RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 NISCHQ9Y2I1 1504 aa17.69■□□□□ 0.42
PKNOX1-203ENST00000432907 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.32
PKNOX1-203ENST00000432907 MYT1Q01538 1121 aa16.84■□□□□ 0.29
PKNOX1-203ENST00000432907 SUPT5HO00267 1087 aaKnown RBP16.73■□□□□ 0.27
PKNOX1-203ENST00000432907 DCAF8L2P0C7V8 631 aa16.67■□□□□ 0.26
PKNOX1-203ENST00000432907 PCGF6Q9BYE7 350 aa16.51■□□□□ 0.23
PKNOX1-203ENST00000432907 CENPBP07199 599 aaPredicted RBP16.41■□□□□ 0.22
PKNOX1-203ENST00000432907 ZEB1P37275 1124 aaPredicted RBP16.21■□□□□ 0.18
PKNOX1-203ENST00000432907 ERICH6Q7L0X2 663 aa16.19■□□□□ 0.18
PKNOX1-203ENST00000432907 SHROOM4Q9ULL8 1493 aa16.17■□□□□ 0.18
PKNOX1-203ENST00000432907 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
PKNOX1-203ENST00000432907 HRCP23327 699 aa16.09■□□□□ 0.17
PKNOX1-203ENST00000432907 CCER1Q8TC90 406 aaPredicted RBP16.01■□□□□ 0.15
PKNOX1-203ENST00000432907 YTHDC1Q96MU7 727 aaKnown RBP15.91■□□□□ 0.14
PKNOX1-203ENST00000432907 TTBK1Q5TCY1 1321 aaPredicted RBP15.77■□□□□ 0.11
PKNOX1-203ENST00000432907 FAM9AQ8IZU1 332 aaPredicted RBP15.76■□□□□ 0.11
PKNOX1-203ENST00000432907 PPARGC1BQ86YN6 1023 aaKnown RBP15.75■□□□□ 0.11
PKNOX1-203ENST00000432907 NEFLP07196 543 aa15.73■□□□□ 0.11
PKNOX1-203ENST00000432907 APLP2Q06481 763 aa15.73■□□□□ 0.11
PKNOX1-203ENST00000432907 TRIM26Q12899 539 aaPredicted RBP15.64■□□□□ 0.1
PKNOX1-203ENST00000432907 GTF3C3Q9Y5Q9 886 aa15.45■□□□□ 0.06
PKNOX1-203ENST00000432907 TRIM41Q8WV44 630 aa15.39■□□□□ 0.05
PKNOX1-203ENST00000432907 DIEXFQ68CQ4 756 aaKnown RBP15.34■□□□□ 0.05
PKNOX1-203ENST00000432907 RTL5Q5HYW3 569 aaPredicted RBP15.25■□□□□ 0.03
PKNOX1-203ENST00000432907 ACIN1Q9UKV3 1341 aaKnown RBP15.24■□□□□ 0.03
PKNOX1-203ENST00000432907 LOC105371045A0A1W2PR82 267 aa15.21■□□□□ 0.02
PKNOX1-203ENST00000432907 DAXXQ9UER7 740 aaPredicted RBP15.19■□□□□ 0.02
PKNOX1-203ENST00000432907 RANGAP1P46060 587 aaPredicted RBP15.16■□□□□ 0.02
PKNOX1-203ENST00000432907 CHIC1Q5VXU3 224 aa15.15■□□□□ 0.02
PKNOX1-203ENST00000432907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.12■□□□□ 0.01
PKNOX1-203ENST00000432907 UBTFP17480 764 aaKnown RBP15.11■□□□□ 0.01
PKNOX1-203ENST00000432907 BCANQ96GW7 911 aa15.06■□□□□ 0
PKNOX1-203ENST00000432907 CCDC180Q9P1Z9 1646 aa15.04■□□□□ -0
PKNOX1-203ENST00000432907 SCAF1Q9H7N4 1312 aaKnown RBP15.03■□□□□ -0
PKNOX1-203ENST00000432907 ABCC9O60706 1549 aa15□□□□□ -0.01
PKNOX1-203ENST00000432907 HNRNPUL2Q1KMD3 747 aaKnown RBP14.93□□□□□ -0.02
PKNOX1-203ENST00000432907 CDK11AQ9UQ88 783 aaPredicted RBP14.9□□□□□ -0.02
PKNOX1-203ENST00000432907 ZNF316A6NFI3 1004 aaPredicted RBP14.89□□□□□ -0.03
PKNOX1-203ENST00000432907 NEUROD1Q13562 356 aa14.89□□□□□ -0.03
PKNOX1-203ENST00000432907 ATP1B4Q9UN42 357 aaPredicted RBP14.87□□□□□ -0.03
PKNOX1-203ENST00000432907 EIF5BO60841 1220 aaKnown RBP14.86□□□□□ -0.03
PKNOX1-203ENST00000432907 ITGAEP38570 1179 aa14.78□□□□□ -0.04
PKNOX1-203ENST00000432907 CLSPNQ9HAW4 1339 aa14.75□□□□□ -0.05
PKNOX1-203ENST00000432907 MYT1LQ9UL68 1186 aa14.74□□□□□ -0.05
PKNOX1-203ENST00000432907 ZCCHC6Q5VYS8 1495 aaKnown RBP14.72□□□□□ -0.05
PKNOX1-203ENST00000432907 POLR3GLQ9BT43 218 aa14.71□□□□□ -0.05
PKNOX1-203ENST00000432907 CNGB1Q14028 1251 aaPredicted RBP14.7□□□□□ -0.06
PKNOX1-203ENST00000432907 GLIPR1L2Q4G1C9 344 aa14.68□□□□□ -0.06
PKNOX1-203ENST00000432907 ANP32EQ9BTT0 268 aa14.66□□□□□ -0.06
PKNOX1-203ENST00000432907 ANP32AP39687 249 aaKnown RBP14.66□□□□□ -0.06
PKNOX1-203ENST00000432907 FKBP8Q14318 412 aa14.63□□□□□ -0.07
PKNOX1-203ENST00000432907 BCL11AQ9H165 835 aa14.63□□□□□ -0.07
PKNOX1-203ENST00000432907 ANP32CO43423 234 aa14.61□□□□□ -0.07
PKNOX1-203ENST00000432907 NBR1Q14596 966 aa14.54□□□□□ -0.08
PKNOX1-203ENST00000432907 PABPN1Q86U42 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
PKNOX1-203ENST00000432907 NPM2Q86SE8 214 aaKnown RBP14.5□□□□□ -0.09
PKNOX1-203ENST00000432907 DCAF1Q9Y4B6 1507 aa14.45□□□□□ -0.1
PKNOX1-203ENST00000432907 RB1CC1Q8TDY2 1594 aa14.42□□□□□ -0.1
PKNOX1-203ENST00000432907 ZBTB47Q9UFB7 747 aaPredicted RBP14.4□□□□□ -0.1
PKNOX1-203ENST00000432907 MIER1Q8N108 512 aa14.4□□□□□ -0.1
PKNOX1-203ENST00000432907 NACADO15069 1562 aa14.39□□□□□ -0.11
PKNOX1-203ENST00000432907 SCRIBQ14160 1630 aa14.39□□□□□ -0.11
PKNOX1-203ENST00000432907 HNRNPUQ00839 825 aaKnown RBP eCLIP14.28□□□□□ -0.12
PKNOX1-203ENST00000432907 FAM50AQ14320 339 aaKnown RBP14.28□□□□□ -0.12
PKNOX1-203ENST00000432907 TRIM52Q96A61 297 aa14.27□□□□□ -0.13
PKNOX1-203ENST00000432907 ANP32BQ92688 251 aaKnown RBP14.26□□□□□ -0.13
PKNOX1-203ENST00000432907 RTN4Q9NQC3 1192 aaKnown RBP14.26□□□□□ -0.13
PKNOX1-203ENST00000432907 DDX10Q13206 875 aaKnown RBP14.22□□□□□ -0.13
PKNOX1-203ENST00000432907 CCDC136Q96JN2 1154 aa14.21□□□□□ -0.13
PKNOX1-203ENST00000432907 IRX6P78412 446 aaPredicted RBP14.19□□□□□ -0.14
PKNOX1-203ENST00000432907 CSRNP3Q8WYN3 585 aa14.19□□□□□ -0.14
PKNOX1-203ENST00000432907 SUPT16HQ9Y5B9 1047 aaKnown RBP14.19□□□□□ -0.14
PKNOX1-203ENST00000432907 ARXQ96QS3 562 aa14.19□□□□□ -0.14
PKNOX1-203ENST00000432907 DEKP35659 375 aaKnown RBP14.14□□□□□ -0.15
PKNOX1-203ENST00000432907 NEFMP07197 916 aa14.14□□□□□ -0.15
PKNOX1-203ENST00000432907 CANXP27824 592 aaKnown RBP14.13□□□□□ -0.15
PKNOX1-203ENST00000432907 FAM9BQ8IZU0 186 aa14.11□□□□□ -0.15
PKNOX1-203ENST00000432907 SLC4A1APQ9BWU0 796 aaKnown RBP14.11□□□□□ -0.15
PKNOX1-203ENST00000432907 ERICH6BQ5W0A0 696 aa14.11□□□□□ -0.15
PKNOX1-203ENST00000432907 MYO15BQ96JP2 1530 aa14.09□□□□□ -0.15
PKNOX1-203ENST00000432907 ZNF326Q5BKZ1 582 aaKnown RBP14.09□□□□□ -0.15
PKNOX1-203ENST00000432907 UPF2Q9HAU5 1272 aaKnown RBP14.07□□□□□ -0.16
PKNOX1-203ENST00000432907 NOP58Q9Y2X3 529 aaKnown RBP14.06□□□□□ -0.16
PKNOX1-203ENST00000432907 HSP90AA1P07900 732 aaKnown RBP14.06□□□□□ -0.16
PKNOX1-203ENST00000432907 RBM19Q9Y4C8 960 aaKnown RBP14.05□□□□□ -0.16
PKNOX1-203ENST00000432907 PPM1GO15355 546 aaPredicted RBP14.02□□□□□ -0.16
PKNOX1-203ENST00000432907 NAP1L5Q96NT1 182 aaPredicted RBP14.02□□□□□ -0.17
PKNOX1-203ENST00000432907 DDRGK1Q96HY6 314 aa14.01□□□□□ -0.17
PKNOX1-203ENST00000432907 TNNT2P45379 298 aaPredicted RBP14□□□□□ -0.17
PKNOX1-203ENST00000432907 TRIM44Q96DX7 344 aaPredicted RBP14□□□□□ -0.17
PKNOX1-203ENST00000432907 TSHZ2Q9NRE2 1034 aa13.99□□□□□ -0.17
PKNOX1-203ENST00000432907 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.98□□□□□ -0.17
PKNOX1-203ENST00000432907 LAS1LQ9Y4W2 734 aaKnown RBP13.98□□□□□ -0.17
PKNOX1-203ENST00000432907 TONSLQ96HA7 1378 aa13.95□□□□□ -0.18
PKNOX1-203ENST00000432907 MRS2Q9HD23 443 aa13.95□□□□□ -0.18
PKNOX1-203ENST00000432907 SALL2Q9Y467 1007 aaPredicted RBP13.94□□□□□ -0.18
PKNOX1-203ENST00000432907 PPP4R2Q9NY27 417 aa13.91□□□□□ -0.18
PKNOX1-203ENST00000432907 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.18
PKNOX1-203ENST00000432907 HIRIP3Q9BW71 556 aaPredicted RBP13.88□□□□□ -0.19
PKNOX1-203ENST00000432907 BECN1Q14457 450 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms