RNA–Protein interactions for RNA: ENST00000533787.1

CCDC84-207, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 1,140 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-207ENST00000533787 NISCHQ9Y2I1 1504 aa30.25■■■□□ 2.43
CCDC84-207ENST00000533787 ABCC9O60706 1549 aa27.49■■□□□ 1.99
CCDC84-207ENST00000533787 CCDC180Q9P1Z9 1646 aa27.26■■□□□ 1.95
CCDC84-207ENST00000533787 RB1CC1Q8TDY2 1594 aa26.06■■□□□ 1.76
CCDC84-207ENST00000533787 DNAJC5BQ9UF47 199 aa26.01■■□□□ 1.75
CCDC84-207ENST00000533787 NACADO15069 1562 aa25.82■■□□□ 1.72
CCDC84-207ENST00000533787 DCAF8L2P0C7V8 631 aa25.62■■□□□ 1.69
CCDC84-207ENST00000533787 PABPN1Q86U42 306 aaKnown RBP eCLIP25.55■■□□□ 1.68
CCDC84-207ENST00000533787 UNC13AQ9UPW8 1703 aa25.52■■□□□ 1.68
CCDC84-207ENST00000533787 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
CCDC84-207ENST00000533787 BICRAQ9NZM4 1560 aa25.32■■□□□ 1.64
CCDC84-207ENST00000533787 ZCCHC6Q5VYS8 1495 aaKnown RBP25.02■■□□□ 1.6
CCDC84-207ENST00000533787 DCAF1Q9Y4B6 1507 aa24.96■■□□□ 1.59
CCDC84-207ENST00000533787 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
CCDC84-207ENST00000533787 CC2D2AQ9P2K1 1620 aa24.83■■□□□ 1.57
CCDC84-207ENST00000533787 SCRIBQ14160 1630 aa24.83■■□□□ 1.56
CCDC84-207ENST00000533787 CECR2Q9BXF3 1484 aa24.78■■□□□ 1.56
CCDC84-207ENST00000533787 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
CCDC84-207ENST00000533787 DNAJC5Q9H3Z4 198 aa24.05■■□□□ 1.44
CCDC84-207ENST00000533787 NCAPD3P42695 1498 aa23.83■■□□□ 1.41
CCDC84-207ENST00000533787 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
CCDC84-207ENST00000533787 CUX2O14529 1486 aa23.78■■□□□ 1.4
CCDC84-207ENST00000533787 ERCC6Q03468 1493 aa23.75■■□□□ 1.39
CCDC84-207ENST00000533787 ATAD2BQ9ULI0 1458 aa23.74■■□□□ 1.39
CCDC84-207ENST00000533787 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
CCDC84-207ENST00000533787 SMARCA2P51531 1590 aa23.65■■□□□ 1.38
CCDC84-207ENST00000533787 HMGXB3Q12766 1538 aa23.64■■□□□ 1.38
CCDC84-207ENST00000533787 NESP48681 1621 aa23.55■■□□□ 1.36
CCDC84-207ENST00000533787 BAZ1AQ9NRL2 1556 aaPredicted RBP23.5■■□□□ 1.35
CCDC84-207ENST00000533787 BAZ1BQ9UIG0 1483 aaKnown RBP23.49■■□□□ 1.35
CCDC84-207ENST00000533787 PEG3Q9GZU2 1588 aa23.43■■□□□ 1.34
CCDC84-207ENST00000533787 THOC2Q8NI27 1593 aaKnown RBP23.37■■□□□ 1.33
CCDC84-207ENST00000533787 LAMC3Q9Y6N6 1575 aa23.35■■□□□ 1.33
CCDC84-207ENST00000533787 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
CCDC84-207ENST00000533787 KIF21AQ7Z4S6 1674 aa23.26■■□□□ 1.31
CCDC84-207ENST00000533787 PDS5BQ9NTI5 1447 aa23.2■■□□□ 1.3
CCDC84-207ENST00000533787 CADPSQ9ULU8 1353 aa23.1■■□□□ 1.29
CCDC84-207ENST00000533787 WIZO95785 1651 aa23.03■■□□□ 1.28
CCDC84-207ENST00000533787 MRC2Q9UBG0 1479 aa23.03■■□□□ 1.28
CCDC84-207ENST00000533787 WDR62O43379 1518 aa22.98■■□□□ 1.27
CCDC84-207ENST00000533787 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
CCDC84-207ENST00000533787 CEP164Q9UPV0 1460 aa22.89■■□□□ 1.25
CCDC84-207ENST00000533787 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
CCDC84-207ENST00000533787 CFTRP13569 1480 aa22.79■■□□□ 1.24
CCDC84-207ENST00000533787 RSF1Q96T23 1441 aaPredicted RBP22.74■■□□□ 1.23
CCDC84-207ENST00000533787 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
CCDC84-207ENST00000533787 URB2Q14146 1524 aaKnown RBP22.68■■□□□ 1.22
CCDC84-207ENST00000533787 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
CCDC84-207ENST00000533787 OSCARQ8IYS5 282 aa22.65■■□□□ 1.22
CCDC84-207ENST00000533787 PRDM2Q13029 1718 aa22.58■■□□□ 1.21
CCDC84-207ENST00000533787 CCDC88BA6NC98 1476 aa22.46■■□□□ 1.19
CCDC84-207ENST00000533787 IFT140Q96RY7 1462 aa22.44■■□□□ 1.18
CCDC84-207ENST00000533787 ZNF608Q9ULD9 1512 aaPredicted RBP22.44■■□□□ 1.18
CCDC84-207ENST00000533787 RIMBP3CA6NJZ7 1639 aa22.42■■□□□ 1.18
CCDC84-207ENST00000533787 RIMBP3BA6NNM3 1639 aa22.42■■□□□ 1.18
CCDC84-207ENST00000533787 RIMBP3Q9UFD9 1639 aa22.42■■□□□ 1.18
CCDC84-207ENST00000533787 TOPBP1Q92547 1522 aa22.39■■□□□ 1.17
CCDC84-207ENST00000533787 ABCC8Q09428 1581 aa22.32■■□□□ 1.16
CCDC84-207ENST00000533787 EIF4G3O43432 1585 aaKnown RBP22.31■■□□□ 1.16
CCDC84-207ENST00000533787 ARHGEF11O15085 1522 aa22.31■■□□□ 1.16
CCDC84-207ENST00000533787 DNMBPQ6XZF7 1577 aa22.28■■□□□ 1.16
CCDC84-207ENST00000533787 TARBP1Q13395 1621 aaKnown RBP22.21■■□□□ 1.15
CCDC84-207ENST00000533787 CHD1O14646 1710 aa22.2■■□□□ 1.14
CCDC84-207ENST00000533787 AQRO60306 1485 aaKnown RBP eCLIP22.2■■□□□ 1.14
CCDC84-207ENST00000533787 CYB5RLQ6IPT4 315 aa22.15■■□□□ 1.14
CCDC84-207ENST00000533787 POLA1P09884 1462 aaPredicted RBP22.14■■□□□ 1.13
CCDC84-207ENST00000533787 FBLN2P98095 1184 aa22.09■■□□□ 1.13
CCDC84-207ENST00000533787 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
CCDC84-207ENST00000533787 RAD54L2Q9Y4B4 1467 aa22.07■■□□□ 1.12
CCDC84-207ENST00000533787 SOGA1O94964 1423 aa22.03■■□□□ 1.12
CCDC84-207ENST00000533787 TDRD9Q8NDG6 1382 aaKnown RBP22.02■■□□□ 1.12
CCDC84-207ENST00000533787 TRHP20396 242 aaPredicted RBP21.98■■□□□ 1.11
CCDC84-207ENST00000533787 SNAPC4Q5SXM2 1469 aa21.97■■□□□ 1.11
CCDC84-207ENST00000533787 FGD5Q6ZNL6 1462 aa21.97■■□□□ 1.11
CCDC84-207ENST00000533787 WDR97A6NE52 1622 aa21.96■■□□□ 1.11
CCDC84-207ENST00000533787 CUX1P39880 1505 aa21.92■■□□□ 1.1
CCDC84-207ENST00000533787 CLASP1Q7Z460 1538 aa21.92■■□□□ 1.1
CCDC84-207ENST00000533787 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
CCDC84-207ENST00000533787 CHMP7Q8WUX9 453 aaPredicted RBP21.89■■□□□ 1.09
CCDC84-207ENST00000533787 SYNJ1O43426 1573 aa21.89■■□□□ 1.09
CCDC84-207ENST00000533787 GRIN2BQ13224 1484 aa21.86■■□□□ 1.09
CCDC84-207ENST00000533787 SYNJ2O15056 1496 aa21.83■■□□□ 1.08
CCDC84-207ENST00000533787 PBRM1Q86U86 1689 aa21.79■■□□□ 1.08
CCDC84-207ENST00000533787 GAPVD1Q14C86 1478 aa21.76■■□□□ 1.07
CCDC84-207ENST00000533787 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
CCDC84-207ENST00000533787 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.07
CCDC84-207ENST00000533787 GRIN2AQ12879 1464 aa21.59■■□□□ 1.05
CCDC84-207ENST00000533787 ERCC6L2Q5T890 1561 aa21.57■■□□□ 1.04
CCDC84-207ENST00000533787 WRNQ14191 1432 aaPredicted RBP eCLIP21.56■■□□□ 1.04
CCDC84-207ENST00000533787 ADAMTS12P58397 1594 aa21.56■■□□□ 1.04
CCDC84-207ENST00000533787 SUPT5HO00267 1087 aaKnown RBP21.54■■□□□ 1.04
CCDC84-207ENST00000533787 CEP170Q5SW79 1584 aa21.53■■□□□ 1.04
CCDC84-207ENST00000533787 NUP160Q12769 1436 aa21.53■■□□□ 1.04
CCDC84-207ENST00000533787 BIVM-ERCC5R4GMW8 1640 aa21.51■■□□□ 1.03
CCDC84-207ENST00000533787 TOP2BQ02880 1626 aa21.5■■□□□ 1.03
CCDC84-207ENST00000533787 SHROOM2Q13796 1616 aa21.47■■□□□ 1.03
CCDC84-207ENST00000533787 FHAD1B1AJZ9 1412 aa21.47■■□□□ 1.03
CCDC84-207ENST00000533787 ERICH3Q5RHP9 1530 aa21.43■■□□□ 1.02
CCDC84-207ENST00000533787 KIF13AQ9H1H9 1805 aa21.34■■□□□ 1.01
CCDC84-207ENST00000533787 PRG4Q92954 1404 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms