RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 NISCHQ9Y2I1 1504 aa50.02■■■■■ 5.6
CDCA4-202ENST00000392590 CCDC180Q9P1Z9 1646 aa44.32■■■■■ 4.69
CDCA4-202ENST00000392590 ABCC9O60706 1549 aa43.44■■■■■ 4.55
CDCA4-202ENST00000392590 DCAF8L2P0C7V8 631 aa41.95■■■■■ 4.31
CDCA4-202ENST00000392590 RB1CC1Q8TDY2 1594 aa41.76■■■■■ 4.28
CDCA4-202ENST00000392590 NACADO15069 1562 aa41.74■■■■■ 4.27
CDCA4-202ENST00000392590 ZCCHC6Q5VYS8 1495 aaKnown RBP41.66■■■■■ 4.26
CDCA4-202ENST00000392590 MYO15BQ96JP2 1530 aa41.51■■■■■ 4.24
CDCA4-202ENST00000392590 DCAF1Q9Y4B6 1507 aa41.36■■■■■ 4.21
CDCA4-202ENST00000392590 PABPN1Q86U42 306 aaKnown RBP eCLIP40.7■■■■■ 4.11
CDCA4-202ENST00000392590 UNC13AQ9UPW8 1703 aa40.67■■■■■ 4.1
CDCA4-202ENST00000392590 SCRIBQ14160 1630 aa40.53■■■■■ 4.08
CDCA4-202ENST00000392590 BICRAQ9NZM4 1560 aa40.47■■■■■ 4.07
CDCA4-202ENST00000392590 SHROOM4Q9ULL8 1493 aa40.05■■■■■ 4
CDCA4-202ENST00000392590 DNAJC5BQ9UF47 199 aa39.86■■■■□ 3.97
CDCA4-202ENST00000392590 EIF4G1Q04637 1599 aaKnown RBP39.42■■■■□ 3.9
CDCA4-202ENST00000392590 CC2D2AQ9P2K1 1620 aa39.23■■■■□ 3.87
CDCA4-202ENST00000392590 CECR2Q9BXF3 1484 aa39.03■■■■□ 3.84
CDCA4-202ENST00000392590 BAZ1AQ9NRL2 1556 aaPredicted RBP38.75■■■■□ 3.79
CDCA4-202ENST00000392590 SMARCA4P51532 1647 aa38.74■■■■□ 3.79
CDCA4-202ENST00000392590 ATAD2BQ9ULI0 1458 aa38.59■■■■□ 3.77
CDCA4-202ENST00000392590 NCAPD3P42695 1498 aa38.56■■■■□ 3.76
CDCA4-202ENST00000392590 MROH2BQ7Z745 1585 aa38.56■■■■□ 3.76
CDCA4-202ENST00000392590 SMARCA2P51531 1590 aa38.51■■■■□ 3.76
CDCA4-202ENST00000392590 PEG3Q9GZU2 1588 aa38.36■■■■□ 3.73
CDCA4-202ENST00000392590 HMGXB3Q12766 1538 aa38.31■■■■□ 3.72
CDCA4-202ENST00000392590 BAZ1BQ9UIG0 1483 aaKnown RBP38.27■■■■□ 3.72
CDCA4-202ENST00000392590 RSF1Q96T23 1441 aaPredicted RBP38.19■■■■□ 3.7
CDCA4-202ENST00000392590 WIZO95785 1651 aa38.1■■■■□ 3.69
CDCA4-202ENST00000392590 TOP2AP11388 1531 aaKnown RBP37.72■■■■□ 3.63
CDCA4-202ENST00000392590 NESP48681 1621 aa37.59■■■■□ 3.61
CDCA4-202ENST00000392590 CADPSQ9ULU8 1353 aa37.48■■■■□ 3.59
CDCA4-202ENST00000392590 LAMC3Q9Y6N6 1575 aa37.47■■■■□ 3.59
CDCA4-202ENST00000392590 ERCC6Q03468 1493 aa37.45■■■■□ 3.59
CDCA4-202ENST00000392590 SUPT5HO00267 1087 aaKnown RBP37.4■■■■□ 3.58
CDCA4-202ENST00000392590 CCDC88BA6NC98 1476 aa37.33■■■■□ 3.57
CDCA4-202ENST00000392590 PDS5BQ9NTI5 1447 aa37.31■■■■□ 3.56
CDCA4-202ENST00000392590 CFTRP13569 1480 aa37.23■■■■□ 3.55
CDCA4-202ENST00000392590 KIF21AQ7Z4S6 1674 aa37.04■■■■□ 3.52
CDCA4-202ENST00000392590 FANCD2Q9BXW9 1451 aa37.01■■■■□ 3.52
CDCA4-202ENST00000392590 CUX2O14529 1486 aa36.97■■■■□ 3.51
CDCA4-202ENST00000392590 CEP164Q9UPV0 1460 aa36.94■■■■□ 3.5
CDCA4-202ENST00000392590 THOC2Q8NI27 1593 aaKnown RBP36.91■■■■□ 3.5
CDCA4-202ENST00000392590 MRC2Q9UBG0 1479 aa36.87■■■■□ 3.49
CDCA4-202ENST00000392590 PRDM2Q13029 1718 aa36.75■■■■□ 3.47
CDCA4-202ENST00000392590 WDR62O43379 1518 aa36.7■■■■□ 3.47
CDCA4-202ENST00000392590 URB2Q14146 1524 aaKnown RBP36.61■■■■□ 3.45
CDCA4-202ENST00000392590 ABCC8Q09428 1581 aa36.43■■■■□ 3.42
CDCA4-202ENST00000392590 TOPBP1Q92547 1522 aa36.41■■■■□ 3.42
CDCA4-202ENST00000392590 DNMBPQ6XZF7 1577 aa36.35■■■■□ 3.41
CDCA4-202ENST00000392590 IFT140Q96RY7 1462 aa36.18■■■■□ 3.38
CDCA4-202ENST00000392590 CUX1P39880 1505 aa36.15■■■■□ 3.38
CDCA4-202ENST00000392590 POLA1P09884 1462 aaPredicted RBP36.11■■■■□ 3.37
CDCA4-202ENST00000392590 FGD5Q6ZNL6 1462 aa36.04■■■■□ 3.36
CDCA4-202ENST00000392590 SOGA1O94964 1423 aa36.03■■■■□ 3.36
CDCA4-202ENST00000392590 ZNF608Q9ULD9 1512 aaPredicted RBP36.01■■■■□ 3.36
CDCA4-202ENST00000392590 WRNQ14191 1432 aaPredicted RBP eCLIP36■■■■□ 3.35
CDCA4-202ENST00000392590 RAD54L2Q9Y4B4 1467 aa35.98■■■■□ 3.35
CDCA4-202ENST00000392590 TARBP1Q13395 1621 aaKnown RBP35.95■■■■□ 3.35
CDCA4-202ENST00000392590 AQRO60306 1485 aaKnown RBP eCLIP35.85■■■■□ 3.335e-6■■□□□ 14.3
CDCA4-202ENST00000392590 DNAJC5Q9H3Z4 198 aa35.85■■■■□ 3.33
CDCA4-202ENST00000392590 SYNJ1O43426 1573 aa35.84■■■■□ 3.33
CDCA4-202ENST00000392590 TOP2BQ02880 1626 aa35.84■■■■□ 3.33
CDCA4-202ENST00000392590 TDRD9Q8NDG6 1382 aaKnown RBP35.83■■■■□ 3.33
CDCA4-202ENST00000392590 BIVM-ERCC5R4GMW8 1640 aa35.79■■■■□ 3.32
CDCA4-202ENST00000392590 EIF4G3O43432 1585 aaKnown RBP35.79■■■■□ 3.32
CDCA4-202ENST00000392590 ABCA10Q8WWZ4 1543 aa35.69■■■■□ 3.3
CDCA4-202ENST00000392590 WDR97A6NE52 1622 aa35.65■■■■□ 3.3
CDCA4-202ENST00000392590 OSCARQ8IYS5 282 aa35.59■■■■□ 3.29
CDCA4-202ENST00000392590 GAPVD1Q14C86 1478 aa35.58■■■■□ 3.29
CDCA4-202ENST00000392590 GRIN2BQ13224 1484 aa35.56■■■■□ 3.28
CDCA4-202ENST00000392590 FBLN2P98095 1184 aa35.49■■■■□ 3.27
CDCA4-202ENST00000392590 SNAPC4Q5SXM2 1469 aa35.48■■■■□ 3.27
CDCA4-202ENST00000392590 ABCA5Q8WWZ7 1642 aa35.47■■■■□ 3.27
CDCA4-202ENST00000392590 MAGI1Q96QZ7 1491 aaPredicted RBP35.43■■■■□ 3.26
CDCA4-202ENST00000392590 CHMP7Q8WUX9 453 aaPredicted RBP35.4■■■■□ 3.26
CDCA4-202ENST00000392590 PBRM1Q86U86 1689 aa35.35■■■■□ 3.25
CDCA4-202ENST00000392590 TRIM41Q8WV44 630 aa35.32■■■■□ 3.24
CDCA4-202ENST00000392590 SYNJ2O15056 1496 aa35.3■■■■□ 3.24
CDCA4-202ENST00000392590 CHD1O14646 1710 aa35.28■■■■□ 3.24
CDCA4-202ENST00000392590 KIF27Q86VH2 1401 aa35.26■■■■□ 3.24
CDCA4-202ENST00000392590 ERICH3Q5RHP9 1530 aa35.25■■■■□ 3.23
CDCA4-202ENST00000392590 FHAD1B1AJZ9 1412 aa35.18■■■■□ 3.22
CDCA4-202ENST00000392590 IGF1RP08069 1367 aa35.13■■■■□ 3.22
CDCA4-202ENST00000392590 ADAMTS12P58397 1594 aa35.13■■■■□ 3.21
CDCA4-202ENST00000392590 GRIN2AQ12879 1464 aa35.08■■■■□ 3.21
CDCA4-202ENST00000392590 CLASP1Q7Z460 1538 aa34.96■■■■□ 3.19
CDCA4-202ENST00000392590 RUSC2Q8N2Y8 1516 aa34.95■■■■□ 3.19
CDCA4-202ENST00000392590 NUP160Q12769 1436 aa34.93■■■■□ 3.18
CDCA4-202ENST00000392590 CARMIL1Q5VZK9 1371 aa34.93■■■■□ 3.18
CDCA4-202ENST00000392590 CHIC1Q5VXU3 224 aa34.91■■■■□ 3.18
CDCA4-202ENST00000392590 CUL7Q14999 1698 aa34.89■■■■□ 3.18
CDCA4-202ENST00000392590 ARHGEF11O15085 1522 aa34.89■■■■□ 3.18
CDCA4-202ENST00000392590 CEP170Q5SW79 1584 aa34.86■■■■□ 3.17
CDCA4-202ENST00000392590 RIMBP3CA6NJZ7 1639 aa34.84■■■■□ 3.17
CDCA4-202ENST00000392590 RIMBP3BA6NNM3 1639 aa34.84■■■■□ 3.17
CDCA4-202ENST00000392590 RIMBP3Q9UFD9 1639 aa34.84■■■■□ 3.17
CDCA4-202ENST00000392590 RAPGEF2Q9Y4G8 1499 aa34.69■■■■□ 3.14
CDCA4-202ENST00000392590 CYB5RLQ6IPT4 315 aa34.69■■■■□ 3.14
CDCA4-202ENST00000392590 JPH4Q96JJ6 628 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms