RNA–Protein interactions for RNA: ENST00000412653.5

FAM3C-202, Transcript of family with sequence similarity 3 member C, humanhuman

TSL 4

Gene FAM3C, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-202ENST00000412653 NISCHQ9Y2I1 1504 aa42.79■■■■■ 4.44
FAM3C-202ENST00000412653 ABCC9O60706 1549 aa38.89■■■■□ 3.82
FAM3C-202ENST00000412653 CCDC180Q9P1Z9 1646 aa38.63■■■■□ 3.77
FAM3C-202ENST00000412653 DNAJC5BQ9UF47 199 aa36.87■■■■□ 3.49
FAM3C-202ENST00000412653 RB1CC1Q8TDY2 1594 aa36.87■■■■□ 3.49
FAM3C-202ENST00000412653 NACADO15069 1562 aa36.53■■■■□ 3.44
FAM3C-202ENST00000412653 UNC13AQ9UPW8 1703 aa36.21■■■■□ 3.39
FAM3C-202ENST00000412653 PABPN1Q86U42 306 aaKnown RBP eCLIP36.08■■■■□ 3.37
FAM3C-202ENST00000412653 DCAF8L2P0C7V8 631 aa35.99■■■■□ 3.35
FAM3C-202ENST00000412653 BICRAQ9NZM4 1560 aa35.94■■■■□ 3.34
FAM3C-202ENST00000412653 MYO15BQ96JP2 1530 aa35.94■■■■□ 3.34
FAM3C-202ENST00000412653 ZCCHC6Q5VYS8 1495 aaKnown RBP35.41■■■■□ 3.26
FAM3C-202ENST00000412653 DCAF1Q9Y4B6 1507 aa35.35■■■■□ 3.25
FAM3C-202ENST00000412653 SHROOM4Q9ULL8 1493 aa35.32■■■■□ 3.24
FAM3C-202ENST00000412653 CC2D2AQ9P2K1 1620 aa35.18■■■■□ 3.22
FAM3C-202ENST00000412653 SCRIBQ14160 1630 aa35.12■■■■□ 3.21
FAM3C-202ENST00000412653 CECR2Q9BXF3 1484 aa35.08■■■■□ 3.21
FAM3C-202ENST00000412653 EIF4G1Q04637 1599 aaKnown RBP35.02■■■■□ 3.2
FAM3C-202ENST00000412653 DNAJC5Q9H3Z4 198 aa34.05■■■■□ 3.04
FAM3C-202ENST00000412653 NCAPD3P42695 1498 aa33.73■■■□□ 2.99
FAM3C-202ENST00000412653 CUX2O14529 1486 aa33.69■■■□□ 2.98
FAM3C-202ENST00000412653 ATAD2BQ9ULI0 1458 aa33.58■■■□□ 2.97
FAM3C-202ENST00000412653 ERCC6Q03468 1493 aa33.53■■■□□ 2.96
FAM3C-202ENST00000412653 SMARCA4P51532 1647 aa33.5■■■□□ 2.95
FAM3C-202ENST00000412653 HMGXB3Q12766 1538 aa33.48■■■□□ 2.95
FAM3C-202ENST00000412653 SMARCA2P51531 1590 aa33.44■■■□□ 2.94
FAM3C-202ENST00000412653 NESP48681 1621 aa33.35■■■□□ 2.93
FAM3C-202ENST00000412653 PEG3Q9GZU2 1588 aa33.21■■■□□ 2.91
FAM3C-202ENST00000412653 BAZ1AQ9NRL2 1556 aaPredicted RBP33.21■■■□□ 2.91
FAM3C-202ENST00000412653 BAZ1BQ9UIG0 1483 aaKnown RBP33.18■■■□□ 2.9
FAM3C-202ENST00000412653 THOC2Q8NI27 1593 aaKnown RBP33.18■■■□□ 2.9
FAM3C-202ENST00000412653 LAMC3Q9Y6N6 1575 aa33.04■■■□□ 2.88
FAM3C-202ENST00000412653 MROH2BQ7Z745 1585 aa32.99■■■□□ 2.87
FAM3C-202ENST00000412653 KIF21AQ7Z4S6 1674 aa32.97■■■□□ 2.87
FAM3C-202ENST00000412653 PDS5BQ9NTI5 1447 aa32.76■■■□□ 2.83
FAM3C-202ENST00000412653 CADPSQ9ULU8 1353 aa32.63■■■□□ 2.81
FAM3C-202ENST00000412653 WIZO95785 1651 aa32.59■■■□□ 2.81
FAM3C-202ENST00000412653 WDR62O43379 1518 aa32.58■■■□□ 2.81
FAM3C-202ENST00000412653 MRC2Q9UBG0 1479 aa32.58■■■□□ 2.81
FAM3C-202ENST00000412653 CEP164Q9UPV0 1460 aa32.35■■■□□ 2.77
FAM3C-202ENST00000412653 TRIM41Q8WV44 630 aa32.31■■■□□ 2.76
FAM3C-202ENST00000412653 FANCD2Q9BXW9 1451 aa32.29■■■□□ 2.76
FAM3C-202ENST00000412653 CFTRP13569 1480 aa32.24■■■□□ 2.75
FAM3C-202ENST00000412653 TOP2AP11388 1531 aaKnown RBP32.12■■■□□ 2.73
FAM3C-202ENST00000412653 URB2Q14146 1524 aaKnown RBP32.12■■■□□ 2.73
FAM3C-202ENST00000412653 RSF1Q96T23 1441 aaPredicted RBP32.12■■■□□ 2.73
FAM3C-202ENST00000412653 PRDM2Q13029 1718 aa31.99■■■□□ 2.71
FAM3C-202ENST00000412653 OSCARQ8IYS5 282 aa31.94■■■□□ 2.7
FAM3C-202ENST00000412653 ZNF608Q9ULD9 1512 aaPredicted RBP31.78■■■□□ 2.68
FAM3C-202ENST00000412653 RIMBP3CA6NJZ7 1639 aa31.78■■■□□ 2.68
FAM3C-202ENST00000412653 RIMBP3BA6NNM3 1639 aa31.78■■■□□ 2.68
FAM3C-202ENST00000412653 RIMBP3Q9UFD9 1639 aa31.78■■■□□ 2.68
FAM3C-202ENST00000412653 CCDC88BA6NC98 1476 aa31.73■■■□□ 2.67
FAM3C-202ENST00000412653 IFT140Q96RY7 1462 aa31.72■■■□□ 2.67
FAM3C-202ENST00000412653 TOPBP1Q92547 1522 aa31.67■■■□□ 2.66
FAM3C-202ENST00000412653 EIF4G3O43432 1585 aaKnown RBP31.61■■■□□ 2.65
FAM3C-202ENST00000412653 ARHGEF11O15085 1522 aa31.6■■■□□ 2.65
FAM3C-202ENST00000412653 DNMBPQ6XZF7 1577 aa31.53■■■□□ 2.64
FAM3C-202ENST00000412653 TARBP1Q13395 1621 aaKnown RBP31.49■■■□□ 2.63
FAM3C-202ENST00000412653 ABCC8Q09428 1581 aa31.48■■■□□ 2.63
FAM3C-202ENST00000412653 CHD1O14646 1710 aa31.46■■■□□ 2.63
FAM3C-202ENST00000412653 AQRO60306 1485 aaKnown RBP eCLIP31.38■■■□□ 2.615e-7■■■■□ 19.7
FAM3C-202ENST00000412653 POLA1P09884 1462 aaPredicted RBP31.33■■■□□ 2.61
FAM3C-202ENST00000412653 ARAP1Q96P48 1450 aa31.29■■■□□ 2.6
FAM3C-202ENST00000412653 CYB5RLQ6IPT4 315 aa31.23■■■□□ 2.59
FAM3C-202ENST00000412653 RAD54L2Q9Y4B4 1467 aa31.2■■■□□ 2.58
FAM3C-202ENST00000412653 CLASP1Q7Z460 1538 aa31.1■■■□□ 2.57
FAM3C-202ENST00000412653 WDR97A6NE52 1622 aa31.09■■■□□ 2.57
FAM3C-202ENST00000412653 SOGA1O94964 1423 aa31.08■■■□□ 2.57
FAM3C-202ENST00000412653 TDRD9Q8NDG6 1382 aaKnown RBP31.08■■■□□ 2.57
FAM3C-202ENST00000412653 FBLN2P98095 1184 aa31.08■■■□□ 2.57
FAM3C-202ENST00000412653 SNAPC4Q5SXM2 1469 aa31.08■■■□□ 2.57
FAM3C-202ENST00000412653 FGD5Q6ZNL6 1462 aa31.06■■■□□ 2.56
FAM3C-202ENST00000412653 CUX1P39880 1505 aa31.02■■■□□ 2.56
FAM3C-202ENST00000412653 MAGI1Q96QZ7 1491 aaPredicted RBP30.95■■■□□ 2.55
FAM3C-202ENST00000412653 SYNJ1O43426 1573 aa30.94■■■□□ 2.54
FAM3C-202ENST00000412653 TRHP20396 242 aaPredicted RBP30.94■■■□□ 2.54
FAM3C-202ENST00000412653 GRIN2BQ13224 1484 aa30.89■■■□□ 2.54
FAM3C-202ENST00000412653 PBRM1Q86U86 1689 aa30.87■■■□□ 2.53
FAM3C-202ENST00000412653 SYNJ2O15056 1496 aa30.86■■■□□ 2.53
FAM3C-202ENST00000412653 CHMP7Q8WUX9 453 aaPredicted RBP30.81■■■□□ 2.52
FAM3C-202ENST00000412653 ABCA5Q8WWZ7 1642 aa30.76■■■□□ 2.52
FAM3C-202ENST00000412653 GAPVD1Q14C86 1478 aa30.73■■■□□ 2.51
FAM3C-202ENST00000412653 ABCA10Q8WWZ4 1543 aa30.7■■■□□ 2.51
FAM3C-202ENST00000412653 ERCC6L2Q5T890 1561 aa30.6■■■□□ 2.49
FAM3C-202ENST00000412653 ADAMTS12P58397 1594 aa30.54■■■□□ 2.48
FAM3C-202ENST00000412653 GRIN2AQ12879 1464 aa30.53■■■□□ 2.48
FAM3C-202ENST00000412653 CEP170Q5SW79 1584 aa30.51■■■□□ 2.47
FAM3C-202ENST00000412653 NUP160Q12769 1436 aa30.47■■■□□ 2.47
FAM3C-202ENST00000412653 SHROOM2Q13796 1616 aa30.46■■■□□ 2.47
FAM3C-202ENST00000412653 BIVM-ERCC5R4GMW8 1640 aa30.45■■■□□ 2.47
FAM3C-202ENST00000412653 TOP2BQ02880 1626 aa30.41■■■□□ 2.46
FAM3C-202ENST00000412653 WRNQ14191 1432 aaPredicted RBP eCLIP30.4■■■□□ 2.46
FAM3C-202ENST00000412653 FHAD1B1AJZ9 1412 aa30.32■■■□□ 2.44
FAM3C-202ENST00000412653 ERICH3Q5RHP9 1530 aa30.29■■■□□ 2.44
FAM3C-202ENST00000412653 KIF13AQ9H1H9 1805 aa30.27■■■□□ 2.44
FAM3C-202ENST00000412653 AEBP2Q6ZN18 517 aaPredicted RBP30.27■■■□□ 2.44
FAM3C-202ENST00000412653 SUPT5HO00267 1087 aaKnown RBP30.21■■■□□ 2.43
FAM3C-202ENST00000412653 RUSC2Q8N2Y8 1516 aa30.14■■■□□ 2.42
FAM3C-202ENST00000412653 PRG4Q92954 1404 aaPredicted RBP30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 1614.5 ms