RNA–Protein interactions for RNA: ENST00000536443.1

OTUB1-207, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 3

Gene OTUB1, Length 553 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-207ENST00000536443 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.42
OTUB1-207ENST00000536443 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
OTUB1-207ENST00000536443 ABCC9O60706 1549 aa20.73■□□□□ 0.91
OTUB1-207ENST00000536443 NACADO15069 1562 aa19.99■□□□□ 0.79
OTUB1-207ENST00000536443 RB1CC1Q8TDY2 1594 aa19.99■□□□□ 0.79
OTUB1-207ENST00000536443 DCAF8L2P0C7V8 631 aa19.93■□□□□ 0.78
OTUB1-207ENST00000536443 ZCCHC6Q5VYS8 1495 aaKnown RBP19.91■□□□□ 0.78
OTUB1-207ENST00000536443 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
OTUB1-207ENST00000536443 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
OTUB1-207ENST00000536443 UNC13AQ9UPW8 1703 aa19.48■□□□□ 0.71
OTUB1-207ENST00000536443 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.691e-6■■■■□ 24.5
OTUB1-207ENST00000536443 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
OTUB1-207ENST00000536443 SCRIBQ14160 1630 aa19.33■□□□□ 0.68
OTUB1-207ENST00000536443 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
OTUB1-207ENST00000536443 DNAJC5BQ9UF47 199 aa19.05■□□□□ 0.64
OTUB1-207ENST00000536443 AEBP2Q6ZN18 517 aaPredicted RBP19.03■□□□□ 0.64
OTUB1-207ENST00000536443 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
OTUB1-207ENST00000536443 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
OTUB1-207ENST00000536443 CC2D2AQ9P2K1 1620 aa18.77■□□□□ 0.6
OTUB1-207ENST00000536443 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
OTUB1-207ENST00000536443 BAZ1AQ9NRL2 1556 aaPredicted RBP18.52■□□□□ 0.56
OTUB1-207ENST00000536443 SMARCA4P51532 1647 aa18.52■□□□□ 0.55
OTUB1-207ENST00000536443 NCAPD3P42695 1498 aa18.46■□□□□ 0.54
OTUB1-207ENST00000536443 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
OTUB1-207ENST00000536443 SMARCA2P51531 1590 aa18.42■□□□□ 0.54
OTUB1-207ENST00000536443 MROH2BQ7Z745 1585 aa18.4■□□□□ 0.54
OTUB1-207ENST00000536443 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
OTUB1-207ENST00000536443 HMGXB3Q12766 1538 aa18.34■□□□□ 0.53
OTUB1-207ENST00000536443 BAZ1BQ9UIG0 1483 aaKnown RBP18.27■□□□□ 0.52
OTUB1-207ENST00000536443 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
OTUB1-207ENST00000536443 WIZO95785 1651 aa18.18■□□□□ 0.5
OTUB1-207ENST00000536443 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.47
OTUB1-207ENST00000536443 NESP48681 1621 aa17.94■□□□□ 0.46
OTUB1-207ENST00000536443 LAMC3Q9Y6N6 1575 aa17.94■□□□□ 0.46
OTUB1-207ENST00000536443 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
OTUB1-207ENST00000536443 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
OTUB1-207ENST00000536443 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.45
OTUB1-207ENST00000536443 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
OTUB1-207ENST00000536443 CFTRP13569 1480 aa17.8■□□□□ 0.44
OTUB1-207ENST00000536443 CUX2O14529 1486 aa17.73■□□□□ 0.43
OTUB1-207ENST00000536443 SUPT5HO00267 1087 aaKnown RBP17.72■□□□□ 0.43
OTUB1-207ENST00000536443 KIF21AQ7Z4S6 1674 aa17.71■□□□□ 0.43
OTUB1-207ENST00000536443 THOC2Q8NI27 1593 aaKnown RBP17.68■□□□□ 0.42
OTUB1-207ENST00000536443 FANCD2Q9BXW9 1451 aa17.68■□□□□ 0.42
OTUB1-207ENST00000536443 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
OTUB1-207ENST00000536443 MRC2Q9UBG0 1479 aa17.63■□□□□ 0.41
OTUB1-207ENST00000536443 PRDM2Q13029 1718 aa17.61■□□□□ 0.41
OTUB1-207ENST00000536443 WDR62O43379 1518 aa17.57■□□□□ 0.4
OTUB1-207ENST00000536443 URB2Q14146 1524 aaKnown RBP17.49■□□□□ 0.39
OTUB1-207ENST00000536443 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
OTUB1-207ENST00000536443 TOPBP1Q92547 1522 aa17.4■□□□□ 0.38
OTUB1-207ENST00000536443 DNMBPQ6XZF7 1577 aa17.37■□□□□ 0.37
OTUB1-207ENST00000536443 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
OTUB1-207ENST00000536443 CUX1P39880 1505 aa17.26■□□□□ 0.35
OTUB1-207ENST00000536443 POLA1P09884 1462 aaPredicted RBP17.24■□□□□ 0.35
OTUB1-207ENST00000536443 FGD5Q6ZNL6 1462 aa17.2■□□□□ 0.34
OTUB1-207ENST00000536443 SOGA1O94964 1423 aa17.2■□□□□ 0.34
OTUB1-207ENST00000536443 TARBP1Q13395 1621 aaKnown RBP17.19■□□□□ 0.34
OTUB1-207ENST00000536443 DNAJC5Q9H3Z4 198 aa17.19■□□□□ 0.34
OTUB1-207ENST00000536443 ZNF608Q9ULD9 1512 aaPredicted RBP17.19■□□□□ 0.34
OTUB1-207ENST00000536443 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
OTUB1-207ENST00000536443 RAD54L2Q9Y4B4 1467 aa17.16■□□□□ 0.34
OTUB1-207ENST00000536443 TOP2BQ02880 1626 aa17.12■□□□□ 0.33
OTUB1-207ENST00000536443 BIVM-ERCC5R4GMW8 1640 aa17.11■□□□□ 0.33
OTUB1-207ENST00000536443 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
OTUB1-207ENST00000536443 WDR97A6NE52 1622 aa17.1■□□□□ 0.33
OTUB1-207ENST00000536443 AQRO60306 1485 aaKnown RBP eCLIP17.1■□□□□ 0.338e-6■■■■□ 23.2
OTUB1-207ENST00000536443 SYNJ1O43426 1573 aa17.08■□□□□ 0.32
OTUB1-207ENST00000536443 TDRD9Q8NDG6 1382 aaKnown RBP17.07■□□□□ 0.32
OTUB1-207ENST00000536443 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
OTUB1-207ENST00000536443 OSCARQ8IYS5 282 aa17.01■□□□□ 0.31
OTUB1-207ENST00000536443 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
OTUB1-207ENST00000536443 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
OTUB1-207ENST00000536443 ABCA5Q8WWZ7 1642 aa16.96■□□□□ 0.31
OTUB1-207ENST00000536443 MAGI1Q96QZ7 1491 aaPredicted RBP16.95■□□□□ 0.3
OTUB1-207ENST00000536443 SNAPC4Q5SXM2 1469 aa16.94■□□□□ 0.3
OTUB1-207ENST00000536443 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
OTUB1-207ENST00000536443 FBLN2P98095 1184 aa16.88■□□□□ 0.29
OTUB1-207ENST00000536443 CHMP7Q8WUX9 453 aaPredicted RBP16.88■□□□□ 0.29
OTUB1-207ENST00000536443 CHD1O14646 1710 aa16.87■□□□□ 0.29
OTUB1-207ENST00000536443 SYNJ2O15056 1496 aa16.87■□□□□ 0.29
OTUB1-207ENST00000536443 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
OTUB1-207ENST00000536443 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
OTUB1-207ENST00000536443 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
OTUB1-207ENST00000536443 ADAMTS12P58397 1594 aa16.79■□□□□ 0.28
OTUB1-207ENST00000536443 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.28
OTUB1-207ENST00000536443 GRIN2AQ12879 1464 aa16.76■□□□□ 0.27
OTUB1-207ENST00000536443 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
OTUB1-207ENST00000536443 IGF1RP08069 1367 aa16.76■□□□□ 0.27
OTUB1-207ENST00000536443 CLASP1Q7Z460 1538 aa16.73■□□□□ 0.27
OTUB1-207ENST00000536443 NUP160Q12769 1436 aa16.7■□□□□ 0.26
OTUB1-207ENST00000536443 ARHGEF11O15085 1522 aa16.69■□□□□ 0.26
OTUB1-207ENST00000536443 RIMBP3CA6NJZ7 1639 aa16.68■□□□□ 0.26
OTUB1-207ENST00000536443 RIMBP3BA6NNM3 1639 aa16.68■□□□□ 0.26
OTUB1-207ENST00000536443 RIMBP3Q9UFD9 1639 aa16.68■□□□□ 0.26
OTUB1-207ENST00000536443 CUL7Q14999 1698 aa16.68■□□□□ 0.26
OTUB1-207ENST00000536443 CARMIL1Q5VZK9 1371 aa16.66■□□□□ 0.26
OTUB1-207ENST00000536443 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
OTUB1-207ENST00000536443 RUSC2Q8N2Y8 1516 aa16.63■□□□□ 0.25
OTUB1-207ENST00000536443 ARAP1Q96P48 1450 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms