RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 NISCHQ9Y2I1 1504 aa35.1■■■■□ 3.21
OTUB1-204ENST00000447683 CCDC180Q9P1Z9 1646 aa30.22■■■□□ 2.43
OTUB1-204ENST00000447683 ZCCHC6Q5VYS8 1495 aaKnown RBP29.63■■■□□ 2.33
OTUB1-204ENST00000447683 SHROOM4Q9ULL8 1493 aa29.22■■■□□ 2.27
OTUB1-204ENST00000447683 DCAF1Q9Y4B6 1507 aa28.98■■■□□ 2.23
OTUB1-204ENST00000447683 DCAF8L2P0C7V8 631 aa28.77■■■□□ 2.2
OTUB1-204ENST00000447683 SUPT5HO00267 1087 aaKnown RBP28.48■■■□□ 2.15
OTUB1-204ENST00000447683 MYO15BQ96JP2 1530 aa28.34■■■□□ 2.13
OTUB1-204ENST00000447683 NACADO15069 1562 aa27.96■■■□□ 2.07
OTUB1-204ENST00000447683 ABCC9O60706 1549 aa27.96■■■□□ 2.07
OTUB1-204ENST00000447683 SCRIBQ14160 1630 aa27.95■■■□□ 2.06
OTUB1-204ENST00000447683 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
OTUB1-204ENST00000447683 RB1CC1Q8TDY2 1594 aa27.54■■■□□ 2
OTUB1-204ENST00000447683 RSF1Q96T23 1441 aaPredicted RBP27.54■■■□□ 2
OTUB1-204ENST00000447683 CECR2Q9BXF3 1484 aa27.26■■□□□ 1.95
OTUB1-204ENST00000447683 MROH2BQ7Z745 1585 aa27.18■■□□□ 1.94
OTUB1-204ENST00000447683 UNC13AQ9UPW8 1703 aa27.14■■□□□ 1.93
OTUB1-204ENST00000447683 WIZO95785 1651 aa27.02■■□□□ 1.92
OTUB1-204ENST00000447683 BAZ1AQ9NRL2 1556 aaPredicted RBP27.01■■□□□ 1.91
OTUB1-204ENST00000447683 SMARCA4P51532 1647 aa26.83■■□□□ 1.89
OTUB1-204ENST00000447683 BICRAQ9NZM4 1560 aa26.78■■□□□ 1.88
OTUB1-204ENST00000447683 TOP2AP11388 1531 aaKnown RBP26.69■■□□□ 1.86
OTUB1-204ENST00000447683 TRIM41Q8WV44 630 aa26.68■■□□□ 1.86
OTUB1-204ENST00000447683 LOC105371045A0A1W2PR82 267 aa26.67■■□□□ 1.86
OTUB1-204ENST00000447683 EIF4G1Q04637 1599 aaKnown RBP26.61■■□□□ 1.85
OTUB1-204ENST00000447683 PABPN1Q86U42 306 aaKnown RBP eCLIP26.54■■□□□ 1.841e-6■■■■□ 24.5
OTUB1-204ENST00000447683 SMARCA2P51531 1590 aa26.5■■□□□ 1.83
OTUB1-204ENST00000447683 CCDC88BA6NC98 1476 aa26.47■■□□□ 1.83
OTUB1-204ENST00000447683 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.82
OTUB1-204ENST00000447683 FAM9AQ8IZU1 332 aaPredicted RBP26.26■■□□□ 1.79
OTUB1-204ENST00000447683 PCGF6Q9BYE7 350 aa26.22■■□□□ 1.79
OTUB1-204ENST00000447683 ATAD2BQ9ULI0 1458 aa26.19■■□□□ 1.78
OTUB1-204ENST00000447683 ABCC8Q09428 1581 aa26.18■■□□□ 1.78
OTUB1-204ENST00000447683 HRCP23327 699 aa26.08■■□□□ 1.77
OTUB1-204ENST00000447683 BAZ1BQ9UIG0 1483 aaKnown RBP26.07■■□□□ 1.76
OTUB1-204ENST00000447683 TRIM26Q12899 539 aaPredicted RBP25.99■■□□□ 1.75
OTUB1-204ENST00000447683 EHMT2Q96KQ7 1210 aa25.88■■□□□ 1.73
OTUB1-204ENST00000447683 WRNQ14191 1432 aaPredicted RBP eCLIP25.87■■□□□ 1.73
OTUB1-204ENST00000447683 EEA1Q15075 1411 aa25.87■■□□□ 1.73
OTUB1-204ENST00000447683 PELP1Q8IZL8 1130 aaKnown RBP25.85■■□□□ 1.73
OTUB1-204ENST00000447683 HMGXB3Q12766 1538 aa25.84■■□□□ 1.73
OTUB1-204ENST00000447683 SOGA1O94964 1423 aa25.84■■□□□ 1.73
OTUB1-204ENST00000447683 NCAPD3P42695 1498 aa25.83■■□□□ 1.72
OTUB1-204ENST00000447683 SYNJ1O43426 1573 aa25.77■■□□□ 1.72
OTUB1-204ENST00000447683 RUSC2Q8N2Y8 1516 aa25.73■■□□□ 1.71
OTUB1-204ENST00000447683 CSRNP3Q8WYN3 585 aa25.7■■□□□ 1.7
OTUB1-204ENST00000447683 TNIKQ9UKE5 1360 aa25.65■■□□□ 1.7
OTUB1-204ENST00000447683 TOP2BQ02880 1626 aa25.58■■□□□ 1.69
OTUB1-204ENST00000447683 CEP162Q5TB80 1403 aa25.58■■□□□ 1.69
OTUB1-204ENST00000447683 GOLGA3Q08378 1498 aa25.57■■□□□ 1.68
OTUB1-204ENST00000447683 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
OTUB1-204ENST00000447683 KIF21BO75037 1637 aa25.53■■□□□ 1.68
OTUB1-204ENST00000447683 CEP164Q9UPV0 1460 aa25.49■■□□□ 1.67
OTUB1-204ENST00000447683 CFTRP13569 1480 aa25.47■■□□□ 1.67
OTUB1-204ENST00000447683 UBTFP17480 764 aaKnown RBP25.43■■□□□ 1.66
OTUB1-204ENST00000447683 PRDM2Q13029 1718 aa25.41■■□□□ 1.66
OTUB1-204ENST00000447683 PPARGC1BQ86YN6 1023 aaKnown RBP25.4■■□□□ 1.66
OTUB1-204ENST00000447683 MYT1Q01538 1121 aa25.36■■□□□ 1.65
OTUB1-204ENST00000447683 CUX1P39880 1505 aa25.36■■□□□ 1.65
OTUB1-204ENST00000447683 CC2D2AQ9P2K1 1620 aa25.32■■□□□ 1.64
OTUB1-204ENST00000447683 ZEB1P37275 1124 aaPredicted RBP25.31■■□□□ 1.64
OTUB1-204ENST00000447683 RAPGEF2Q9Y4G8 1499 aa25.27■■□□□ 1.64
OTUB1-204ENST00000447683 CADPSQ9ULU8 1353 aa25.22■■□□□ 1.63
OTUB1-204ENST00000447683 ERICH3Q5RHP9 1530 aa25.2■■□□□ 1.63
OTUB1-204ENST00000447683 CLIP1P30622 1438 aa25.2■■□□□ 1.62
OTUB1-204ENST00000447683 PRXQ9BXM0 1461 aa25.19■■□□□ 1.62
OTUB1-204ENST00000447683 KIF27Q86VH2 1401 aa25.13■■□□□ 1.61
OTUB1-204ENST00000447683 VPS8Q8N3P4 1428 aa25.09■■□□□ 1.61
OTUB1-204ENST00000447683 TTBK1Q5TCY1 1321 aaPredicted RBP24.98■■□□□ 1.59
OTUB1-204ENST00000447683 FANCD2Q9BXW9 1451 aa24.95■■□□□ 1.59
OTUB1-204ENST00000447683 FGD5Q6ZNL6 1462 aa24.94■■□□□ 1.58
OTUB1-204ENST00000447683 CUX2O14529 1486 aa24.92■■□□□ 1.58
OTUB1-204ENST00000447683 ARAP1Q96P48 1450 aa24.88■■□□□ 1.57
OTUB1-204ENST00000447683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.88■■□□□ 1.57
OTUB1-204ENST00000447683 IGF1RP08069 1367 aa24.87■■□□□ 1.57
OTUB1-204ENST00000447683 DNMBPQ6XZF7 1577 aa24.86■■□□□ 1.57
OTUB1-204ENST00000447683 CCER1Q8TC90 406 aaPredicted RBP24.83■■□□□ 1.57
OTUB1-204ENST00000447683 RANGAP1P46060 587 aaPredicted RBP24.83■■□□□ 1.56
OTUB1-204ENST00000447683 APLP2Q06481 763 aa24.81■■□□□ 1.56
OTUB1-204ENST00000447683 NESP48681 1621 aa24.81■■□□□ 1.56
OTUB1-204ENST00000447683 LAMC3Q9Y6N6 1575 aa24.81■■□□□ 1.56
OTUB1-204ENST00000447683 TOPBP1Q92547 1522 aa24.78■■□□□ 1.56
OTUB1-204ENST00000447683 CARMIL1Q5VZK9 1371 aa24.74■■□□□ 1.55
OTUB1-204ENST00000447683 ARHGAP35Q9NRY4 1499 aa24.74■■□□□ 1.55
OTUB1-204ENST00000447683 ABCA10Q8WWZ4 1543 aa24.73■■□□□ 1.55
OTUB1-204ENST00000447683 POLA1P09884 1462 aaPredicted RBP24.72■■□□□ 1.55
OTUB1-204ENST00000447683 RAD54L2Q9Y4B4 1467 aa24.67■■□□□ 1.54
OTUB1-204ENST00000447683 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
OTUB1-204ENST00000447683 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
OTUB1-204ENST00000447683 CUL7Q14999 1698 aa24.58■■□□□ 1.53
OTUB1-204ENST00000447683 PDS5BQ9NTI5 1447 aa24.58■■□□□ 1.53
OTUB1-204ENST00000447683 HNRNPUL2Q1KMD3 747 aaKnown RBP24.56■■□□□ 1.52
OTUB1-204ENST00000447683 KANK4Q5T7N3 995 aaPredicted RBP24.55■■□□□ 1.52
OTUB1-204ENST00000447683 DNAJC5BQ9UF47 199 aa24.53■■□□□ 1.52
OTUB1-204ENST00000447683 KIF21AQ7Z4S6 1674 aa24.52■■□□□ 1.52
OTUB1-204ENST00000447683 MAP3K1Q13233 1512 aa24.51■■□□□ 1.51
OTUB1-204ENST00000447683 ABCA5Q8WWZ7 1642 aa24.48■■□□□ 1.51
OTUB1-204ENST00000447683 RRBP1Q9P2E9 1410 aaKnown RBP24.47■■□□□ 1.51
OTUB1-204ENST00000447683 CTTNBP2Q8WZ74 1663 aa24.45■■□□□ 1.51
OTUB1-204ENST00000447683 TIAM1Q13009 1591 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms