09■■■□□ 2.25
TRIM50-202ENST00000453152 RSF1Q96T23 1441 aaPredicted RBP29.06■■■□□ 2.24
TRIM50-202ENST00000453152 NESP48681 1621 aa29.04■■■□□ 2.24
TRIM50-202ENST00000453152 ERCC6Q03468 1493 aa28.97■■■□□ 2.23
TRIM50-202ENST00000453152 LAMC3Q9Y6N6 1575 aa28.88■■■□□ 2.21
TRIM50-202ENST00000453152 CADPSQ9ULU8 1353 aa28.8■■■□□ 2.2
TRIM50-202ENST00000453152 CUX2O14529 1486 aa28.8■■■□□ 2.2
TRIM50-202ENST00000453152 TOP2AP11388 1531 aaKnown RBP28.78■■■□□ 2.2
TRIM50-202ENST00000453152 PDS5BQ9NTI5 1447 aa28.73■■■□□ 2.19
TRIM50-202ENST00000453152 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
TRIM50-202ENST00000453152 KIF21AQ7Z4S6 1674 aa28.6■■■□□ 2.17
TRIM50-202ENST00000453152 CFTRP13569 1480 aa28.57■■■□□ 2.16
TRIM50-202ENST00000453152 CCDC88BA6NC98 1476 aa28.49■■■□□ 2.15
TRIM50-202ENST00000453152 FANCD2Q9BXW9 1451 aa28.45■■■□□ 2.14
TRIM50-202ENST00000453152 MRC2Q9UBG0 1479 aa28.44■■■□□ 2.14
TRIM50-202ENST00000453152 CEP164Q9UPV0 1460 aa28.41■■■□□ 2.14
TRIM50-202ENST00000453152 WDR62O43379 1518 aa28.36■■■□□ 2.13
TRIM50-202ENST00000453152 DNAJC5Q9H3Z4 198 aa28.28■■■□□ 2.12
TRIM50-202ENST00000453152 URB2Q14146 1524 aaKnown RBP28.2■■■□□ 2.1
TRIM50-202ENST00000453152 PRDM2Q13029 1718 aa28.19■■■□□ 2.1
TRIM50-202ENST00000453152 SUPT5HO00267 1087 aaKnown RBP28.09■■■□□ 2.09
TRIM50-202ENST00000453152 TOPBP1Q92547 1522 aa27.96■■■□□ 2.07
TRIM50-202ENST00000453152 ABCC8Q09428 1581 aa27.92■■■□□ 2.06
TRIM50-202ENST00000453152 DNMBPQ6XZF7 1577 aa27.87■■■□□ 2.05
TRIM50-202ENST00000453152 IFT140Q96RY7 1462 aa27.84■■■□□ 2.05
TRIM50-202ENST00000453152 ZNF608Q9ULD9 1512 aaPredicted RBP27.77■■■□□ 2.04
TRIM50-202ENST00000453152 POLA1P09884 1462 aaPredicted RBP27.72■■■□□ 2.03
TRIM50-202ENST00000453152 TARBP1Q13395 1621 aaKnown RBP27.66■■■□□ 2.02
TRIM50-202ENST00000453152 CUX1P39880 1505 aa27.65■■■□□ 2.02
TRIM50-202ENST00000453152 RAD54L2Q9Y4B4 1467 aa27.61■■■□□ 2.01
TRIM50-202ENST00000453152 SOGA1O94964 1423 aa27.6■■■□□ 2.01
TRIM50-202ENST00000453152 FGD5Q6ZNL6 1462 aa27.59■■■□□ 2.01
TRIM50-202ENST00000453152 AQRO60306 1485 aaKnown RBP eCLIP27.58■■■□□ 2.014e-8■■■■■ 31.9
TRIM50-202ENST00000453152 EIF4G3O43432 1585 aaKnown RBP27.58■■■□□ 2.01
TRIM50-202ENST00000453152 OSCARQ8IYS5 282 aa27.58■■■□□ 2.01
TRIM50-202ENST00000453152 TDRD9Q8NDG6 1382 aaKnown RBP27.49■■□□□ 1.99
TRIM50-202ENST00000453152 WDR97A6NE52 1622 aa27.39■■□□□ 1.98
TRIM50-202ENST00000453152 WRNQ14191 1432 aaPredicted RBP eCLIP27.37■■□□□ 1.97
TRIM50-202ENST00000453152 ABCA10Q8WWZ4 1543 aa27.33■■□□□ 1.97
TRIM50-202ENST00000453152 TOP2BQ02880 1626 aa27.31■■□□□ 1.96
TRIM50-202ENST00000453152 SYNJ1O43426 1573 aa27.3■■□□□ 1.96
TRIM50-202ENST00000453152 GRIN2BQ13224 1484 aa27.29■■□□□ 1.96
TRIM50-202ENST00000453152 SNAPC4Q5SXM2 1469 aa27.29■■□□□ 1.96
TRIM50-202ENST00000453152 BIVM-ERCC5R4GMW8 1640 aa27.29■■□□□ 1.96
TRIM50-202ENST00000453152 FBLN2P98095 1184 aa27.27■■□□□ 1.96
TRIM50-202ENST00000453152 GAPVD1Q14C86 1478 aa27.26■■□□□ 1.95
TRIM50-202ENST00000453152 CHD1O14646 1710 aa27.25■■□□□ 1.95
TRIM50-202ENST00000453152 MAGI1Q96QZ7 1491 aaPredicted RBP27.24■■□□□ 1.95
TRIM50-202ENST00000453152 ABCA5Q8WWZ7 1642 aa27.2■■□□□ 1.95
TRIM50-202ENST00000453152 TRIM41Q8WV44 630 aa27.18■■□□□ 1.94
TRIM50-202ENST00000453152 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
TRIM50-202ENST00000453152 SYNJ2O15056 1496 aa27.14■■□□□ 1.94
TRIM50-202ENST00000453152 PBRM1Q86U86 1689 aa27.13■■□□□ 1.93
TRIM50-202ENST00000453152 ARHGEF11O15085 1522 aa27.11■■□□□ 1.93
TRIM50-202ENST00000453152 RIMBP3CA6NJZ7 1639 aa27.11■■□□□ 1.93
TRIM50-202ENST00000453152 RIMBP3BA6NNM3 1639 aa27.11■■□□□ 1.93
TRIM50-202ENST00000453152 RIMBP3Q9UFD9 1639 aa27.11■■□□□ 1.93
TRIM50-202ENST00000453152 CLASP1Q7Z460 1538 aa27.03■■□□□ 1.92
TRIM50-202ENST00000453152 ERICH3Q5RHP9 1530 aa26.97■■□□□ 1.91
TRIM50-202ENST00000453152 ADAMTS12P58397 1594 aa26.97■■□□□ 1.91
TRIM50-202ENST00000453152 FHAD1B1AJZ9 1412 aa26.94■■□□□ 1.9
TRIM50-202ENST00000453152 GRIN2AQ12879 1464 aa26.94■■□□□ 1.9
TRIM50-202ENST00000453152 CYB5RLQ6IPT4 315 aa26.9■■□□□ 1.9
TRIM50-202ENST00000453152 ARAP1Q96P48 1450 aa26.9■■□□□ 1.9
TRIM50-202ENST00000453152 NUP160Q12769 1436 aa26.86■■□□□ 1.89
TRIM50-202ENST00000453152 KIF27Q86VH2 1401 aa26.82■■□□□ 1.88
TRIM50-202ENST00000453152 CEP170Q5SW79 1584 aa26.82■■□□□ 1.88
TRIM50-202ENST00000453152 IGF1RP08069 1367 aa26.8■■□□□ 1.88
TRIM50-202ENST00000453152 ERCC6L2Q5T890 1561 aa26.65■■□□□ 1.86
TRIM50-202ENST00000453152 SHROOM2Q13796 1616 aa26.65■■□□□ 1.86
TRIM50-202ENST00000453152 CUL7Q14999 1698 aa26.62■■□□□ 1.85
TRIM50-202ENST00000453152 CARMIL1Q5VZK9 1371 aa26.6■■□□□ 1.85
TRIM50-202ENST00000453152 JPH4Q96JJ6 628 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms