RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.27
CLN8-207ENST00000524258 CCDC180Q9P1Z9 1646 aa25.85■■□□□ 1.73
CLN8-207ENST00000524258 ABCC9O60706 1549 aa25.31■■□□□ 1.64
CLN8-207ENST00000524258 NACADO15069 1562 aa24.33■■□□□ 1.49
CLN8-207ENST00000524258 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.49
CLN8-207ENST00000524258 RB1CC1Q8TDY2 1594 aa24.31■■□□□ 1.48
CLN8-207ENST00000524258 MYO15BQ96JP2 1530 aa24.27■■□□□ 1.48
CLN8-207ENST00000524258 DCAF8L2P0C7V8 631 aa24.27■■□□□ 1.48
CLN8-207ENST00000524258 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
CLN8-207ENST00000524258 UNC13AQ9UPW8 1703 aa23.76■■□□□ 1.39
CLN8-207ENST00000524258 BICRAQ9NZM4 1560 aa23.7■■□□□ 1.38
CLN8-207ENST00000524258 PABPN1Q86U42 306 aaKnown RBP eCLIP23.7■■□□□ 1.38
CLN8-207ENST00000524258 SCRIBQ14160 1630 aa23.59■■□□□ 1.37
CLN8-207ENST00000524258 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
CLN8-207ENST00000524258 DNAJC5BQ9UF47 199 aa23.36■■□□□ 1.33
CLN8-207ENST00000524258 EIF4G1Q04637 1599 aaKnown RBP23■■□□□ 1.27
CLN8-207ENST00000524258 CC2D2AQ9P2K1 1620 aa22.88■■□□□ 1.25
CLN8-207ENST00000524258 CECR2Q9BXF3 1484 aa22.79■■□□□ 1.24
CLN8-207ENST00000524258 SMARCA4P51532 1647 aa22.6■■□□□ 1.21
CLN8-207ENST00000524258 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
CLN8-207ENST00000524258 NCAPD3P42695 1498 aa22.54■■□□□ 1.2
CLN8-207ENST00000524258 ATAD2BQ9ULI0 1458 aa22.54■■□□□ 1.2
CLN8-207ENST00000524258 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
CLN8-207ENST00000524258 PEG3Q9GZU2 1588 aa22.44■■□□□ 1.18
CLN8-207ENST00000524258 SMARCA2P51531 1590 aa22.42■■□□□ 1.18
CLN8-207ENST00000524258 HMGXB3Q12766 1538 aa22.36■■□□□ 1.17
CLN8-207ENST00000524258 RSF1Q96T23 1441 aaPredicted RBP22.3■■□□□ 1.16
CLN8-207ENST00000524258 BAZ1BQ9UIG0 1483 aaKnown RBP22.27■■□□□ 1.16
CLN8-207ENST00000524258 WIZO95785 1651 aa22.22■■□□□ 1.15
CLN8-207ENST00000524258 TOP2AP11388 1531 aaKnown RBP21.99■■□□□ 1.11
CLN8-207ENST00000524258 NESP48681 1621 aa21.95■■□□□ 1.1
CLN8-207ENST00000524258 CADPSQ9ULU8 1353 aa21.86■■□□□ 1.09
CLN8-207ENST00000524258 LAMC3Q9Y6N6 1575 aa21.83■■□□□ 1.09
CLN8-207ENST00000524258 CCDC88BA6NC98 1476 aa21.78■■□□□ 1.08
CLN8-207ENST00000524258 CFTRP13569 1480 aa21.75■■□□□ 1.07
CLN8-207ENST00000524258 ERCC6Q03468 1493 aa21.73■■□□□ 1.07
CLN8-207ENST00000524258 PDS5BQ9NTI5 1447 aa21.7■■□□□ 1.06
CLN8-207ENST00000524258 SUPT5HO00267 1087 aaKnown RBP21.66■■□□□ 1.06
CLN8-207ENST00000524258 KIF21AQ7Z4S6 1674 aa21.6■■□□□ 1.05
CLN8-207ENST00000524258 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
CLN8-207ENST00000524258 FANCD2Q9BXW9 1451 aa21.57■■□□□ 1.04
CLN8-207ENST00000524258 CUX2O14529 1486 aa21.56■■□□□ 1.04
CLN8-207ENST00000524258 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
CLN8-207ENST00000524258 MRC2Q9UBG0 1479 aa21.48■■□□□ 1.03
CLN8-207ENST00000524258 WDR62O43379 1518 aa21.43■■□□□ 1.02
CLN8-207ENST00000524258 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
CLN8-207ENST00000524258 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.01
CLN8-207ENST00000524258 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
CLN8-207ENST00000524258 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
CLN8-207ENST00000524258 DNMBPQ6XZF7 1577 aa21.18■□□□□ 0.98
CLN8-207ENST00000524258 CUX1P39880 1505 aa21.11■□□□□ 0.97
CLN8-207ENST00000524258 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
CLN8-207ENST00000524258 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
CLN8-207ENST00000524258 ZNF608Q9ULD9 1512 aaPredicted RBP21.03■□□□□ 0.96
CLN8-207ENST00000524258 TARBP1Q13395 1621 aaKnown RBP21.01■□□□□ 0.95
CLN8-207ENST00000524258 FGD5Q6ZNL6 1462 aa21■□□□□ 0.95
CLN8-207ENST00000524258 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
CLN8-207ENST00000524258 SOGA1O94964 1423 aa20.97■□□□□ 0.95
CLN8-207ENST00000524258 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.95
CLN8-207ENST00000524258 DNAJC5Q9H3Z4 198 aa20.93■□□□□ 0.94
CLN8-207ENST00000524258 SYNJ1O43426 1573 aa20.91■□□□□ 0.94
CLN8-207ENST00000524258 AQRO60306 1485 aaKnown RBP eCLIP20.9■□□□□ 0.94
CLN8-207ENST00000524258 TOP2BQ02880 1626 aa20.89■□□□□ 0.94
CLN8-207ENST00000524258 BIVM-ERCC5R4GMW8 1640 aa20.88■□□□□ 0.93
CLN8-207ENST00000524258 TDRD9Q8NDG6 1382 aaKnown RBP20.86■□□□□ 0.93
CLN8-207ENST00000524258 EIF4G3O43432 1585 aaKnown RBP20.85■□□□□ 0.93
CLN8-207ENST00000524258 ABCA10Q8WWZ4 1543 aa20.83■□□□□ 0.92
CLN8-207ENST00000524258 WDR97A6NE52 1622 aa20.8■□□□□ 0.92
CLN8-207ENST00000524258 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
CLN8-207ENST00000524258 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
CLN8-207ENST00000524258 GRIN2BQ13224 1484 aa20.7■□□□□ 0.9
CLN8-207ENST00000524258 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
CLN8-207ENST00000524258 SNAPC4Q5SXM2 1469 aa20.67■□□□□ 0.9
CLN8-207ENST00000524258 MAGI1Q96QZ7 1491 aaPredicted RBP20.63■□□□□ 0.89
CLN8-207ENST00000524258 PBRM1Q86U86 1689 aa20.58■□□□□ 0.89
CLN8-207ENST00000524258 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
CLN8-207ENST00000524258 CHD1O14646 1710 aa20.55■□□□□ 0.88
CLN8-207ENST00000524258 ERICH3Q5RHP9 1530 aa20.54■□□□□ 0.88
CLN8-207ENST00000524258 FBLN2P98095 1184 aa20.54■□□□□ 0.88
CLN8-207ENST00000524258 CHMP7Q8WUX9 453 aaPredicted RBP20.52■□□□□ 0.88
CLN8-207ENST00000524258 IGF1RP08069 1367 aa20.51■□□□□ 0.87
CLN8-207ENST00000524258 FHAD1B1AJZ9 1412 aa20.49■□□□□ 0.87
CLN8-207ENST00000524258 KIF27Q86VH2 1401 aa20.49■□□□□ 0.87
CLN8-207ENST00000524258 ADAMTS12P58397 1594 aa20.49■□□□□ 0.87
CLN8-207ENST00000524258 GRIN2AQ12879 1464 aa20.44■□□□□ 0.86
CLN8-207ENST00000524258 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
CLN8-207ENST00000524258 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
CLN8-207ENST00000524258 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
CLN8-207ENST00000524258 NUP160Q12769 1436 aa20.4■□□□□ 0.86
CLN8-207ENST00000524258 ARHGEF11O15085 1522 aa20.35■□□□□ 0.85
CLN8-207ENST00000524258 CEP170Q5SW79 1584 aa20.34■□□□□ 0.85
CLN8-207ENST00000524258 CHIC1Q5VXU3 224 aa20.34■□□□□ 0.85
CLN8-207ENST00000524258 CARMIL1Q5VZK9 1371 aa20.33■□□□□ 0.84
CLN8-207ENST00000524258 RIMBP3CA6NJZ7 1639 aa20.32■□□□□ 0.84
CLN8-207ENST00000524258 RIMBP3BA6NNM3 1639 aa20.32■□□□□ 0.84
CLN8-207ENST00000524258 RIMBP3Q9UFD9 1639 aa20.32■□□□□ 0.84
CLN8-207ENST00000524258 CUL7Q14999 1698 aa20.29■□□□□ 0.84
CLN8-207ENST00000524258 ARAP1Q96P48 1450 aa20.23■□□□□ 0.83
CLN8-207ENST00000524258 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
CLN8-207ENST00000524258 PRXQ9BXM0 1461 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 213.2 ms