RNA–Protein interactions for RNA: ENST00000328867.8

CAPN12-201, Transcript of calpain 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN12, Length 2,762 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-201ENST00000328867 NISCHQ9Y2I1 1504 aa38.66■■■■□ 3.78
CAPN12-201ENST00000328867 HRCP23327 699 aa33.57■■■□□ 2.96
CAPN12-201ENST00000328867 CCDC180Q9P1Z9 1646 aa33.08■■■□□ 2.89
CAPN12-201ENST00000328867 PELP1Q8IZL8 1130 aaKnown RBP32.84■■■□□ 2.85
CAPN12-201ENST00000328867 ZCCHC6Q5VYS8 1495 aaKnown RBP32.71■■■□□ 2.83
CAPN12-201ENST00000328867 PCGF6Q9BYE7 350 aa32.64■■■□□ 2.82
CAPN12-201ENST00000328867 SHROOM4Q9ULL8 1493 aa32.63■■■□□ 2.81
CAPN12-201ENST00000328867 SUPT5HO00267 1087 aaKnown RBP32.63■■■□□ 2.81
CAPN12-201ENST00000328867 PPARGC1BQ86YN6 1023 aaKnown RBP32.58■■■□□ 2.81
CAPN12-201ENST00000328867 MYO15BQ96JP2 1530 aa32.5■■■□□ 2.79
CAPN12-201ENST00000328867 CHIC1Q5VXU3 224 aa32.34■■■□□ 2.77
CAPN12-201ENST00000328867 DCAF1Q9Y4B6 1507 aa32.15■■■□□ 2.74
CAPN12-201ENST00000328867 TRIM26Q12899 539 aaPredicted RBP31.77■■■□□ 2.68
CAPN12-201ENST00000328867 ZEB1P37275 1124 aaPredicted RBP31.72■■■□□ 2.67
CAPN12-201ENST00000328867 SCAF1Q9H7N4 1312 aaKnown RBP31.71■■■□□ 2.67
CAPN12-201ENST00000328867 MYT1Q01538 1121 aa31.7■■■□□ 2.67
CAPN12-201ENST00000328867 DCAF8L2P0C7V8 631 aa31.69■■■□□ 2.66
CAPN12-201ENST00000328867 LOC105371045A0A1W2PR82 267 aa31.42■■■□□ 2.62
CAPN12-201ENST00000328867 ACIN1Q9UKV3 1341 aaKnown RBP31.01■■■□□ 2.56
CAPN12-201ENST00000328867 ABCC9O60706 1549 aa30.85■■■□□ 2.53
CAPN12-201ENST00000328867 NEUROD1Q13562 356 aa30.8■■■□□ 2.52
CAPN12-201ENST00000328867 SCRIBQ14160 1630 aa30.75■■■□□ 2.51
CAPN12-201ENST00000328867 CENPBP07199 599 aaPredicted RBP30.69■■■□□ 2.5
CAPN12-201ENST00000328867 GTF3C3Q9Y5Q9 886 aa30.66■■■□□ 2.5
CAPN12-201ENST00000328867 NACADO15069 1562 aa30.55■■■□□ 2.48
CAPN12-201ENST00000328867 RSF1Q96T23 1441 aaPredicted RBP30.48■■■□□ 2.47
CAPN12-201ENST00000328867 DIEXFQ68CQ4 756 aaKnown RBP30.37■■■□□ 2.45
CAPN12-201ENST00000328867 TRIM41Q8WV44 630 aa30.32■■■□□ 2.44
CAPN12-201ENST00000328867 CCER1Q8TC90 406 aaPredicted RBP30.25■■■□□ 2.43
CAPN12-201ENST00000328867 RB1CC1Q8TDY2 1594 aa30.2■■■□□ 2.43
CAPN12-201ENST00000328867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.18■■■□□ 2.42
CAPN12-201ENST00000328867 FAM9AQ8IZU1 332 aaPredicted RBP30.1■■■□□ 2.41
CAPN12-201ENST00000328867 CECR2Q9BXF3 1484 aa30.04■■■□□ 2.4
CAPN12-201ENST00000328867 MROH2BQ7Z745 1585 aa29.98■■■□□ 2.39
CAPN12-201ENST00000328867 ZNF316A6NFI3 1004 aaPredicted RBP29.82■■■□□ 2.36
CAPN12-201ENST00000328867 WIZO95785 1651 aa29.81■■■□□ 2.36
CAPN12-201ENST00000328867 EHMT2Q96KQ7 1210 aa29.8■■■□□ 2.36
CAPN12-201ENST00000328867 TTBK1Q5TCY1 1321 aaPredicted RBP29.8■■■□□ 2.36
CAPN12-201ENST00000328867 BAZ1AQ9NRL2 1556 aaPredicted RBP29.73■■■□□ 2.35
CAPN12-201ENST00000328867 YTHDC1Q96MU7 727 aaKnown RBP29.7■■■□□ 2.34
CAPN12-201ENST00000328867 UNC13AQ9UPW8 1703 aa29.59■■■□□ 2.33
CAPN12-201ENST00000328867 WRNQ14191 1432 aaPredicted RBP eCLIP29.53■■■□□ 2.32
CAPN12-201ENST00000328867 MIER1Q8N108 512 aa29.52■■■□□ 2.32
CAPN12-201ENST00000328867 CLSPNQ9HAW4 1339 aa29.5■■■□□ 2.31
CAPN12-201ENST00000328867 EIF4G1Q04637 1599 aaKnown RBP29.49■■■□□ 2.31
CAPN12-201ENST00000328867 SMARCA4P51532 1647 aa29.49■■■□□ 2.31
CAPN12-201ENST00000328867 TOP2AP11388 1531 aaKnown RBP29.44■■■□□ 2.3
CAPN12-201ENST00000328867 ANP32EQ9BTT0 268 aa29.33■■■□□ 2.29
CAPN12-201ENST00000328867 BCL11AQ9H165 835 aa29.27■■■□□ 2.28
CAPN12-201ENST00000328867 SMARCA2P51531 1590 aa29.25■■■□□ 2.27
CAPN12-201ENST00000328867 CCDC88BA6NC98 1476 aa29.22■■■□□ 2.27
CAPN12-201ENST00000328867 SUPT16HQ9Y5B9 1047 aaKnown RBP29.21■■■□□ 2.27
CAPN12-201ENST00000328867 BICRAQ9NZM4 1560 aa29.21■■■□□ 2.27
CAPN12-201ENST00000328867 CEP162Q5TB80 1403 aa29.18■■■□□ 2.26
CAPN12-201ENST00000328867 TSHZ2Q9NRE2 1034 aa29.12■■■□□ 2.25
CAPN12-201ENST00000328867 TNIKQ9UKE5 1360 aa29.06■■■□□ 2.24
CAPN12-201ENST00000328867 ABCC8Q09428 1581 aa29.04■■■□□ 2.24
CAPN12-201ENST00000328867 PEG3Q9GZU2 1588 aa29.02■■■□□ 2.24
CAPN12-201ENST00000328867 PABPN1Q86U42 306 aaKnown RBP eCLIP28.98■■■□□ 2.233e-7■■■■□ 23
CAPN12-201ENST00000328867 CSRNP3Q8WYN3 585 aa28.88■■■□□ 2.21
CAPN12-201ENST00000328867 HNRNPUL2Q1KMD3 747 aaKnown RBP28.82■■■□□ 2.2
CAPN12-201ENST00000328867 EEA1Q15075 1411 aa28.81■■■□□ 2.2
CAPN12-201ENST00000328867 SOGA1O94964 1423 aa28.73■■■□□ 2.19
CAPN12-201ENST00000328867 ATAD2BQ9ULI0 1458 aa28.71■■■□□ 2.19
CAPN12-201ENST00000328867 UBTFP17480 764 aaKnown RBP28.7■■■□□ 2.19
CAPN12-201ENST00000328867 GOLGA3Q08378 1498 aa28.66■■■□□ 2.18
CAPN12-201ENST00000328867 BAZ1BQ9UIG0 1483 aaKnown RBP28.62■■■□□ 2.17
CAPN12-201ENST00000328867 RUSC2Q8N2Y8 1516 aa28.58■■■□□ 2.17
CAPN12-201ENST00000328867 SYNJ1O43426 1573 aa28.52■■■□□ 2.16
CAPN12-201ENST00000328867 DHX57Q6P158 1386 aaKnown RBP28.44■■■□□ 2.14
CAPN12-201ENST00000328867 RBM19Q9Y4C8 960 aaKnown RBP28.43■■■□□ 2.14
CAPN12-201ENST00000328867 VPS8Q8N3P4 1428 aa28.42■■■□□ 2.14
CAPN12-201ENST00000328867 APLP2Q06481 763 aa28.41■■■□□ 2.14
CAPN12-201ENST00000328867 BCANQ96GW7 911 aa28.39■■■□□ 2.13
CAPN12-201ENST00000328867 CLIP1P30622 1438 aa28.38■■■□□ 2.13
CAPN12-201ENST00000328867 FKBP8Q14318 412 aa28.38■■■□□ 2.13
CAPN12-201ENST00000328867 KIF21BO75037 1637 aa28.37■■■□□ 2.13
CAPN12-201ENST00000328867 CEP164Q9UPV0 1460 aa28.37■■■□□ 2.13
CAPN12-201ENST00000328867 HMGXB3Q12766 1538 aa28.27■■■□□ 2.12
CAPN12-201ENST00000328867 NEFLP07196 543 aa28.27■■■□□ 2.12
CAPN12-201ENST00000328867 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
CAPN12-201ENST00000328867 NCAPD3P42695 1498 aa28.23■■■□□ 2.11
CAPN12-201ENST00000328867 KCNH8Q96L42 1107 aa28.21■■■□□ 2.11
CAPN12-201ENST00000328867 BIVM-ERCC5R4GMW8 1640 aa28.19■■■□□ 2.1
CAPN12-201ENST00000328867 MSH5O43196 834 aa28.12■■■□□ 2.09
CAPN12-201ENST00000328867 FANCIQ9NVI1 1328 aa28.1■■■□□ 2.09
CAPN12-201ENST00000328867 MYT1LQ9UL68 1186 aa28.09■■■□□ 2.09
CAPN12-201ENST00000328867 RAPGEF2Q9Y4G8 1499 aa28.07■■■□□ 2.08
CAPN12-201ENST00000328867 PRKCSHP14314 528 aaPredicted RBP28.06■■■□□ 2.08
CAPN12-201ENST00000328867 CUX2O14529 1486 aa28.04■■■□□ 2.08
CAPN12-201ENST00000328867 ERICH6Q7L0X2 663 aa28.01■■■□□ 2.07
CAPN12-201ENST00000328867 ITGAEP38570 1179 aa27.97■■■□□ 2.07
CAPN12-201ENST00000328867 RRBP1Q9P2E9 1410 aaKnown RBP27.95■■■□□ 2.07
CAPN12-201ENST00000328867 ERICH3Q5RHP9 1530 aa27.95■■■□□ 2.06
CAPN12-201ENST00000328867 CFTRP13569 1480 aa27.94■■■□□ 2.06
CAPN12-201ENST00000328867 CUX1P39880 1505 aa27.94■■■□□ 2.06
CAPN12-201ENST00000328867 CCER2I3L3R5 266 aa27.93■■■□□ 2.06
CAPN12-201ENST00000328867 PRXQ9BXM0 1461 aa27.9■■■□□ 2.06
CAPN12-201ENST00000328867 DDX10Q13206 875 aaKnown RBP27.88■■■□□ 2.05
CAPN12-201ENST00000328867 CDK11AQ9UQ88 783 aaPredicted RBP27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms