RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 NISCHQ9Y2I1 1504 aa37.04■■■■□ 3.52
TRIM50-201ENST00000333149 CCDC180Q9P1Z9 1646 aa32.25■■■□□ 2.75
TRIM50-201ENST00000333149 ZCCHC6Q5VYS8 1495 aaKnown RBP31.38■■■□□ 2.61
TRIM50-201ENST00000333149 SHROOM4Q9ULL8 1493 aa31.31■■■□□ 2.6
TRIM50-201ENST00000333149 SUPT5HO00267 1087 aaKnown RBP30.82■■■□□ 2.52
TRIM50-201ENST00000333149 ABCC9O60706 1549 aa30.7■■■□□ 2.51
TRIM50-201ENST00000333149 DCAF8L2P0C7V8 631 aa30.65■■■□□ 2.5
TRIM50-201ENST00000333149 DCAF1Q9Y4B6 1507 aa30.56■■■□□ 2.48
TRIM50-201ENST00000333149 MYO15BQ96JP2 1530 aa30.24■■■□□ 2.43
TRIM50-201ENST00000333149 CHIC1Q5VXU3 224 aa30.23■■■□□ 2.43
TRIM50-201ENST00000333149 NACADO15069 1562 aa30.11■■■□□ 2.41
TRIM50-201ENST00000333149 RB1CC1Q8TDY2 1594 aa29.88■■■□□ 2.37
TRIM50-201ENST00000333149 SCRIBQ14160 1630 aa29.66■■■□□ 2.34
TRIM50-201ENST00000333149 HRCP23327 699 aa29.56■■■□□ 2.32
TRIM50-201ENST00000333149 RSF1Q96T23 1441 aaPredicted RBP29.33■■■□□ 2.29
TRIM50-201ENST00000333149 PCGF6Q9BYE7 350 aa29.28■■■□□ 2.28
TRIM50-201ENST00000333149 UNC13AQ9UPW8 1703 aa29.26■■■□□ 2.27
TRIM50-201ENST00000333149 LOC105371045A0A1W2PR82 267 aa29.2■■■□□ 2.26
TRIM50-201ENST00000333149 BICRAQ9NZM4 1560 aa28.99■■■□□ 2.23
TRIM50-201ENST00000333149 PABPN1Q86U42 306 aaKnown RBP eCLIP28.96■■■□□ 2.23
TRIM50-201ENST00000333149 TRIM26Q12899 539 aaPredicted RBP28.88■■■□□ 2.21
TRIM50-201ENST00000333149 TRIM41Q8WV44 630 aa28.82■■■□□ 2.2
TRIM50-201ENST00000333149 CECR2Q9BXF3 1484 aa28.76■■■□□ 2.2
TRIM50-201ENST00000333149 MROH2BQ7Z745 1585 aa28.72■■■□□ 2.19
TRIM50-201ENST00000333149 PPARGC1BQ86YN6 1023 aaKnown RBP28.69■■■□□ 2.18
TRIM50-201ENST00000333149 WIZO95785 1651 aa28.55■■■□□ 2.16
TRIM50-201ENST00000333149 BAZ1AQ9NRL2 1556 aaPredicted RBP28.53■■■□□ 2.16
TRIM50-201ENST00000333149 SMARCA4P51532 1647 aa28.42■■■□□ 2.14
TRIM50-201ENST00000333149 FAM9AQ8IZU1 332 aaPredicted RBP28.4■■■□□ 2.14
TRIM50-201ENST00000333149 ZEB1P37275 1124 aaPredicted RBP28.4■■■□□ 2.14
TRIM50-201ENST00000333149 EIF4G1Q04637 1599 aaKnown RBP28.38■■■□□ 2.13
TRIM50-201ENST00000333149 TOP2AP11388 1531 aaKnown RBP28.21■■■□□ 2.11
TRIM50-201ENST00000333149 PEG3Q9GZU2 1588 aa28.08■■■□□ 2.09
TRIM50-201ENST00000333149 CCDC88BA6NC98 1476 aa28.03■■■□□ 2.08
TRIM50-201ENST00000333149 SMARCA2P51531 1590 aa28.03■■■□□ 2.08
TRIM50-201ENST00000333149 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
TRIM50-201ENST00000333149 EHMT2Q96KQ7 1210 aa27.99■■■□□ 2.07
TRIM50-201ENST00000333149 ABCC8Q09428 1581 aa27.9■■■□□ 2.06
TRIM50-201ENST00000333149 WRNQ14191 1432 aaPredicted RBP eCLIP27.85■■■□□ 2.05
TRIM50-201ENST00000333149 BAZ1BQ9UIG0 1483 aaKnown RBP27.84■■■□□ 2.05
TRIM50-201ENST00000333149 NCAPD3P42695 1498 aa27.82■■■□□ 2.04
TRIM50-201ENST00000333149 EEA1Q15075 1411 aa27.8■■■□□ 2.04
TRIM50-201ENST00000333149 CC2D2AQ9P2K1 1620 aa27.76■■■□□ 2.03
TRIM50-201ENST00000333149 TNIKQ9UKE5 1360 aa27.73■■■□□ 2.03
TRIM50-201ENST00000333149 HMGXB3Q12766 1538 aa27.73■■■□□ 2.03
TRIM50-201ENST00000333149 SOGA1O94964 1423 aa27.7■■■□□ 2.02
TRIM50-201ENST00000333149 CEP162Q5TB80 1403 aa27.68■■■□□ 2.02
TRIM50-201ENST00000333149 CSRNP3Q8WYN3 585 aa27.62■■■□□ 2.01
TRIM50-201ENST00000333149 RUSC2Q8N2Y8 1516 aa27.54■■■□□ 2
TRIM50-201ENST00000333149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.51■■■□□ 2
TRIM50-201ENST00000333149 CCER1Q8TC90 406 aaPredicted RBP27.5■■□□□ 1.99
TRIM50-201ENST00000333149 GOLGA3Q08378 1498 aa27.5■■□□□ 1.99
TRIM50-201ENST00000333149 UBTFP17480 764 aaKnown RBP27.38■■□□□ 1.97
TRIM50-201ENST00000333149 KIF21BO75037 1637 aa27.37■■□□□ 1.97
TRIM50-201ENST00000333149 SYNJ1O43426 1573 aa27.36■■□□□ 1.97
TRIM50-201ENST00000333149 CEP164Q9UPV0 1460 aa27.35■■□□□ 1.97
TRIM50-201ENST00000333149 DNAJC5BQ9UF47 199 aa27.31■■□□□ 1.96
TRIM50-201ENST00000333149 SCAF1Q9H7N4 1312 aaKnown RBP27.22■■□□□ 1.95
TRIM50-201ENST00000333149 TTBK1Q5TCY1 1321 aaPredicted RBP27.16■■□□□ 1.94
TRIM50-201ENST00000333149 CFTRP13569 1480 aa27.15■■□□□ 1.94
TRIM50-201ENST00000333149 CLIP1P30622 1438 aa27.14■■□□□ 1.94
TRIM50-201ENST00000333149 CADPSQ9ULU8 1353 aa27.11■■□□□ 1.93
TRIM50-201ENST00000333149 TOP2BQ02880 1626 aa27.1■■□□□ 1.93
TRIM50-201ENST00000333149 VPS8Q8N3P4 1428 aa27.1■■□□□ 1.93
TRIM50-201ENST00000333149 DIEXFQ68CQ4 756 aaKnown RBP27.09■■□□□ 1.93
TRIM50-201ENST00000333149 RAPGEF2Q9Y4G8 1499 aa27.04■■□□□ 1.92
TRIM50-201ENST00000333149 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
TRIM50-201ENST00000333149 PELP1Q8IZL8 1130 aaKnown RBP27.02■■□□□ 1.92
TRIM50-201ENST00000333149 ACIN1Q9UKV3 1341 aaKnown RBP27■■□□□ 1.91
TRIM50-201ENST00000333149 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
TRIM50-201ENST00000333149 ERICH3Q5RHP9 1530 aa26.93■■□□□ 1.9
TRIM50-201ENST00000333149 ZNF316A6NFI3 1004 aaPredicted RBP26.92■■□□□ 1.9
TRIM50-201ENST00000333149 NESP48681 1621 aa26.9■■□□□ 1.9
TRIM50-201ENST00000333149 PRXQ9BXM0 1461 aa26.89■■□□□ 1.89
TRIM50-201ENST00000333149 NEUROD1Q13562 356 aa26.88■■□□□ 1.89
TRIM50-201ENST00000333149 LAMC3Q9Y6N6 1575 aa26.87■■□□□ 1.89
TRIM50-201ENST00000333149 APLP2Q06481 763 aa26.85■■□□□ 1.89
TRIM50-201ENST00000333149 CENPBP07199 599 aaPredicted RBP26.83■■□□□ 1.89
TRIM50-201ENST00000333149 HNRNPUL2Q1KMD3 747 aaKnown RBP26.81■■□□□ 1.88
TRIM50-201ENST00000333149 FANCD2Q9BXW9 1451 aa26.78■■□□□ 1.88
TRIM50-201ENST00000333149 CUX1P39880 1505 aa26.75■■□□□ 1.87
TRIM50-201ENST00000333149 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
TRIM50-201ENST00000333149 PDS5BQ9NTI5 1447 aa26.7■■□□□ 1.86
TRIM50-201ENST00000333149 KIF27Q86VH2 1401 aa26.67■■□□□ 1.86
TRIM50-201ENST00000333149 CLSPNQ9HAW4 1339 aa26.66■■□□□ 1.86
TRIM50-201ENST00000333149 GTF3C3Q9Y5Q9 886 aa26.6■■□□□ 1.85
TRIM50-201ENST00000333149 RANGAP1P46060 587 aaPredicted RBP26.57■■□□□ 1.84
TRIM50-201ENST00000333149 RRBP1Q9P2E9 1410 aaKnown RBP26.55■■□□□ 1.84
TRIM50-201ENST00000333149 KIF21AQ7Z4S6 1674 aa26.54■■□□□ 1.84
TRIM50-201ENST00000333149 DHX57Q6P158 1386 aaKnown RBP26.51■■□□□ 1.83
TRIM50-201ENST00000333149 KANK4Q5T7N3 995 aaPredicted RBP26.5■■□□□ 1.83
TRIM50-201ENST00000333149 DNMBPQ6XZF7 1577 aa26.49■■□□□ 1.83
TRIM50-201ENST00000333149 TOPBP1Q92547 1522 aa26.47■■□□□ 1.83
TRIM50-201ENST00000333149 ARHGAP35Q9NRY4 1499 aa26.47■■□□□ 1.83
TRIM50-201ENST00000333149 MIER1Q8N108 512 aa26.47■■□□□ 1.83
TRIM50-201ENST00000333149 CUX2O14529 1486 aa26.47■■□□□ 1.83
TRIM50-201ENST00000333149 URB2Q14146 1524 aaKnown RBP26.45■■□□□ 1.83
TRIM50-201ENST00000333149 FGD5Q6ZNL6 1462 aa26.43■■□□□ 1.82
TRIM50-201ENST00000333149 IGF1RP08069 1367 aa26.38■■□□□ 1.81
TRIM50-201ENST00000333149 MAP3K1Q13233 1512 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms